Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0003223

Physical Location & Seq

Genomic Coordinates Reverse (-)

17216111 .. 17221485

Gene Structure 5375 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGATGACGGACTACGAAGGAAGGTACGAAGACAACGGAGAGGACGCTGCCAACTACGCCGACGGTGGGTCCTCTCCTCAACCTCGTGCCGCCAACCATGGCGGTGCCGACGATTACAGCGATTCCAAATCTCAGCATGAATATCATGATTATGAGAGAGAATCTTCAAAGAGCAGAGAAAAGGATAGAGATAAAGGGCGTGATAAGGAGAAGGACAGAGATAGGGATAGGGACAGGGACAGGGACAGGGACAGAGACAGGGGGAGAAGCAAGGACAAGGATAGGGACAGGGACAGAGATAGGGCTAGGGATAGGGATAGGAATCGGGATAGAGAAAGAGAAAGGGACCGAGACAGGGATCGTGATCGTCATCACAGAGACCGCCACAGGGATCGTGAAAGAAGTGAGCGACGGAGAGATAAGGACGACGACGATGATGATCACTACCGTACCCGGGACTCTGATAGGCGGAGGGATCATGACAAAGACAGAGAGGATAGGCACAGGCGCAAGTCGCGGTCTCGTTCAAGGGGTAGATCTGAGCACAAATCCAGATCAAGGTCACGTTCTCGTTCACGCTCAAAAAGCAAAAGGATCAGTGGTTTCGACATGGCACCTCCTGCTTCTGCAATGTTAGCTGGTGCTGCCATTGCTGCAGCAGGGCAAATTTCTGGGAATAGTCCTACCATTCCGGGGATGTTTCCAAACATGTTTCCTTTGTCGACCGGGCAGCAGTTTGCACCCCTTCCAGTTATGCCTGTTCAGGCGATGACTCAACAGGCTACTAGGCATGCCCGACGGGTGTATGTTGGAGGGCTCCCCCCCACAGCAAATGAACAGTCAGTTGCTACATTTTTCAGCCAAGTTATGGCTGCAATTGGAGGGAACACTGCTGGCCCAGGAGATGCTGTCGTCAATGTTTACATAAACCATGAAAAGAAATTTGCTTTTGTGGAGATGAGATCGGTTGAAGAGGCTAGCAATGCAATGGCTCTGGATGGAATTATTTTTGAGGGAGCCCCTGTTAAGGTGCGGAGACCTAGCGATTACAACCCATCTCTGGCTGCAACACTCGGCCCAAGCCAGCCCAATCCCAATCTGAACCTGGCTGCTGTGGGGCTTACACCGGGTTCTGCTGGTGGGCTTGAGGGCCCTGACCGCATATTTGTTGGTGGGCTGCCATATTACTTCACAGAAGCACAGATCAAGGAATTACTTGAATCCTTTGGACCTCTTCGTGGTTTTGATTTGGTGAAAGACAGGGAAACAGGAAACTCAAAAGGCTATGCCTTTTGTGTTTACCAAGATCGATCAGTTACAGACATAGCTTGTGCAGCGCTGAACGGCATTAAAATGGGGGACAAGACGCTCACAGTTAGGCGTGCTAACCAAGGTGCCAACCAGCCCAAACCTGAGCAAGAGAGTGTTCTGTTGCATGCACAGCAGCAAATTGCATTGCAGAGGTTCATGCTGTTGCAACCGCCTAGTTCTGTTGCCACCAAGGTTGTATGTTTAACTCAGGTAGTAACTGCAGATGAGCTTAGGGACGATACTGAGTATGATGATATCTTGGAAGACATGAGGCTTGAAGGTGAAAAGTTTGGTACATTAGTGAATGTCATCATCCCGCGTCCAAGACCAGATGGTGAACTTGCCCCCGGTGTTGGGAAGGTGTTTTTGGAGTATGCGGATACTGAGGGTTCTACAAAAGCCCGTACGGGGTTGAATGGCCGGAAATTTGGTGGCAATCAGGTGGTAGCGGTGTTTTATCCGGAGGACAAGTTTGGTGAGGGCGACTACGAGGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008187 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030628 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0070013 GO:0071004 GO:0071010 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

603

Amino Acids

67.69

Weight (kDa)

7.74

Isoelectric Point (pI)

47.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	388 - 457	7e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60900 AT4G36690 AT4G36690 AT4G36690 AT4G36690
fragaria_vesca	FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g18180
malus_domestica	MD02G1151300.v1.1 MD15G1265800.v1.1
prunus_persica	Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1
pyrus_communis	pycom15g23150
rosa_chinensis	RchiOBHm_Chr2g0102011 RchiOBHm_Chr7g0198161
rosa_laevigata	RLG00000017126
rosa_multiflora	Rmu_co8319619.1_g000001 Rmu_sc0000157.1_g000005 Rmu_sc0001167.1_g000028
rosa_roxburghii	Rroxscaffold_2G00140830
rosa_rugosa	Rorug02G0103800 Rorug02G0103900 Rorug02G0104000
rosa_samantha	Rh2AG152000 Rh2BG157400 Rh2CG157400 Rh2DG157500
rosa_wichuraiana	Rw0G008320 Rw2G011870 Rw4G020950 Rw5G047310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	104, 613, 1394
AccB7I	CCANNNNNTGG	1 cut(s)	868
AccI	GTMKAC	1 cut(s)	722
AccII	CGCG	2 cut(s)	517, 1630
AccIII	TCCGGA	1 cut(s)	1771
AclWI	GGATC	4 cut(s)	366, 399, 483, 602
AcoI	YGGCCR	1 cut(s)	1729
AcsI	RAATTY	3 cut(s)	666, 941, 1736
AfaI	GTAC	4 cut(s)	26, 451, 1606, 1717
AfeI	AGCGCT	1 cut(s)	1338
AflIII	ACRYGT	1 cut(s)	708
AgsI	TTSAA	6 cut(s)	168, 528, 971, 1220, 1589, 1726
AhdI	GACNNNNNGTC	1 cut(s)	67
AjnI	CCWGG	2 cut(s)	898, 1104
AjuI	GAANNNNNNNTTGG	2 cut(s)	1661, 1693
AluBI	AGCT	3 cut(s)	638, 1328, 1540
AluI	AGCT	3 cut(s)	638, 1328, 1540
Alw21I	GWGCWC	1 cut(s)	546
Alw26I	GTCTC	5 cut(s)	249, 345, 372, 525, 1030
AlwI	GGATC	4 cut(s)	366, 399, 483, 602
Ama87I	CYCGRG	1 cut(s)	453
Aor13HI	TCCGGA	1 cut(s)	1771
Aor51HI	AGCGCT	1 cut(s)	1338
AoxI	GGCC	4 cut(s)	895, 1075, 1150, 1729
ApaI	GGGCCC	1 cut(s)	1154
ApoI	RAATTY	3 cut(s)	666, 941, 1736
ArsI	GACNNNNNNTTYG	4 cut(s)	824, 856, 1148, 1180
AspLEI	GCGC	2 cut(s)	510, 1339
AspS9I	GGNCC	7 cut(s)	69, 346, 896, 1076, 1150, 1151, 1229
AsuC2I	CCSGG	6 cut(s)	454, 455, 693, 727, 1128, 1659
AsuHPI	GGTGA	4 cut(s)	1264, 1604, 1658, 1799
AsuNHI	GCTAGC	1 cut(s)	977
AvaI	CYCGRG	1 cut(s)	453
AvaII	GGWCC	3 cut(s)	69, 346, 1229
BaeGI	GKGCMC	1 cut(s)	1154
BaeI	ACNNNNGTAYC	4 cut(s)	433, 466, 1596, 1629
BanI	GGYRCC	3 cut(s)	104, 613, 1394
BanII	GRGCYC	3 cut(s)	819, 1021, 1154
BauI	CACGAG	1 cut(s)	84
BbsI	GAAGAC	2 cut(s)	36, 1581
Bbv12I	GWGCWC	1 cut(s)	546
BccI	CCATC	3 cut(s)	992, 1063, 1637
BceAI	ACGGC	1 cut(s)	1360
BciT130I	CCWGG	2 cut(s)	900, 1106
BciVI	GTATCC	1 cut(s)	1684
BclI	TGATCA	1 cut(s)	439
BcnI	CCSGG	6 cut(s)	454, 455, 693, 727, 1128, 1659
BcoDI	GTCTC	5 cut(s)	249, 345, 372, 525, 1030
BfaI	CTAG	6 cut(s)	306, 786, 978, 1041, 1485, 1807
BfmI	CTRYAG	2 cut(s)	654, 1530
BfoI	RGCGCY	1 cut(s)	1340
BfuI	GTATCC	1 cut(s)	1684
BglII	AGATCT	1 cut(s)	536
Bme1390I	CCNGG	8 cut(s)	454, 455, 693, 727, 900, 1106, 1128, 1659
Bme18I	GGWCC	3 cut(s)	69, 346, 1229
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmeT110I	CYCGRG	1 cut(s)	453
BmgT120I	GGNCC	7 cut(s)	69, 346, 896, 1076, 1150, 1151, 1229
BmiI	GGNNCC	8 cut(s)	70, 106, 347, 615, 818, 1018, 1152, 1396
BmrFI	CCNGG	8 cut(s)	454, 455, 693, 727, 900, 1106, 1128, 1659
BmsI	GCATC	1 cut(s)	895
BmtI	GCTAGC	1 cut(s)	981
BpiI	GAAGAC	2 cut(s)	36, 1581
Bpu10I	CCTNAGC	2 cut(s)	1413, 1541
BpuEI	CTTGAG	1 cut(s)	1166
BpuMI	CCSGG	6 cut(s)	454, 455, 693, 727, 1128, 1659
Bsa29I	ATCGAT	1 cut(s)	1309
BsaBI	GATNNNNATC	4 cut(s)	321, 363, 369, 438
BsaI	GGTCTC	3 cut(s)	372, 525, 1030
BsaJI	CCNNGG	7 cut(s)	97, 453, 692, 898, 1390, 1500, 1657
BsaWI	WCCGGW	1 cut(s)	1771
BsaXI	ACNNNNNCTCC	6 cut(s)	894, 924, 1008, 1038, 1766, 1796
Bse1I	ACTGG	1 cut(s)	749
Bse3DI	GCAATG	5 cut(s)	636, 648, 988, 993, 1454
Bse8I	GATNNNNATC	4 cut(s)	321, 363, 369, 438
BseAI	TCCGGA	1 cut(s)	1771
BseBI	CCWGG	2 cut(s)	900, 1106
BseCI	ATCGAT	1 cut(s)	1309
BseDI	CCNNGG	7 cut(s)	97, 453, 692, 898, 1390, 1500, 1657
BseGI	GGATG	3 cut(s)	702, 1003, 1623
BseJI	GATNNNNATC	4 cut(s)	321, 363, 369, 438
BseMI	GCAATG	5 cut(s)	636, 648, 988, 993, 1454
BseMII	CTCAG	6 cut(s)	146, 531, 1404, 1532, 1545, 1686
BseNI	ACTGG	1 cut(s)	749
BseRI	GAGGAG	1 cut(s)	66
BseSI	GKGCMC	1 cut(s)	1154
BsgI	GTGCAG	1 cut(s)	1353
Bsh1236I	CGCG	2 cut(s)	517, 1630
Bsh1285I	CGRYCG	1 cut(s)	726
BshFI	GGCC	4 cut(s)	897, 1077, 1152, 1731
BshNI	GGYRCC	3 cut(s)	104, 613, 1394
BshVI	ATCGAT	1 cut(s)	1309
BsiEI	CGRYCG	1 cut(s)	726
BsiHKAI	GWGCWC	1 cut(s)	546
BsiHKCI	CYCGRG	1 cut(s)	453
BsiSI	CCGG	7 cut(s)	454, 692, 726, 1127, 1659, 1732, 1772
BsiWI	CGTACG	1 cut(s)	1715
BsmAI	GTCTC	5 cut(s)	249, 345, 372, 525, 1030
BsnI	GGCC	4 cut(s)	897, 1077, 1152, 1731
Bso31I	GGTCTC	3 cut(s)	372, 525, 1030
BsoBI	CYCGRG	1 cut(s)	453
Bsp120I	GGGCCC	1 cut(s)	1150
Bsp1286I	GDGCHC	4 cut(s)	546, 819, 1021, 1154
Bsp13I	TCCGGA	1 cut(s)	1771
Bsp19I	CCATGG	1 cut(s)	97
BspANI	GGCC	4 cut(s)	897, 1077, 1152, 1731
BspCNI	CTCAG	6 cut(s)	145, 532, 1405, 1531, 1546, 1687
BspDI	ATCGAT	1 cut(s)	1309
BspEI	TCCGGA	1 cut(s)	1771
BspFNI	CGCG	2 cut(s)	517, 1630
BspHI	TCATGA	2 cut(s)	145, 478
BspLI	GGNNCC	8 cut(s)	70, 106, 347, 615, 818, 1018, 1152, 1396
BspMAI	CTGCAG	2 cut(s)	658, 1534
BspOI	GCTAGC	1 cut(s)	981
BspPI	GGATC	4 cut(s)	366, 399, 483, 602
BspT107I	GGYRCC	3 cut(s)	104, 613, 1394
BspTNI	GGTCTC	3 cut(s)	372, 525, 1030
BsrDI	GCAATG	5 cut(s)	636, 648, 988, 993, 1454
BsrI	ACTGG	1 cut(s)	749
BssECI	CCNNGG	7 cut(s)	97, 453, 692, 898, 1390, 1500, 1657
BssSI	CACGAG	1 cut(s)	84
BssT1I	CCWWGG	3 cut(s)	97, 1390, 1500
Bst2BI	CACGAG	1 cut(s)	84
Bst2UI	CCWGG	2 cut(s)	900, 1106
Bst4CI	ACNGT	4 cut(s)	65, 449, 840, 1375
Bst6I	CTCTTC	2 cut(s)	966, 1239
BstAPI	GCANNNNNTGC	1 cut(s)	620
BstC8I	GCNNGC	6 cut(s)	792, 895, 979, 1085, 1383, 1437
BstDEI	CTNAG	7 cut(s)	132, 540, 1413, 1518, 1541, 1554, 1695
BstDSI	CCRYGG	1 cut(s)	97
BstF5I	GGATG	3 cut(s)	702, 1003, 1623
BstFNI	CGCG	2 cut(s)	517, 1630
BstH2I	RGCGCY	1 cut(s)	1340
BstHHI	GCGC	2 cut(s)	510, 1339
BstMAI	GTCTC	5 cut(s)	249, 345, 372, 525, 1030
BstMCI	CGRYCG	1 cut(s)	726
BstNI	CCWGG	2 cut(s)	900, 1106
BstNSI	RCATGY	3 cut(s)	712, 794, 1439
BstSCI	CCNGG	8 cut(s)	452, 453, 691, 725, 898, 1104, 1126, 1657
BstSFI	CTRYAG	2 cut(s)	654, 1530
BstSLI	GKGCMC	1 cut(s)	1154
BstUI	CGCG	2 cut(s)	517, 1630
BstV2I	GAAGAC	2 cut(s)	36, 1581
BstX2I	RGATCY	1 cut(s)	536
BstYI	RGATCY	1 cut(s)	536
Bsu15I	ATCGAT	1 cut(s)	1309
BsuI	GTATCC	1 cut(s)	1684
BsuRI	GGCC	4 cut(s)	897, 1077, 1152, 1731
BsuTUI	ATCGAT	1 cut(s)	1309
BtgI	CCRYGG	1 cut(s)	97
BtgZI	GCGATG	1 cut(s)	782
BtsCI	GGATG	3 cut(s)	702, 1003, 1623
BtsI	GCAGTG	1 cut(s)	888
BtsIMutI	CAGTG	2 cut(s)	604, 888
Cac8I	GCNNGC	6 cut(s)	792, 895, 979, 1085, 1383, 1437
CciI	TCATGA	2 cut(s)	145, 478
CfoI	GCGC	2 cut(s)	510, 1339
Cfr13I	GGNCC	7 cut(s)	69, 346, 896, 1076, 1150, 1151, 1229
Cfr9I	CCCGGG	1 cut(s)	453
ClaI	ATCGAT	1 cut(s)	1309
CseI	GACGC	3 cut(s)	53, 1375, 1619
Csp6I	GTAC	4 cut(s)	25, 450, 1605, 1716
CspCI	CAANNNNNGTGG	2 cut(s)	1486, 1521
CviQI	GTAC	4 cut(s)	25, 450, 1605, 1716
DdeI	CTNAG	7 cut(s)	132, 540, 1413, 1518, 1541, 1554, 1695
DriI	GACNNNNNGTC	1 cut(s)	67
EaeI	YGGCCR	1 cut(s)	1729
Eam1104I	CTCTTC	2 cut(s)	966, 1239
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	2 cut(s)	966, 1239
EciI	GGCGGA	1 cut(s)	484
Eco130I	CCWWGG	3 cut(s)	97, 1390, 1500
Eco24I	GRGCYC	3 cut(s)	819, 1021, 1154
Eco31I	GGTCTC	3 cut(s)	372, 525, 1030
Eco32I	GATATC	1 cut(s)	1567
Eco47I	GGWCC	3 cut(s)	69, 346, 1229
Eco47III	AGCGCT	1 cut(s)	1338
Eco88I	CYCGRG	1 cut(s)	453
EcoO109I	RGGNCCY	3 cut(s)	69, 1150, 1151
EcoRII	CCWGG	2 cut(s)	898, 1104
EcoRV	GATATC	1 cut(s)	1567
EcoT14I	CCWWGG	3 cut(s)	97, 1390, 1500
EcoT38I	GRGCYC	3 cut(s)	819, 1021, 1154
ErhI	CCWWGG	3 cut(s)	97, 1390, 1500
FauI	CCCGC	1 cut(s)	1635
FbaI	TGATCA	1 cut(s)	439
FblI	GTMKAC	1 cut(s)	722
FokI	GGATG	3 cut(s)	709, 1010, 1610
FriOI	GRGCYC	3 cut(s)	819, 1021, 1154
FspBI	CTAG	6 cut(s)	306, 786, 978, 1041, 1485, 1807
GlaI	GCGC	2 cut(s)	509, 1338
HaeII	RGCGCY	1 cut(s)	1340
HaeIII	GGCC	4 cut(s)	897, 1077, 1152, 1731
HapII	CCGG	7 cut(s)	454, 692, 726, 1127, 1659, 1732, 1772
HgaI	GACGC	3 cut(s)	53, 1375, 1619
HhaI	GCGC	2 cut(s)	510, 1339
Hin6I	GCGC	2 cut(s)	508, 1337
HinP1I	GCGC	2 cut(s)	508, 1337
HincII	GTYRAC	1 cut(s)	723
HindII	GTYRAC	1 cut(s)	723
HinfI	GANTC	6 cut(s)	122, 161, 322, 458, 772, 1220
HpaII	CCGG	7 cut(s)	454, 692, 726, 1127, 1659, 1732, 1772
HphI	GGTGA	4 cut(s)	1264, 1604, 1658, 1799
Hpy166II	GTNNAC	5 cut(s)	575, 723, 922, 1300, 1649
Hpy188I	TCNGA	3 cut(s)	463, 541, 1101
Hpy188III	TCNNGA	8 cut(s)	146, 326, 362, 395, 479, 552, 995, 1772
Hpy8I	GTNNAC	5 cut(s)	575, 723, 922, 1300, 1649
Hpy99I	CGWCG	6 cut(s)	65, 113, 414, 431, 434, 801
HpyAV	CCTTC	6 cut(s)	11, 15, 205, 755, 1583, 1663
HpyCH4III	ACNGT	4 cut(s)	65, 449, 840, 1375
HpyCH4IV	ACGT	1 cut(s)	565
HpyF3I	CTNAG	7 cut(s)	132, 540, 1413, 1518, 1541, 1554, 1695
HpySE526I	ACGT	1 cut(s)	565
HspAI	GCGC	2 cut(s)	508, 1337
Kpn2I	TCCGGA	1 cut(s)	1771
Ksp22I	TGATCA	1 cut(s)	439
LmnI	GCTCC	2 cut(s)	822, 1016
LweI	GCATC	1 cut(s)	895
MaeI	CTAG	6 cut(s)	306, 786, 978, 1041, 1485, 1807
MaeII	ACGT	1 cut(s)	565
MaeIII	GTNAC	3 cut(s)	561, 1315, 1525
MboII	GAAGA	5 cut(s)	41, 156, 983, 1226, 1586
MfeI	CAATTG	1 cut(s)	876
MflI	RGATCY	1 cut(s)	536
MhlI	GDGCHC	4 cut(s)	546, 819, 1021, 1154
MluCI	AATT	7 cut(s)	666, 876, 941, 1002, 1211, 1449, 1736
MlyI	GAGTC	2 cut(s)	452, 766
MmeI	TCCRAC	1 cut(s)	790
MroI	TCCGGA	1 cut(s)	1771
MseI	TTAA	3 cut(s)	1026, 1350, 1514
MslI	CAYNNNNRTG	3 cut(s)	102, 150, 1352
MspI	CCGG	7 cut(s)	454, 692, 726, 1127, 1659, 1732, 1772
MspR9I	CCNGG	8 cut(s)	454, 455, 693, 727, 900, 1106, 1128, 1659
MunI	CAATTG	1 cut(s)	876
MvaI	CCWGG	2 cut(s)	900, 1106
MvnI	CGCG	2 cut(s)	517, 1630
NciI	CCSGG	6 cut(s)	454, 455, 693, 727, 1128, 1659
NcoI	CCATGG	1 cut(s)	97
NheI	GCTAGC	1 cut(s)	977
NlaIV	GGNNCC	8 cut(s)	70, 106, 347, 615, 818, 1018, 1152, 1396
NmeAIII	GCCGAG	1 cut(s)	1053
NmuCI	GTSAC	1 cut(s)	561
NspI	RCATGY	3 cut(s)	712, 794, 1439
PaeI	GCATGC	2 cut(s)	794, 1439
PagI	TCATGA	2 cut(s)	145, 478
PciI	ACATGT	1 cut(s)	708
PcsI	WCGNNNNNNNCGW	1 cut(s)	117
PfeI	GAWTC	4 cut(s)	122, 161, 322, 1220
Pfl23II	CGTACG	1 cut(s)	1715
PflMI	CCANNNNNTGG	1 cut(s)	868
PleI	GAGTC	2 cut(s)	452, 766
PpsI	GAGTC	2 cut(s)	452, 766
PpuMI	RGGWCCY	1 cut(s)	69
PscI	ACATGT	1 cut(s)	708
Psp5II	RGGWCCY	1 cut(s)	69
Psp6I	CCWGG	2 cut(s)	898, 1104
PspGI	CCWGG	2 cut(s)	898, 1104
PspLI	CGTACG	1 cut(s)	1715
PspN4I	GGNNCC	8 cut(s)	70, 106, 347, 615, 818, 1018, 1152, 1396
PspOMI	GGGCCC	1 cut(s)	1150
PspPI	GGNCC	7 cut(s)	69, 346, 896, 1076, 1150, 1151, 1229
PspPPI	RGGWCCY	1 cut(s)	69
PstI	CTGCAG	2 cut(s)	658, 1534
PsuI	RGATCY	1 cut(s)	536
RsaI	GTAC	4 cut(s)	26, 451, 1606, 1717
RsaNI	GTAC	4 cut(s)	25, 450, 1605, 1716
RseI	CAYNNNNRTG	3 cut(s)	102, 150, 1352
SalI	GTCGAC	1 cut(s)	721
SaqAI	TTAA	3 cut(s)	1026, 1350, 1514
Sau96I	GGNCC	7 cut(s)	69, 346, 896, 1076, 1150, 1151, 1229
SchI	GAGTC	2 cut(s)	452, 766
ScrFI	CCNGG	8 cut(s)	454, 455, 693, 727, 900, 1106, 1128, 1659
SduI	GDGCHC	4 cut(s)	546, 819, 1021, 1154
SfaNI	GCATC	1 cut(s)	895
SfcI	CTRYAG	2 cut(s)	654, 1530
SinI	GGWCC	3 cut(s)	69, 346, 1229
SmaI	CCCGGG	1 cut(s)	455
SmiMI	CAYNNNNRTG	3 cut(s)	102, 150, 1352
SmlI	CTYRAG	1 cut(s)	1145
SmoI	CTYRAG	1 cut(s)	1145
SphI	GCATGC	2 cut(s)	794, 1439
Sse9I	AATT	7 cut(s)	666, 876, 941, 1002, 1211, 1449, 1736
SspMI	CTAG	6 cut(s)	306, 786, 978, 1041, 1485, 1807
StyD4I	CCNGG	8 cut(s)	452, 453, 691, 725, 898, 1104, 1126, 1657
StyI	CCWWGG	3 cut(s)	97, 1390, 1500
TaaI	ACNGT	4 cut(s)	65, 449, 840, 1375
TaiI	ACGT	1 cut(s)	568
TaqI	TCGA	3 cut(s)	606, 722, 1309
TaqII	GACCGA	1 cut(s)	363
TasI	AATT	7 cut(s)	666, 876, 941, 1002, 1211, 1449, 1736
TauI	GCSGC	1 cut(s)	92
TfiI	GAWTC	4 cut(s)	122, 161, 322, 1220
Tru1I	TTAA	3 cut(s)	1026, 1350, 1514
Tru9I	TTAA	3 cut(s)	1026, 1350, 1514
TscAI	CASTG	2 cut(s)	604, 895
TseFI	GTSAC	1 cut(s)	561
Tsp45I	GTSAC	1 cut(s)	561
TspDTI	ATGAA	4 cut(s)	153, 849, 948, 1456
TspGWI	ACGGA	3 cut(s)	23, 51, 427
TspMI	CCCGGG	1 cut(s)	453
TspRI	CASTG	2 cut(s)	604, 895
Van91I	CCANNNNNTGG	1 cut(s)	868
VpaK11BI	GGWCC	3 cut(s)	69, 346, 1229
XapI	RAATTY	3 cut(s)	666, 941, 1736
XceI	RCATGY	3 cut(s)	712, 794, 1439
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1102
XmaI	CCCGGG	1 cut(s)	453
XmiI	GTMKAC	1 cut(s)	722
XspI	CTAG	6 cut(s)	306, 786, 978, 1041, 1485, 1807

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.