pycom15g24720

Converts zeaxanthin into antheraxanthin and subsequently violaxanthin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0002983
Physical Location & Seq
Reverse (-)
18987791 .. 18992419
4629 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2157 bp
ATGGTGTTTGTCTCTCAAGCCTTCAAAGGTCGTGGCTCCCAGTCACCTATATTATTTTATCTCCCTCCCTCTCTCTCTCTCCCTCCATTTTTTCTCCCTCCTCAAGTCCTCAGACTCAGAGTCGTTATCTTTCCACACAGAGCAAGAAAGCCCGAAGCTTTCTTTTTTTTTGTGTTCCATCTTTTTTTCTTATTTTTTTGGTTCTTTCTTCTTTGCTTCTCAGAGCAGAAACCTATGGCTTCCGCTGTTTTCTGCAACTCCATGAACCCAGCGGCGGTAGTTTTCTCAAGATCCCACCTACCGTGTCCCGCCAACAAAGACTTCCCACTTGTATTTTCCGCATATTTTCACTTCAACTGCCGTTTGAGAAGCAGAGCAAGAACTGGGAATAACAAGTGTTTGACTGAGGTGAGAGCTGCTACGGCGGCGCCACCCGCAGAGGCCTCCACTAGTGCGCCCGCACCGACCCAGCAGAAGAAGAACCTGAGAATTCTGGTTGCCGGCGGTGGAATCGGAGGGCTGGTTTTTGCTCTGGCGGCGAAAAAGAAGGGATTCGATGTGGTGGTGTTTGAGAAGGATTTGAGTGCTGTGAGAGGAGAGGGGCAGTACAGAGGTCCTATTCAGATACAGAGTAATGCGTTGGCGGCGTTGGAAGCCATTGATGTGGATGTTGCTGAGGAGGTTATGACGGTTGGTTGTGTTACTGGGGATAGGATCAATGGACTCGTTGATGGGGTTTCTGGTACTTGGTATGTCAAGTTTGACACATTCACTCCTGCAGTGGAACGGGGGCTTCCAGTTACAAGAGTTATAAGCCGAATGACATTGCAACAAATACTTGCTCGTGCTGTCGGGGACAACATTATTATAAATGGTAGTAATGTTGTTAACTTTGAGGATGTTGGAGACAAGGTTAATGTGATACTTGAGAATGGCGAGCGTTTTGAAGGCGATGTTCTGATTGGAGCCGATGGTATATGGTCAAAGGTGAGGAAGAACTTGTTTGGATTAACGGAAGCTGTTTACTCTGGTTACACTTGTTATACTGGTATTGCAGATTTTGTGCCTGCTGACATAAATTCTGTAGGGTACCGCGTATTCTTGGGGCACAAGCAATACTTTGTTTCTTCAGATGTCGGTGCAGGAAAGATGCAGTGGTATGCATTTCACAAGGAAGCACCTGGTGGTGTTGATAGCCCCAATGAGGAAGATGCAATTCTACGACGAGACATATATGATAGGACACCCATCCTAACCTGGGGAAAGGGTCGTGTGACCTTGCTTGGCGATTCTGTTCATGCTATGCAGCCAAATATGGGTCAAGGGGGATGCATGGCCATTGAGGATGGTTATCAACTTGCAAAGGAGCTTGATAAAGCATGGCAGAAAAGCAGCGAATCGGGAACTCCTATTGACATTAATTCTTCTTTGAGAAGCTATGAGAATTCTAGAAGACTGCGGGTTGCCATTATTCATGGAATGGCCAGAATGGCTGCACTAATGGCTTCCACTTACAAGGCTTATCTGGGAGTGGGACTTGGTCCTTTGTCGTTTTTGACGAAGTTTCGGATACCACATCCGGGAAGAGTTGGTGGGAGAGTTTTTATTGATAAGGCAATGCCTTTGATGCTGAGCTGGGTCTTAGGTGGTAACAGCTCAAAACTTGAAGGAAGGTCACCCAGTTGCAGGCTCTCAGATAAAGCAAGTGACCAGTTACGAACATGGTTTGAAGACGATGATGCACTGGAGCGTGCTATTGACGGAGAGTGGTATCTTATACCTTGTGGGCAAGACAACGATCCTTCGCAACTTATTTGTTTGAATAGAGATGAGAAAACATCCTGCATAATCGGGAGCGTACCACATGGGGATGCTTCTGGAACATCATTAACAATACGCTCGCCCCAGGTCTCGGATATGCACGCTCGTATCAGCTACAAGGATGGTGCCTTCTACGTGACTGATTTGCAAAGTGAATATGGCACCTGGATTGCTGATATTGAGGAGAAGCGATACCGAGTACCCCCAAATTCCCCTGCTCGTTTACATGCTTCCGATGCTATTGAGATTGGTTCCCAGAAGGTGGCGTTCAGGGTTAAAGTTATGAAGTCTTCTCCGAAAAGTGCCGAGAAGGAAGGAGTTCTTCAAGCTGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009540 GO:0009628 GO:0009639 GO:0009687 GO:0009688 GO:0009743 GO:0009756 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010114 GO:0010182 GO:0016053 GO:0016106 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0019752 GO:0023052 GO:0030104 GO:0031967 GO:0031975 GO:0032501 GO:0032787 GO:0042221 GO:0042440 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046148 GO:0046165 GO:0046394 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050878 GO:0050891 GO:0050896 GO:0051716 GO:0052662 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
FAD_binding_3 FHA NAD_binding_8

Protein Analysis

719

Amino Acids

78.95

Weight (kDa)

8.65

Isoelectric Point (pI)

43.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 419 - 462 2.4e-07 FAD binding domain
FHA PF00498 626 - 691 1.6e-10 FHA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 812, 869
Acc65I GGTACC 1 cut(s) 1089
AccB1I GGYRCC 4 cut(s) 427, 1089, 1946, 1982
AccB7I CCANNNNNTGG 1 cut(s) 2083
AccII CGCG 1 cut(s) 1095
AclWI GGATC 3 cut(s) 285, 722, 1793
AcoI YGGCCR 2 cut(s) 1335, 1482
AcsI RAATTY 4 cut(s) 489, 1078, 1444, 2029
AcuI CTGAAG 1 cut(s) 1113
AcyI GRCGYC 1 cut(s) 428
AdeI CACNNNGTG 1 cut(s) 1184
AfaI GTAC 5 cut(s) 608, 745, 1091, 1860, 2022
AfiI CCNNNNNNNGG 8 cut(s) 274, 1204, 1258, 1316, 1580, 1686, 1912, 2083
AgsI TTSAA 7 cut(s) 25, 355, 947, 1667, 1730, 1822, 2147
AhdI GACNNNNNGTC 1 cut(s) 119
AhlI ACTAGT 1 cut(s) 449
AjnI CCWGG 4 cut(s) 1180, 1256, 1905, 1985
AjuI GAANNNNNNNTTGG 2 cut(s) 305, 337
AluBI AGCT 9 cut(s) 158, 416, 1019, 1369, 1437, 1635, 1656, 1935, 2150
AluI AGCT 9 cut(s) 158, 416, 1019, 1369, 1437, 1635, 1656, 1935, 2150
Alw26I GTCTC 4 cut(s) 16, 900, 1221, 1915
AlwI GGATC 3 cut(s) 285, 722, 1793
AoxI GGCC 3 cut(s) 441, 1335, 1482
ApeKI GCWGC 5 cut(s) 416, 1306, 1392, 1493, 2150
ApoI RAATTY 4 cut(s) 489, 1078, 1444, 2029
AseI ATTAAT 1 cut(s) 1419
Asp700I GAANNNNTTC 2 cut(s) 551, 2139
Asp718I GGTACC 1 cut(s) 1089
AspLEI GCGC 2 cut(s) 430, 457
AspS9I GGNCC 2 cut(s) 614, 1541
AsuC2I CCSGG 1 cut(s) 1581
AsuHPI GGTGA 4 cut(s) 36, 421, 1000, 1668
AvaII GGWCC 2 cut(s) 614, 1541
BaeGI GKGCMC 1 cut(s) 1110
BaeI ACNNNNGTAYC 2 cut(s) 1912, 1945
BalI TGGCCA 2 cut(s) 1337, 1484
BanI GGYRCC 4 cut(s) 427, 1089, 1946, 1982
BauI CACGAG 1 cut(s) 843
BbsI GAAGAC 3 cut(s) 1459, 1737, 2103
BbvCI CCTCAGC 1 cut(s) 675
BbvI GCAGC 5 cut(s) 403, 1318, 1404, 1480, 2137
BccI CCATC 6 cut(s) 186, 725, 965, 1256, 1340, 1937
BceAI ACGGC 2 cut(s) 345, 438
BciT130I CCWGG 4 cut(s) 1182, 1258, 1907, 1987
BciVI GTATCC 1 cut(s) 1563
BcnI CCSGG 1 cut(s) 1581
BcoDI GTCTC 4 cut(s) 16, 900, 1221, 1915
BcuI ACTAGT 1 cut(s) 449
BfaI CTAG 2 cut(s) 450, 1449
BfmI CTRYAG 2 cut(s) 777, 1083
BfoI RGCGCY 1 cut(s) 431
BfuI GTATCC 1 cut(s) 1563
BglI GCCNNNNNGGC 1 cut(s) 1490
BisI GCNGC 9 cut(s) 273, 417, 426, 537, 645, 1307, 1393, 1494, 2151
BlpI GCTNAGC 1 cut(s) 1631
BlsI GCNGC 9 cut(s) 274, 418, 427, 538, 646, 1308, 1394, 1495, 2152
Bme1390I CCNGG 5 cut(s) 1182, 1258, 1581, 1907, 1987
Bme18I GGWCC 2 cut(s) 614, 1541
BmeRI GACNNNNNGTC 1 cut(s) 119
BmgT120I GGNCC 2 cut(s) 614, 1541
BmiI GGNNCC 7 cut(s) 37, 429, 967, 1091, 1948, 1984, 2074
BmrFI CCNGG 5 cut(s) 1182, 1258, 1581, 1907, 1987
BmrI ACTGGG 4 cut(s) 34, 393, 714, 1674
BmsI GCATC 7 cut(s) 1140, 1201, 1319, 1617, 1729, 1861, 2047
BmuI ACTGGG 4 cut(s) 34, 393, 714, 1674
BpiI GAAGAC 3 cut(s) 1459, 1737, 2103
BpmI CTGGAG 1 cut(s) 1766
Bpu10I CCTNAGC 1 cut(s) 675
Bpu1102I GCTNAGC 1 cut(s) 1631
BpuEI CTTGAG 3 cut(s) 87, 271, 947
BpuMI CCSGG 1 cut(s) 1581
BsaAI YACGTR 1 cut(s) 1957
BsaBI GATNNNNATC 1 cut(s) 1350
BsaHI GRCGYC 1 cut(s) 428
BsaI GGTCTC 1 cut(s) 1915
BsaJI CCNNGG 2 cut(s) 1257, 1905
BsaXI ACNNNNNCTCC 6 cut(s) 507, 537, 757, 787, 897, 927
Bsc4I CCNNNNNNNGG 8 cut(s) 274, 1204, 1258, 1316, 1580, 1686, 1912, 2083
Bse118I RCCGGY 1 cut(s) 500
Bse1I ACTGG 8 cut(s) 40, 388, 709, 797, 1051, 1680, 1711, 1749
Bse3DI GCAATG 2 cut(s) 824, 1623
Bse8I GATNNNNATC 1 cut(s) 1350
BseBI CCWGG 4 cut(s) 1182, 1258, 1907, 1987
BseDI CCNNGG 2 cut(s) 1257, 1905
BseGI GGATG 9 cut(s) 673, 904, 1248, 1334, 1351, 1576, 1838, 1876, 1948
BseJI GATNNNNATC 1 cut(s) 1350
BseLI CCNNNNNNNGG 8 cut(s) 274, 1204, 1258, 1316, 1580, 1686, 1912, 2083
BseMI GCAATG 2 cut(s) 824, 1623
BseMII CTCAG 8 cut(s) 124, 130, 234, 396, 476, 666, 1622, 1707
BseNI ACTGG 8 cut(s) 40, 388, 709, 797, 1051, 1680, 1711, 1749
BseRI GAGGAG 4 cut(s) 90, 609, 692, 2018
BseSI GKGCMC 1 cut(s) 1110
BseXI GCAGC 5 cut(s) 403, 1318, 1404, 1480, 2137
BseYI CCCAGC 3 cut(s) 268, 468, 1635
BsgI GTGCAG 2 cut(s) 1161, 1479
Bsh1236I CGCG 1 cut(s) 1095
BshFI GGCC 3 cut(s) 443, 1337, 1484
BshNI GGYRCC 4 cut(s) 427, 1089, 1946, 1982
BsiSI CCGG 2 cut(s) 501, 1580
BslFI GGGAC 3 cut(s) 291, 869, 1548
BslI CCNNNNNNNGG 8 cut(s) 274, 1204, 1258, 1316, 1580, 1686, 1912, 2083
BsmAI GTCTC 4 cut(s) 16, 900, 1221, 1915
BsmFI GGGAC 3 cut(s) 291, 869, 1548
BsnI GGCC 3 cut(s) 443, 1337, 1484
Bso31I GGTCTC 1 cut(s) 1915
Bsp1286I GDGCHC 1 cut(s) 1110
Bsp143I GATC 3 cut(s) 290, 714, 1798
Bsp1720I GCTNAGC 1 cut(s) 1631
BspANI GGCC 3 cut(s) 443, 1337, 1484
BspCNI CTCAG 8 cut(s) 123, 129, 233, 397, 477, 667, 1623, 1706
BspFNI CGCG 1 cut(s) 1095
BspLI GGNNCC 7 cut(s) 37, 429, 967, 1091, 1948, 1984, 2074
BspMAI CTGCAG 1 cut(s) 781
BspPI GGATC 3 cut(s) 285, 722, 1793
BspT107I GGYRCC 4 cut(s) 427, 1089, 1946, 1982
BspTNI GGTCTC 1 cut(s) 1915
BsrDI GCAATG 2 cut(s) 824, 1623
BsrFI RCCGGY 1 cut(s) 500
BsrI ACTGG 8 cut(s) 40, 388, 709, 797, 1051, 1680, 1711, 1749
BssAI RCCGGY 1 cut(s) 500
BssECI CCNNGG 2 cut(s) 1257, 1905
BssMI GATC 3 cut(s) 290, 714, 1798
BssNI GRCGYC 1 cut(s) 428
BssSI CACGAG 1 cut(s) 843
Bst2BI CACGAG 1 cut(s) 843
Bst2UI CCWGG 4 cut(s) 1182, 1258, 1907, 1987
Bst4CI ACNGT 2 cut(s) 303, 691
Bst6I CTCTTC 1 cut(s) 1579
BstACI GRCGYC 1 cut(s) 428
BstBAI YACGTR 1 cut(s) 1957
BstC8I GCNNGC 8 cut(s) 459, 502, 938, 1068, 1688, 1752, 1901, 1923
BstDEI CTNAG 9 cut(s) 110, 116, 220, 405, 485, 675, 1631, 1642, 1693
BstEII GGTNACC 1 cut(s) 1674
BstF5I GGATG 9 cut(s) 673, 904, 1248, 1334, 1351, 1576, 1838, 1876, 1948
BstFNI CGCG 1 cut(s) 1095
BstH2I RGCGCY 1 cut(s) 431
BstHHI GCGC 2 cut(s) 430, 457
BstKTI GATC 3 cut(s) 293, 717, 1801
BstMAI GTCTC 4 cut(s) 16, 900, 1221, 1915
BstMBI GATC 3 cut(s) 290, 714, 1798
BstNI CCWGG 4 cut(s) 1182, 1258, 1907, 1987
BstNSI RCATGY 1 cut(s) 2051
BstPI GGTNACC 1 cut(s) 1674
BstSCI CCNGG 5 cut(s) 1180, 1256, 1579, 1905, 1985
BstSFI CTRYAG 2 cut(s) 777, 1083
BstSLI GKGCMC 1 cut(s) 1110
BstUI CGCG 1 cut(s) 1095
BstV1I GCAGC 5 cut(s) 403, 1318, 1404, 1480, 2137
BstV2I GAAGAC 3 cut(s) 1459, 1737, 2103
BstX2I RGATCY 1 cut(s) 290
BstXI CCANNNNNNTGG 1 cut(s) 664
BstYI RGATCY 1 cut(s) 290
BsuI GTATCC 1 cut(s) 1563
BsuRI GGCC 3 cut(s) 443, 1337, 1484
BtgZI GCGATG 1 cut(s) 966
BtsCI GGATG 9 cut(s) 673, 904, 1248, 1334, 1351, 1576, 1838, 1876, 1948
BtsI GCAGTG 2 cut(s) 786, 1160
BtsIMutI CAGTG 3 cut(s) 786, 1160, 1742
Cac8I GCNNGC 8 cut(s) 459, 502, 938, 1068, 1688, 1752, 1901, 1923
CfoI GCGC 2 cut(s) 430, 457
Cfr10I RCCGGY 1 cut(s) 500
Cfr13I GGNCC 2 cut(s) 614, 1541
CsiI ACCWGGT 1 cut(s) 1180
Csp6I GTAC 5 cut(s) 607, 744, 1090, 1859, 2021
CspCI CAANNNNNGTGG 2 cut(s) 13, 48
CviAII CATG 8 cut(s) 262, 1298, 1333, 1380, 1475, 1722, 1865, 2048
CviQI GTAC 5 cut(s) 607, 744, 1090, 1859, 2021
DdeI CTNAG 9 cut(s) 110, 116, 220, 405, 485, 675, 1631, 1642, 1693
DinI GGCGCC 1 cut(s) 429
DpnI GATC 3 cut(s) 292, 716, 1800
DpnII GATC 3 cut(s) 290, 714, 1798
DraIII CACNNNGTG 1 cut(s) 1184
DriI GACNNNNNGTC 1 cut(s) 119
EaeI YGGCCR 2 cut(s) 1335, 1482
Eam1104I CTCTTC 1 cut(s) 1579
Eam1105I GACNNNNNGTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 1579
Eco147I AGGCCT 1 cut(s) 443
Eco31I GGTCTC 1 cut(s) 1915
Eco47I GGWCC 2 cut(s) 614, 1541
Eco57I CTGAAG 1 cut(s) 1113
Eco91I GGTNACC 1 cut(s) 1674
EcoO109I RGGNCCY 1 cut(s) 614
EcoO65I GGTNACC 1 cut(s) 1674
EcoRI GAATTC 2 cut(s) 489, 1444
EcoRII CCWGG 4 cut(s) 1180, 1256, 1905, 1985
EcoT22I ATGCAT 2 cut(s) 1165, 1334
EgeI GGCGCC 1 cut(s) 429
EheI GGCGCC 1 cut(s) 429
FaeI CATG 8 cut(s) 265, 1301, 1336, 1383, 1478, 1725, 1868, 2051
FalI AAGNNNNNCTT 3 cut(s) 1103, 1135, 2127
FaqI GGGAC 3 cut(s) 291, 869, 1548
FatI CATG 8 cut(s) 261, 1297, 1332, 1379, 1474, 1721, 1864, 2047
FauI CCCGC 4 cut(s) 316, 442, 466, 1452
Fnu4HI GCNGC 9 cut(s) 273, 417, 426, 537, 645, 1307, 1393, 1494, 2151
FokI GGATG 9 cut(s) 680, 911, 1235, 1341, 1358, 1563, 1825, 1883, 1955
Fsp4HI GCNGC 9 cut(s) 273, 417, 426, 537, 645, 1307, 1393, 1494, 2151
FspBI CTAG 2 cut(s) 450, 1449
GlaI GCGC 2 cut(s) 429, 456
GluI GCNGC 9 cut(s) 273, 417, 426, 537, 645, 1307, 1393, 1494, 2151
GsaI CCCAGC 3 cut(s) 272, 472, 1639
GsuI CTGGAG 1 cut(s) 1766
HaeII RGCGCY 1 cut(s) 431
HaeIII GGCC 3 cut(s) 443, 1337, 1484
HapII CCGG 2 cut(s) 501, 1580
HhaI GCGC 2 cut(s) 430, 457
Hin1I GRCGYC 1 cut(s) 428
Hin1II CATG 8 cut(s) 265, 1301, 1336, 1383, 1478, 1725, 1868, 2051
Hin6I GCGC 2 cut(s) 428, 455
HinP1I GCGC 2 cut(s) 428, 455
HincII GTYRAC 1 cut(s) 889
HindII GTYRAC 1 cut(s) 889
HindIII AAGCTT 1 cut(s) 156
HinfI GANTC 7 cut(s) 114, 120, 510, 552, 723, 1289, 1397
HpaI GTTAAC 1 cut(s) 889
HpaII CCGG 2 cut(s) 501, 1580
HphI GGTGA 4 cut(s) 36, 421, 1000, 1668
Hpy166II GTNNAC 3 cut(s) 889, 1024, 2045
Hpy188III TCNNGA 5 cut(s) 288, 1401, 1449, 1852, 1878
Hpy8I GTNNAC 3 cut(s) 889, 1024, 2045
Hpy99I CGWCG 1 cut(s) 1227
HpyCH4III ACNGT 2 cut(s) 303, 691
HpyCH4IV ACGT 1 cut(s) 1956
HpyF3I CTNAG 9 cut(s) 110, 116, 220, 405, 485, 675, 1631, 1642, 1693
HpySE526I ACGT 1 cut(s) 1956
Hsp92I GRCGYC 1 cut(s) 428
Hsp92II CATG 8 cut(s) 265, 1301, 1336, 1383, 1478, 1725, 1868, 2051
HspAI GCGC 2 cut(s) 428, 455
KasI GGCGCC 1 cut(s) 427
KpnI GGTACC 1 cut(s) 1093
KroI GCCGGC 1 cut(s) 500
KroNI GCCGGC 1 cut(s) 502
KspAI GTTAAC 1 cut(s) 889
Kzo9I GATC 3 cut(s) 290, 714, 1798
LmnI GCTCC 5 cut(s) 41, 965, 1366, 1747, 1854
Lsp1109I GCAGC 5 cut(s) 403, 1318, 1404, 1480, 2137
LweI GCATC 7 cut(s) 1140, 1201, 1319, 1617, 1729, 1861, 2047
MabI ACCWGGT 1 cut(s) 1180
MaeI CTAG 2 cut(s) 450, 1449
MaeII ACGT 1 cut(s) 1956
MalI GATC 3 cut(s) 292, 716, 1800
MboI GATC 3 cut(s) 290, 714, 1798
MflI RGATCY 1 cut(s) 290
MhlI GDGCHC 1 cut(s) 1110
MlsI TGGCCA 2 cut(s) 1337, 1484
MluCI AATT 6 cut(s) 489, 1078, 1215, 1420, 1444, 2029
MluNI TGGCCA 2 cut(s) 1337, 1484
Mly113I GGCGCC 1 cut(s) 428
MlyI GAGTC 3 cut(s) 108, 129, 717
MmeI TCCRAC 2 cut(s) 630, 883
Mox20I TGGCCA 2 cut(s) 1337, 1484
Mph1103I ATGCAT 2 cut(s) 1165, 1334
MroNI GCCGGC 1 cut(s) 500
MroXI GAANNNNTTC 2 cut(s) 551, 2139
MscI TGGCCA 2 cut(s) 1337, 1484
MseI TTAA 6 cut(s) 888, 915, 1010, 1419, 1889, 2097
MslI CAYNNNNRTG 2 cut(s) 662, 1869
Msp20I TGGCCA 2 cut(s) 1337, 1484
MspA1I CMGCKG 2 cut(s) 245, 272
MspI CCGG 2 cut(s) 501, 1580
MspR9I CCNGG 5 cut(s) 1182, 1258, 1581, 1907, 1987
MvaI CCWGG 4 cut(s) 1182, 1258, 1907, 1987
MvnI CGCG 1 cut(s) 1095
NaeI GCCGGC 1 cut(s) 502
NarI GGCGCC 1 cut(s) 428
NciI CCSGG 1 cut(s) 1581
NdeII GATC 3 cut(s) 290, 714, 1798
NgoMIV GCCGGC 1 cut(s) 500
NlaIII CATG 8 cut(s) 265, 1301, 1336, 1383, 1478, 1725, 1868, 2051
NlaIV GGNNCC 7 cut(s) 37, 429, 967, 1091, 1948, 1984, 2074
NmeAIII GCCGAG 1 cut(s) 2152
NmuCI GTSAC 5 cut(s) 42, 1273, 1674, 1706, 1957
NsiI ATGCAT 2 cut(s) 1165, 1334
NspI RCATGY 1 cut(s) 2051
PceI AGGCCT 1 cut(s) 443
PcsI WCGNNNNNNNCGW 1 cut(s) 1556
PdiI GCCGGC 1 cut(s) 502
PdmI GAANNNNTTC 2 cut(s) 551, 2139
PfeI GAWTC 4 cut(s) 510, 552, 1289, 1397
PflFI GACNNNGTC 1 cut(s) 1539
PflMI CCANNNNNTGG 1 cut(s) 2083
PfoI TCCNGGA 1 cut(s) 1579
PkrI GCNGC 9 cut(s) 274, 418, 427, 538, 646, 1308, 1394, 1495, 2152
PleI GAGTC 3 cut(s) 108, 128, 717
PluTI GGCGCC 1 cut(s) 431
PpsI GAGTC 3 cut(s) 108, 128, 717
Ppu21I YACGTR 1 cut(s) 1957
PpuMI RGGWCCY 1 cut(s) 614
PshBI ATTAAT 1 cut(s) 1419
PsiI TTATAA 2 cut(s) 812, 869
Psp5II RGGWCCY 1 cut(s) 614
Psp6I CCWGG 4 cut(s) 1180, 1256, 1905, 1985
PspEI GGTNACC 1 cut(s) 1674
PspFI CCCAGC 3 cut(s) 268, 468, 1635
PspGI CCWGG 4 cut(s) 1180, 1256, 1905, 1985
PspN4I GGNNCC 7 cut(s) 37, 429, 967, 1091, 1948, 1984, 2074
PspPI GGNCC 2 cut(s) 614, 1541
PspPPI RGGWCCY 1 cut(s) 614
PstI CTGCAG 1 cut(s) 781
PsuI RGATCY 1 cut(s) 290
PsyI GACNNNGTC 1 cut(s) 1539
RsaI GTAC 5 cut(s) 608, 745, 1091, 1860, 2022
RsaNI GTAC 5 cut(s) 607, 744, 1090, 1859, 2021
RseI CAYNNNNRTG 2 cut(s) 662, 1869
SaqAI TTAA 6 cut(s) 888, 915, 1010, 1419, 1889, 2097
SatI GCNGC 9 cut(s) 273, 417, 426, 537, 645, 1307, 1393, 1494, 2151
Sau3AI GATC 3 cut(s) 290, 714, 1798
Sau96I GGNCC 2 cut(s) 614, 1541
SchI GAGTC 3 cut(s) 108, 129, 717
ScrFI CCNGG 5 cut(s) 1182, 1258, 1581, 1907, 1987
SduI GDGCHC 1 cut(s) 1110
SexAI ACCWGGT 1 cut(s) 1180
SfaNI GCATC 7 cut(s) 1140, 1201, 1319, 1617, 1729, 1861, 2047
SfcI CTRYAG 2 cut(s) 777, 1083
SfoI GGCGCC 1 cut(s) 429
SinI GGWCC 2 cut(s) 614, 1541
SmiMI CAYNNNNRTG 2 cut(s) 662, 1869
SmlI CTYRAG 4 cut(s) 15, 102, 286, 926
SmoI CTYRAG 4 cut(s) 15, 102, 286, 926
SpeI ACTAGT 1 cut(s) 449
Sse9I AATT 6 cut(s) 489, 1078, 1215, 1420, 1444, 2029
SseBI AGGCCT 1 cut(s) 443
SspDI GGCGCC 1 cut(s) 427
SspMI CTAG 2 cut(s) 450, 1449
StuI AGGCCT 1 cut(s) 443
StyD4I CCNGG 5 cut(s) 1180, 1256, 1579, 1905, 1985
TaaI ACNGT 2 cut(s) 303, 691
TaiI ACGT 1 cut(s) 1959
TaqI TCGA 1 cut(s) 555
TasI AATT 6 cut(s) 489, 1078, 1215, 1420, 1444, 2029
TatI WGTACW 1 cut(s) 606
TauI GCSGC 4 cut(s) 275, 428, 539, 647
TfiI GAWTC 4 cut(s) 510, 552, 1289, 1397
Tru1I TTAA 6 cut(s) 888, 915, 1010, 1419, 1889, 2097
Tru9I TTAA 6 cut(s) 888, 915, 1010, 1419, 1889, 2097
TscAI CASTG 3 cut(s) 786, 1160, 1749
TseFI GTSAC 5 cut(s) 42, 1273, 1674, 1706, 1957
TseI GCWGC 5 cut(s) 416, 1306, 1392, 1493, 2150
Tsp45I GTSAC 5 cut(s) 42, 1273, 1674, 1706, 1957
TspDTI ATGAA 4 cut(s) 278, 1286, 1463, 2120
TspGWI ACGGA 2 cut(s) 1028, 1776
TspRI CASTG 3 cut(s) 786, 1160, 1749
Tth111I GACNNNGTC 1 cut(s) 1539
Van91I CCANNNNNTGG 1 cut(s) 2083
VpaK11BI GGWCC 2 cut(s) 614, 1541
VspI ATTAAT 1 cut(s) 1419
XapI RAATTY 4 cut(s) 489, 1078, 1444, 2029
XbaI TCTAGA 1 cut(s) 1448
XceI RCATGY 1 cut(s) 2051
XmnI GAANNNNTTC 2 cut(s) 551, 2139
XspI CTAG 2 cut(s) 450, 1449
Zsp2I ATGCAT 2 cut(s) 1165, 1334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.