Rw2G014150

Converts zeaxanthin into antheraxanthin and subsequently violaxanthin

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
15702610 .. 15707715
5106 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G014150.1

Sequence Viewer

Length: 1983 bp
ATGGCGTCTGCTCTCTCCTACAACTCCATGAACCTCTCTGCAACCGTTTTTTCAAGAACCCATTTCCCGATTCCGATCACCAGAGACTTCCCAGTTGAGTTTTCACCTTACATTCACTGTGACTACAATCTCAGAAGCAGAGCAAAAACAGGGCAGAAGCGGAATTTGACCGAGGTCAGAGCTACGTTGGCGACCAGAGAGAACAACCCAGCTGCATGCAACAGTTCTGATCAGAAGAAGCTTCGGATTTTGGTTGCTGGGGGAGGAATTGGAGGGCTGGTTTTTGCTTTGGCGGCGAAGAAGAAGGGGTTTGAGGTTTTGGTGTTTGAGAAGGATTTGAGTGCTGTGAGAGGTGAGGGACAGTACAGAGGTCCAATTCAGATACAGAGTAATGCCTTGGCTGCTTTGGAAGCTATTGATTTGGATGTGGCTGAGGAGGTTATGAGACTTGGCTGTATTACTGGTGATAGGATCAATGGCCTCGTTGATGGAGTTTCTGGAACTTGGTATGTCAAGTTTGACACATTCACTCCTGCAGCGGAACGGGGGCTTCCGGTTACAAGAGTCATAAGCCGAATGTTACTGCAGCAAATCCTTGCTGGTGCTGTTGGTGATGATATTATTTTTAATGGGAGTAATGTCGTTGATTTTCAGGATCTTGGAAACAAGGTTAATGTTGTACTTGAGAATGGAGAGTGTTACGAAGGTGATCTTCTGGTTGGAGCTGATGGTATCTGGTCGAAGGTAAGGAAGAACTTATTTGGACTAGAGGAAGCTGTTTACTCGGGTTATACTTGTTATACTGGTATTACAGATTTTGTGCCTGCTGACATTAGTTCTGTAGGGTATCGAGTATTTCTGGGGCACAAACAATACTTCGTTTCTTCAGACGTAGGGGCAGGAAAGATGCAATGGTATGCGTTTCACAAGGAACCAGCTGGTGGTGCTGATGCCCCTAATGGTAAAAAGGAAAGGCTGCTTAAAATATTTGATGGCTGGTGTGATAATGTGATAGATTTGCTACTTGCCACAGAGGAAGATGCAATTCTACGACGCGACATATATGATAGGACCCCAACTTTATCCTGGGGAAAGGGTAATGTGACCTTGCTTGGAGATTCTGTCCATGCTATGCAACCAAATTTAGGTCAAGGGGGATGCATGGCCATTGAGGATGGTTATCAACTTGCATTGGAGCTTGAAAAAGCTATGAAGAAAAGCAGTGAACTGGGAACTCCTCCGGACATTGCTGCTTCTTTAAGAAGCTATGAGACCTCTAGAAAACTGCGGGTTGCCATTATTCACGGAATGGCTAGAATGGCTGCAATTATGGCTTCAACTTACAAGGCTTATCTGGGTGTAGGACTTGGTCCATTATCGTTTTTGACGAAGTTTCGGATACCACATCCAGGAAGAGTTGGTGGGAGAGTTTTTATTGACAAGGCAATGCCCTTGATGCTGAGTTGGGTCTTAGGTGGTAACAGCTCAAAACTTGAAGGAAGACCACCAAGTTGCAGGCTTTCAGACAAAGCTGATGATCAGTTACGAAGTTGGTTTGAGGACGATGATGCACTGGAGCGTGCTATTGATGGAGAGTGGTATCTCATACCTTGTGGACATGAAAATGGTGCTTCGCAACTTATTCATTTAAAAAGAGATGAGAAAACCCCCTGCATAATTGGGAACACCTCAAATGGGGATTCTTCAGTAATATCAGTTCCATTACCCCAGGTTTCAGAAAATCATGCTTCTATCACCTACAAGGATGGTGGTTTTTACCTGTCTGATTTGCGAAGCAAATATGGTACCTGGCTCGCCGACAATGAGGAGAAGCGGTACCGGATACCTCCAAATTTTGCAGTTCGTTTCCACCCCTCGGATGTTGTTGAGATTGGTCCTGGGCAGAAGGTAGCATTTAGGGTAAAAGTTATGCAGACTGCTCCAAGGAGTCCTGAAAAGGATGGAATTCTTCAGGCAGCGTGA
Functional Annotation

Protein Analysis

660

Amino Acids

72.27

Weight (kDa)

6.46

Isoelectric Point (pI)

34.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 82 - 405 1.3e-10 FAD binding domain
FHA PF00498 567 - 632 3.8e-09 FHA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1805, 1836
AccB1I GGYRCC 2 cut(s) 1805, 1836
AccB7I CCANNNNNTGG 1 cut(s) 941
AccII CGCG 1 cut(s) 1056
AccIII TCCGGA 1 cut(s) 1240
AciI CCGC 5 cut(s) 160, 293, 539, 1288, 1834
AclWI GGATC 2 cut(s) 479, 663
AcoI YGGCCR 1 cut(s) 1164
AcsI RAATTY 4 cut(s) 163, 1141, 1852, 1965
AcuI CTGAAG 3 cut(s) 870, 1689, 1955
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 365, 681, 1807, 1838
AfiI CCNNNNNNNGG 5 cut(s) 941, 1145, 1409, 1695, 1876
AgsI TTSAA 4 cut(s) 54, 1202, 1338, 1496
AjnI CCWGG 5 cut(s) 1085, 1408, 1728, 1808, 1897
Alw26I GTCTC 3 cut(s) 78, 439, 1265
AlwI GGATC 2 cut(s) 479, 663
Ama87I CYCGRG 1 cut(s) 784
Aor13HI TCCGGA 1 cut(s) 1240
AoxI GGCC 2 cut(s) 478, 1164
ApeKI GCWGC 8 cut(s) 212, 401, 536, 586, 976, 1250, 1322, 1976
ApoI RAATTY 4 cut(s) 163, 1141, 1852, 1965
Asp718I GGTACC 2 cut(s) 1805, 1836
AspS9I GGNCC 4 cut(s) 371, 1071, 1370, 1895
AsuHPI GGTGA 7 cut(s) 70, 96, 365, 476, 623, 719, 1747
AvaI CYCGRG 1 cut(s) 784
AvaII GGWCC 4 cut(s) 371, 1071, 1370, 1895
BaeGI GKGCMC 1 cut(s) 867
BalI TGGCCA 1 cut(s) 1166
BanI GGYRCC 2 cut(s) 1805, 1836
BbsI GAAGAC 1 cut(s) 1507
BbvCI CCTCAGC 1 cut(s) 432
BbvI GCAGC 7 cut(s) 199, 388, 548, 598, 963, 1237, 1309
BccI CCATC 7 cut(s) 482, 722, 986, 1169, 1583, 1760, 1955
BciT130I CCWGG 5 cut(s) 1087, 1410, 1730, 1810, 1899
BciVI GTATCC 2 cut(s) 1392, 1836
BclI TGATCA 2 cut(s) 229, 1537
BcoDI GTCTC 3 cut(s) 78, 439, 1265
BfaI CTAG 3 cut(s) 767, 1278, 1314
BfmI CTRYAG 3 cut(s) 534, 584, 840
BfuI GTATCC 2 cut(s) 1392, 1836
BisI GCNGC 9 cut(s) 213, 294, 402, 537, 587, 977, 1251, 1323, 1977
BlsI GCNGC 9 cut(s) 214, 295, 403, 538, 588, 978, 1252, 1324, 1978
Bme1390I CCNGG 5 cut(s) 1087, 1410, 1730, 1810, 1899
Bme18I GGWCC 4 cut(s) 371, 1071, 1370, 1895
BmeT110I CYCGRG 1 cut(s) 784
BmgT120I GGNCC 4 cut(s) 371, 1071, 1370, 1895
BmiI GGNNCC 4 cut(s) 933, 1073, 1807, 1838
BmrFI CCNGG 5 cut(s) 1087, 1410, 1730, 1810, 1899
BmrI ACTGGG 2 cut(s) 86, 1238
BmsI GCATC 6 cut(s) 897, 940, 1030, 1148, 1446, 1558
BmuI ACTGGG 2 cut(s) 86, 1238
BoxI GACNNNNGTC 1 cut(s) 173
BpiI GAAGAC 1 cut(s) 1507
BpmI CTGGAG 1 cut(s) 1595
Bpu10I CCTNAGC 1 cut(s) 432
BpuEI CTTGAG 1 cut(s) 704
BsaBI GATNNNNATC 2 cut(s) 74, 1179
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1265
BsaJI CCNNGG 7 cut(s) 171, 396, 1086, 1728, 1875, 1898, 1943
BsaWI WCCGGW 3 cut(s) 553, 1240, 1839
BsaXI ACNNNNNCTCC 8 cut(s) 264, 294, 514, 544, 1107, 1137, 1820, 1850
Bsc4I CCNNNNNNNGG 5 cut(s) 941, 1145, 1409, 1695, 1876
Bse1I ACTGG 5 cut(s) 92, 466, 808, 1233, 1578
Bse3DI GCAATG 3 cut(s) 917, 1245, 1452
Bse8I GATNNNNATC 2 cut(s) 74, 1179
BseAI TCCGGA 1 cut(s) 1240
BseBI CCWGG 5 cut(s) 1087, 1410, 1730, 1810, 1899
BseDI CCNNGG 7 cut(s) 171, 396, 1086, 1728, 1875, 1898, 1943
BseGI GGATG 7 cut(s) 430, 1163, 1180, 1405, 1771, 1885, 1966
BseJI GATNNNNATC 2 cut(s) 74, 1179
BseLI CCNNNNNNNGG 5 cut(s) 941, 1145, 1409, 1695, 1876
BseMI GCAATG 3 cut(s) 917, 1245, 1452
BseMII CTCAG 3 cut(s) 145, 423, 1451
BseNI ACTGG 5 cut(s) 92, 466, 808, 1233, 1578
BseRI GAGGAG 3 cut(s) 449, 1227, 1841
BseSI GKGCMC 1 cut(s) 867
BseXI GCAGC 7 cut(s) 199, 388, 548, 598, 963, 1237, 1309
BseYI CCCAGC 2 cut(s) 208, 257
Bsh1236I CGCG 1 cut(s) 1056
BshFI GGCC 2 cut(s) 480, 1166
BshNI GGYRCC 2 cut(s) 1805, 1836
BsiHKCI CYCGRG 1 cut(s) 784
BsiSI CCGG 3 cut(s) 554, 1241, 1840
BslFI GGGAC 1 cut(s) 372
BslI CCNNNNNNNGG 5 cut(s) 941, 1145, 1409, 1695, 1876
BsmAI GTCTC 3 cut(s) 78, 439, 1265
BsmFI GGGAC 1 cut(s) 372
BsnI GGCC 2 cut(s) 480, 1166
Bso31I GGTCTC 1 cut(s) 1265
BsoBI CYCGRG 1 cut(s) 784
Bsp1286I GDGCHC 1 cut(s) 867
Bsp13I TCCGGA 1 cut(s) 1240
Bsp143I GATC 6 cut(s) 75, 229, 471, 655, 709, 1537
BspACI CCGC 5 cut(s) 160, 293, 539, 1288, 1834
BspANI GGCC 2 cut(s) 480, 1166
BspCNI CTCAG 3 cut(s) 144, 424, 1452
BspEI TCCGGA 1 cut(s) 1240
BspFNI CGCG 1 cut(s) 1056
BspLI GGNNCC 4 cut(s) 933, 1073, 1807, 1838
BspMAI CTGCAG 2 cut(s) 538, 588
BspPI GGATC 2 cut(s) 479, 663
BspT107I GGYRCC 2 cut(s) 1805, 1836
BspTNI GGTCTC 1 cut(s) 1265
BsrDI GCAATG 3 cut(s) 917, 1245, 1452
BsrI ACTGG 5 cut(s) 92, 466, 808, 1233, 1578
BssECI CCNNGG 7 cut(s) 171, 396, 1086, 1728, 1875, 1898, 1943
BssMI GATC 6 cut(s) 75, 229, 471, 655, 709, 1537
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 396, 1943
Bst2UI CCWGG 5 cut(s) 1087, 1410, 1730, 1810, 1899
Bst4CI ACNGT 4 cut(s) 46, 119, 224, 363
Bst6I CTCTTC 1 cut(s) 1408
BstACI GRCGYC 1 cut(s) 5
BstC8I GCNNGC 5 cut(s) 217, 825, 1517, 1581, 1815
BstDEI CTNAG 4 cut(s) 131, 432, 1460, 1471
BstF5I GGATG 7 cut(s) 430, 1163, 1180, 1405, 1771, 1885, 1966
BstFNI CGCG 1 cut(s) 1056
BstKTI GATC 6 cut(s) 78, 232, 474, 658, 712, 1540
BstMAI GTCTC 3 cut(s) 78, 439, 1265
BstMBI GATC 6 cut(s) 75, 229, 471, 655, 709, 1537
BstMWI GCNNNNNNNGC 8 cut(s) 188, 293, 401, 410, 944, 1319, 1331, 1456
BstNI CCWGG 5 cut(s) 1087, 1410, 1730, 1810, 1899
BstNSI RCATGY 1 cut(s) 219
BstPAI GACNNNNGTC 1 cut(s) 173
BstSCI CCNGG 5 cut(s) 1085, 1408, 1728, 1808, 1897
BstSFI CTRYAG 3 cut(s) 534, 584, 840
BstSLI GKGCMC 1 cut(s) 867
BstUI CGCG 1 cut(s) 1056
BstV1I GCAGC 7 cut(s) 199, 388, 548, 598, 963, 1237, 1309
BstV2I GAAGAC 1 cut(s) 1507
BstX2I RGATCY 1 cut(s) 655
BstYI RGATCY 1 cut(s) 655
BsuI GTATCC 2 cut(s) 1392, 1836
BsuRI GGCC 2 cut(s) 480, 1166
BtsCI GGATG 7 cut(s) 430, 1163, 1180, 1405, 1771, 1885, 1966
BtsI GCAGTG 1 cut(s) 1228
BtsIMutI CAGTG 3 cut(s) 115, 1228, 1571
Cac8I GCNNGC 5 cut(s) 217, 825, 1517, 1581, 1815
Cfr13I GGNCC 4 cut(s) 371, 1071, 1370, 1895
CseI GACGC 1 cut(s) 1062
Csp6I GTAC 4 cut(s) 364, 680, 1806, 1837
CspCI CAANNNNNGTGG 2 cut(s) 1750, 1785
CviAII CATG 6 cut(s) 28, 216, 1127, 1162, 1619, 1745
CviQI GTAC 4 cut(s) 364, 680, 1806, 1837
DdeI CTNAG 4 cut(s) 131, 432, 1460, 1471
DpnI GATC 6 cut(s) 77, 231, 473, 657, 711, 1539
DpnII GATC 6 cut(s) 75, 229, 471, 655, 709, 1537
DraI TTTAAA 1 cut(s) 1650
EaeI YGGCCR 1 cut(s) 1164
Eam1104I CTCTTC 1 cut(s) 1408
EarI CTCTTC 1 cut(s) 1408
Eco130I CCWWGG 2 cut(s) 396, 1943
Eco31I GGTCTC 1 cut(s) 1265
Eco47I GGWCC 4 cut(s) 371, 1071, 1370, 1895
Eco57I CTGAAG 3 cut(s) 870, 1689, 1955
Eco88I CYCGRG 1 cut(s) 784
EcoO109I RGGNCCY 1 cut(s) 1071
EcoRI GAATTC 1 cut(s) 1965
EcoRII CCWGG 5 cut(s) 1085, 1408, 1728, 1808, 1897
EcoT14I CCWWGG 2 cut(s) 396, 1943
EcoT22I ATGCAT 1 cut(s) 1163
ErhI CCWWGG 2 cut(s) 396, 1943
FaeI CATG 6 cut(s) 31, 219, 1130, 1165, 1622, 1748
FalI AAGNNNNNCTT 2 cut(s) 696, 728
FaqI GGGAC 1 cut(s) 372
FatI CATG 6 cut(s) 27, 215, 1126, 1161, 1618, 1744
FauI CCCGC 1 cut(s) 1281
FbaI TGATCA 2 cut(s) 229, 1537
Fnu4HI GCNGC 9 cut(s) 213, 294, 402, 537, 587, 977, 1251, 1323, 1977
FokI GGATG 7 cut(s) 437, 1170, 1187, 1392, 1778, 1892, 1973
Fsp4HI GCNGC 9 cut(s) 213, 294, 402, 537, 587, 977, 1251, 1323, 1977
FspBI CTAG 3 cut(s) 767, 1278, 1314
GluI GCNGC 9 cut(s) 213, 294, 402, 537, 587, 977, 1251, 1323, 1977
GsaI CCCAGC 2 cut(s) 212, 261
GsuI CTGGAG 1 cut(s) 1595
HaeIII GGCC 2 cut(s) 480, 1166
HapII CCGG 3 cut(s) 554, 1241, 1840
HgaI GACGC 1 cut(s) 1062
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 6 cut(s) 31, 219, 1130, 1165, 1622, 1748
HindIII AAGCTT 1 cut(s) 239
HinfI GANTC 5 cut(s) 70, 564, 1118, 1700, 1948
HpaII CCGG 3 cut(s) 554, 1241, 1840
HphI GGTGA 7 cut(s) 70, 96, 365, 476, 623, 719, 1747
Hpy166II GTNNAC 3 cut(s) 781, 1226, 1616
Hpy188III TCNNGA 7 cut(s) 54, 67, 498, 653, 1241, 1278, 1952
Hpy8I GTNNAC 3 cut(s) 781, 1226, 1616
Hpy99I CGWCG 1 cut(s) 1056
HpyAV CCTTC 6 cut(s) 298, 325, 698, 736, 1490, 1900
HpyCH4III ACNGT 4 cut(s) 46, 119, 224, 363
HpyCH4IV ACGT 2 cut(s) 185, 891
HpyF10VI GCNNNNNNNGC 8 cut(s) 188, 293, 401, 410, 944, 1319, 1331, 1456
HpyF3I CTNAG 4 cut(s) 131, 432, 1460, 1471
HpySE526I ACGT 2 cut(s) 185, 891
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 6 cut(s) 31, 219, 1130, 1165, 1622, 1748
Kpn2I TCCGGA 1 cut(s) 1240
KpnI GGTACC 2 cut(s) 1809, 1840
Ksp22I TGATCA 2 cut(s) 229, 1537
Kzo9I GATC 6 cut(s) 75, 229, 471, 655, 709, 1537
LmnI GCTCC 4 cut(s) 722, 1195, 1576, 1945
Lsp1109I GCAGC 7 cut(s) 199, 388, 548, 598, 963, 1237, 1309
LweI GCATC 6 cut(s) 897, 940, 1030, 1148, 1446, 1558
MaeI CTAG 3 cut(s) 767, 1278, 1314
MaeII ACGT 2 cut(s) 185, 891
MaeIII GTNAC 7 cut(s) 119, 556, 579, 698, 1102, 1478, 1542
MalI GATC 6 cut(s) 77, 231, 473, 657, 711, 1539
MboI GATC 6 cut(s) 75, 229, 471, 655, 709, 1537
MflI RGATCY 1 cut(s) 655
MhlI GDGCHC 1 cut(s) 867
MlsI TGGCCA 1 cut(s) 1166
MluCI AATT 9 cut(s) 163, 267, 375, 1044, 1141, 1326, 1677, 1852, 1965
MluNI TGGCCA 1 cut(s) 1166
MlyI GAGTC 2 cut(s) 573, 1957
MmeI TCCRAC 1 cut(s) 700
Mox20I TGGCCA 1 cut(s) 1166
Mph1103I ATGCAT 1 cut(s) 1163
MroI TCCGGA 1 cut(s) 1240
MscI TGGCCA 1 cut(s) 1166
MseI TTAA 5 cut(s) 627, 672, 981, 1259, 1649
MslI CAYNNNNRTG 1 cut(s) 1623
Msp20I TGGCCA 1 cut(s) 1166
MspA1I CMGCKG 3 cut(s) 212, 539, 938
MspI CCGG 3 cut(s) 554, 1241, 1840
MspR9I CCNGG 5 cut(s) 1087, 1410, 1730, 1810, 1899
MvaI CCWGG 5 cut(s) 1087, 1410, 1730, 1810, 1899
MvnI CGCG 1 cut(s) 1056
MwoI GCNNNNNNNGC 8 cut(s) 188, 293, 401, 410, 944, 1319, 1331, 1456
NdeII GATC 6 cut(s) 75, 229, 471, 655, 709, 1537
NlaIII CATG 6 cut(s) 31, 219, 1130, 1165, 1622, 1748
NlaIV GGNNCC 4 cut(s) 933, 1073, 1807, 1838
NmuCI GTSAC 2 cut(s) 119, 1102
NsiI ATGCAT 1 cut(s) 1163
NspI RCATGY 1 cut(s) 219
PaeI GCATGC 1 cut(s) 219
PcsI WCGNNNNNNNCGW 1 cut(s) 1385
PfeI GAWTC 3 cut(s) 70, 1118, 1700
PflFI GACNNNGTC 1 cut(s) 1368
PflMI CCANNNNNTGG 1 cut(s) 941
PfoI TCCNGGA 1 cut(s) 1408
PkrI GCNGC 9 cut(s) 214, 295, 403, 538, 588, 978, 1252, 1324, 1978
PleI GAGTC 2 cut(s) 572, 1956
PpsI GAGTC 2 cut(s) 572, 1956
PpuMI RGGWCCY 1 cut(s) 1071
PshAI GACNNNNGTC 1 cut(s) 173
Psp5II RGGWCCY 1 cut(s) 1071
Psp6I CCWGG 5 cut(s) 1085, 1408, 1728, 1808, 1897
PspFI CCCAGC 2 cut(s) 208, 257
PspGI CCWGG 5 cut(s) 1085, 1408, 1728, 1808, 1897
PspN4I GGNNCC 4 cut(s) 933, 1073, 1807, 1838
PspPI GGNCC 4 cut(s) 371, 1071, 1370, 1895
PspPPI RGGWCCY 1 cut(s) 1071
PsrI GAACNNNNNNTAC 2 cut(s) 1701, 1733
PstI CTGCAG 2 cut(s) 538, 588
PsuI RGATCY 1 cut(s) 655
PsyI GACNNNGTC 1 cut(s) 1368
PvuII CAGCTG 2 cut(s) 212, 938
RsaI GTAC 4 cut(s) 365, 681, 1807, 1838
RsaNI GTAC 4 cut(s) 364, 680, 1806, 1837
RseI CAYNNNNRTG 1 cut(s) 1623
SaqAI TTAA 5 cut(s) 627, 672, 981, 1259, 1649
SatI GCNGC 9 cut(s) 213, 294, 402, 537, 587, 977, 1251, 1323, 1977
Sau3AI GATC 6 cut(s) 75, 229, 471, 655, 709, 1537
Sau96I GGNCC 4 cut(s) 371, 1071, 1370, 1895
SchI GAGTC 2 cut(s) 573, 1957
ScrFI CCNGG 5 cut(s) 1087, 1410, 1730, 1810, 1899
SduI GDGCHC 1 cut(s) 867
SfaNI GCATC 6 cut(s) 897, 940, 1030, 1148, 1446, 1558
SfcI CTRYAG 3 cut(s) 534, 584, 840
SinI GGWCC 4 cut(s) 371, 1071, 1370, 1895
SmiMI CAYNNNNRTG 1 cut(s) 1623
SmlI CTYRAG 1 cut(s) 683
SmoI CTYRAG 1 cut(s) 683
SphI GCATGC 1 cut(s) 219
Sse9I AATT 9 cut(s) 163, 267, 375, 1044, 1141, 1326, 1677, 1852, 1965
SsiI CCGC 5 cut(s) 160, 293, 539, 1288, 1834
SspI AATATT 1 cut(s) 987
SspMI CTAG 3 cut(s) 767, 1278, 1314
StyD4I CCNGG 5 cut(s) 1085, 1408, 1728, 1808, 1897
StyI CCWWGG 2 cut(s) 396, 1943
TaaI ACNGT 4 cut(s) 46, 119, 224, 363
TaiI ACGT 2 cut(s) 188, 894
TaqI TCGA 2 cut(s) 740, 850
TaqII GACCGA 1 cut(s) 185
TasI AATT 9 cut(s) 163, 267, 375, 1044, 1141, 1326, 1677, 1852, 1965
TatI WGTACW 2 cut(s) 363, 679
TauI GCSGC 1 cut(s) 296
TfiI GAWTC 3 cut(s) 70, 1118, 1700
Tru1I TTAA 5 cut(s) 627, 672, 981, 1259, 1649
Tru9I TTAA 5 cut(s) 627, 672, 981, 1259, 1649
TscAI CASTG 3 cut(s) 122, 1228, 1578
TseFI GTSAC 2 cut(s) 119, 1102
TseI GCWGC 8 cut(s) 212, 401, 536, 586, 976, 1250, 1322, 1976
Tsp45I GTSAC 2 cut(s) 119, 1102
TspDTI ATGAA 4 cut(s) 44, 1226, 1634, 1635
TspGWI ACGGA 1 cut(s) 1320
TspRI CASTG 3 cut(s) 122, 1228, 1578
Tth111I GACNNNGTC 1 cut(s) 1368
Van91I CCANNNNNTGG 1 cut(s) 941
VpaK11BI GGWCC 4 cut(s) 371, 1071, 1370, 1895
XapI RAATTY 4 cut(s) 163, 1141, 1852, 1965
XbaI TCTAGA 1 cut(s) 1277
XceI RCATGY 1 cut(s) 219
XcmI CCANNNNNNNNNTGG 1 cut(s) 1083
XspI CTAG 3 cut(s) 767, 1278, 1314
Zsp2I ATGCAT 1 cut(s) 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.