Rorug02G0129300

Converts zeaxanthin into antheraxanthin and subsequently violaxanthin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002983
Physical Location & Seq
Forward (+)
11155578 .. 11160610
5033 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0129300.1

Sequence Viewer

Length: 2073 bp
ATGTCCACGACGACGTCGTTCTTAACGCCGACGCAGCGGTACGGCGCCGGAGCTTTGTTCGCATTCGCTCTCCACCAGGCTCAGATCCACCAGACTCGCCCCTTGGGGTTGCTTACTCACGAAGACTCAACCGCCGCCGACCGAGCCAGTAGCTGCAGCAGTTCCGACTCCGTCTCCGATGACCCGTTGCTTTGGGTCAGCGAAAACTCCGGCCTCCTTCCACCCGTGTTTAGGTTTCTAGAGATTGATCCTGCAGCATGGTCTGGACTTCAAGAAACGGCTGCTGCTTCTCCGGCTAGTAATCATGTTGGAGCATTCTTGAGGTTGCTGGCAGAAGAAGGTGATGGCAAGAATGCTTCGGAAAATTCAGATCAAGAACTTGCTTTGTCAAGAGCTGTTGATGCTATGGCGCGTAGCATGGAACAGGATTCCGAGTCTTCTAAGTCTAAGAGGGAAAAACACATTGAATACGAACATGAATGCCGTGAGAAATTATCCACACCGGAGGTGAAGCAAAATGCTGAAGCAGCGGATGCGCCTTTGGAAAATTCGCAGGACAAAAGCGTCACAGCCGAGGTGAAACAAATCGTTCAAGCAGCGGAGGTGCCTTTGGAAAATCAGCGAGAGATTCGTGGTACTATGGTTAATGTTAAAGAGACAGTTGATAAGTCCAAGAGTGACATTGATGAGCAACCTGTTGTGGAGGCAAGAATGCTCAGTAATGAGAGGAAAATTACAGTTCTGTATGAGATTCTTTCTGCTTGTCTGGCTGATAGGCGTGAAGACAACAAAAAGTCTACCCGTCGGAGAAAGGGTTATGATGCTCGGCATCGTGTAGCTTTGCGCTTACTAGCAACTTGGCTCGATGTCAAGTGGATACAAATGGAAGCTATTGAGACAATGGTTGCTTGCTCTGCAATGGCTTTATTGAAAAATGAAGAAGAAAAAGAAGAAACTCAGTCACCAAAAAGCAAATGGGCTAAATGGAAGCGTCGTGGTATCGTGGGTGCAGCTGCAGTAACTGGAGGAGTGCTGCTGACAGTAACTGGTGGATTAGCTGCCCCAGCAATTGCAGCAGGACTTGGTGCCCTAGCTCCAACACTGGGCACTATCATCCCAGTAATTGGAGCAACTGGTTTTGCTGCGGCTGCAACTGCTGCTGGTTCTGTTGCTGGTTCCATTGTTGTTGCTGCATCATTTGGAGCTGCTGGAGCTGGACTGACAGGGTTCAAAATGGCTAGAAGAACAGGAGGTGTTGATGAATTTGAGTTCAAAGCTATTGGAGAAAATCACAACCAAGGCAGACTAGGAGTTGAGATCTTGGTCTCAGGATTTGTTTTCGATGTGGAAGATTTTGTGAGGCCTTGGGAGGGACAGAATGGAAATTTGGAAAGGTATGCCGTGCTCTGGGAGTCTAAGAATCTAATTGCAGTGAGCACTGCCATTCAGGACTGGCTTACTTCAAGTATTGCAATGGGTTTGATGAAGCAAGGTGCAATGATGACTGTGTTAAGCACTCTTTTAACTGCACTGGCTTGGCCAGCAACATTACTGGCTGCTACTGATTTTATAGATAGCAAATGGTCAATTGCTGTAGACAGGTCAGATAAAGCAGGAAAGCTGCTTGCTGATGTTTTATTAAAAGGATCTCATGGTAACAGGCCTGTTACACTTGTGGGTTTCTCACTTGGAGCACGAACAATATTCAAGTGTCTTCAGTGTTTGGCTGAGACCGAACATGATGCTGAACTTGTTGAAAGAGTTGTTCTACTTGGGGCACCCATCTCTATTAAGGGTGAGAACTGGGAAGCTGCTAGAAAGATGGTGGCTGGAAGATTTGTGAATGCTTACTCTACAAATGACTGGATGCTTGGGATTGCTTTCCGCGCTAGTTTACTTAGTCGAGGATTAGCTGGACTCCAACCGATTGATGTTCAAGGAATTGAGAATGTTGATGTTTCTGATGTCATTGATGCTCATTCCACCTATCTTTGGGCCACACAGCAGATCCTGGACATGCTTGAATTGGAGTCGTATTATCCTGTTTTTAAGAGCACTATTTGCATACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009540 GO:0009628 GO:0009639 GO:0009687 GO:0009688 GO:0009743 GO:0009756 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010114 GO:0010182 GO:0016053 GO:0016106 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0019752 GO:0023052 GO:0030104 GO:0031967 GO:0031975 GO:0032501 GO:0032787 GO:0042221 GO:0042440 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046148 GO:0046165 GO:0046394 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050878 GO:0050891 GO:0050896 GO:0051716 GO:0052662 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
FAD_binding_3 FHA NAD_binding_8

Protein Analysis

690

Amino Acids

74.55

Weight (kDa)

5.32

Isoelectric Point (pI)

39.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF726 PF05277 328 - 676 1.4e-97 Protein of unknown function (DUF726)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 563
AatII GACGTC 1 cut(s) 17
AccB1I GGYRCC 4 cut(s) 44, 604, 1085, 1777
AccB7I CCANNNNNTGG 1 cut(s) 1124
AccI GTMKAC 2 cut(s) 797, 1596
AccII CGCG 2 cut(s) 412, 1887
AciI CCGC 7 cut(s) 37, 132, 135, 530, 599, 1145, 1885
AclWI GGATC 4 cut(s) 79, 242, 1654, 2002
AcoI YGGCCR 1 cut(s) 1538
AcsI RAATTY 4 cut(s) 364, 547, 1262, 1384
AcuI CTGAAG 2 cut(s) 543, 1700
AcyI GRCGYC 2 cut(s) 14, 45
AfaI GTAC 2 cut(s) 41, 637
AfiI CCNNNNNNNGG 6 cut(s) 231, 1103, 1124, 1370, 1407, 1992
AjnI CCWGG 2 cut(s) 75, 2010
AjuI GAANNNNNNNTTGG 2 cut(s) 1370, 1402
Alw21I GWGCWC 4 cut(s) 1407, 1439, 1696, 2057
Alw26I GTCTC 5 cut(s) 178, 650, 890, 1330, 1724
AlwI GGATC 4 cut(s) 79, 242, 1654, 2002
AlwNI CAGNNNCTG 4 cut(s) 153, 1022, 1046, 2011
AoxI GGCC 5 cut(s) 211, 1361, 1538, 1661, 1995
ApoI RAATTY 4 cut(s) 364, 547, 1262, 1384
AspLEI GCGC 5 cut(s) 47, 412, 538, 846, 1889
AspS9I GGNCC 1 cut(s) 1995
AsuHPI GGTGA 5 cut(s) 353, 520, 589, 954, 1808
BaeGI GKGCMC 3 cut(s) 1090, 1109, 1780
BaeI ACNNNNGTAYC 2 cut(s) 627, 660
BalI TGGCCA 1 cut(s) 1540
BanI GGYRCC 4 cut(s) 44, 604, 1085, 1777
BbsI GAAGAC 4 cut(s) 129, 429, 789, 1706
Bbv12I GWGCWC 4 cut(s) 1407, 1439, 1696, 2057
BccI CCATC 3 cut(s) 338, 1790, 1816
BceAI ACGGC 4 cut(s) 58, 294, 468, 1385
BcgI CGANNNNNNTGC 2 cut(s) 1724, 1758
BciT130I CCWGG 2 cut(s) 77, 2012
BciVI GTATCC 1 cut(s) 870
BcoDI GTCTC 5 cut(s) 178, 650, 890, 1330, 1724
BfaI CTAG 8 cut(s) 239, 297, 851, 1091, 1239, 1307, 1815, 1890
BfmI CTRYAG 4 cut(s) 154, 252, 1014, 1593
BfoI RGCGCY 1 cut(s) 48
BfuI GTATCC 1 cut(s) 870
BglII AGATCT 1 cut(s) 1317
Bme1390I CCNGG 2 cut(s) 77, 2012
BmgT120I GGNCC 1 cut(s) 1995
BmiI GGNNCC 5 cut(s) 46, 606, 1087, 1177, 1779
BmrFI CCNGG 2 cut(s) 77, 2012
BmrI ACTGGG 3 cut(s) 1112, 1112, 1813
BmsI GCATC 8 cut(s) 391, 523, 811, 838, 1202, 1732, 1857, 1963
BmuI ACTGGG 3 cut(s) 1112, 1112, 1813
BpiI GAAGAC 4 cut(s) 129, 429, 789, 1706
BpmI CTGGAG 2 cut(s) 1044, 1230
BpuEI CTTGAG 1 cut(s) 340
BsaHI GRCGYC 2 cut(s) 14, 45
BsaI GGTCTC 2 cut(s) 1330, 1724
BsaJI CCNNGG 4 cut(s) 102, 573, 1297, 1364
BsaWI WCCGGW 1 cut(s) 502
BsaXI ACNNNNNCTCC 4 cut(s) 158, 188, 799, 829
Bsc4I CCNNNNNNNGG 6 cut(s) 231, 1103, 1124, 1370, 1407, 1992
Bse3DI GCAATG 3 cut(s) 924, 1479, 1503
BseBI CCWGG 2 cut(s) 77, 2012
BseDI CCNNGG 4 cut(s) 102, 573, 1297, 1364
BseGI GGATG 3 cut(s) 538, 1113, 1872
BseLI CCNNNNNNNGG 6 cut(s) 231, 1103, 1124, 1370, 1407, 1992
BseMI GCAATG 3 cut(s) 924, 1479, 1503
BseMII CTCAG 5 cut(s) 95, 730, 971, 1341, 1719
BseRI GAGGAG 1 cut(s) 1041
BseSI GKGCMC 3 cut(s) 1090, 1109, 1780
BseYI CCCAGC 1 cut(s) 1063
BsgI GTGCAG 2 cut(s) 1029, 1512
Bsh1236I CGCG 2 cut(s) 412, 1887
Bsh1285I CGRYCG 1 cut(s) 142
BshFI GGCC 5 cut(s) 213, 1363, 1540, 1663, 1997
BshNI GGYRCC 4 cut(s) 44, 604, 1085, 1777
BsiEI CGRYCG 1 cut(s) 142
BsiHKAI GWGCWC 4 cut(s) 1407, 1439, 1696, 2057
BsiSI CCGG 4 cut(s) 48, 210, 293, 503
BslFI GGGAC 1 cut(s) 1386
BslI CCNNNNNNNGG 6 cut(s) 231, 1103, 1124, 1370, 1407, 1992
BsmAI GTCTC 5 cut(s) 178, 650, 890, 1330, 1724
BsmBI CGTCTC 1 cut(s) 178
BsmFI GGGAC 1 cut(s) 1386
BsmI GAATGC 6 cut(s) 62, 314, 358, 485, 717, 1849
BsnI GGCC 5 cut(s) 213, 1363, 1540, 1663, 1997
Bso31I GGTCTC 2 cut(s) 1330, 1724
Bsp1286I GDGCHC 7 cut(s) 1090, 1109, 1407, 1439, 1696, 1780, 2057
Bsp143I GATC 6 cut(s) 84, 247, 370, 1317, 1646, 2007
BspACI CCGC 7 cut(s) 37, 132, 135, 530, 599, 1145, 1885
BspANI GGCC 5 cut(s) 213, 1363, 1540, 1663, 1997
BspCNI CTCAG 5 cut(s) 94, 729, 970, 1340, 1720
BspFNI CGCG 2 cut(s) 412, 1887
BspLI GGNNCC 5 cut(s) 46, 606, 1087, 1177, 1779
BspMAI CTGCAG 3 cut(s) 158, 256, 1018
BspPI GGATC 4 cut(s) 79, 242, 1654, 2002
BspT107I GGYRCC 4 cut(s) 44, 604, 1085, 1777
BspTNI GGTCTC 2 cut(s) 1330, 1724
BsrDI GCAATG 3 cut(s) 924, 1479, 1503
BssECI CCNNGG 4 cut(s) 102, 573, 1297, 1364
BssMI GATC 6 cut(s) 84, 247, 370, 1317, 1646, 2007
BssNI GRCGYC 2 cut(s) 14, 45
BssT1I CCWWGG 3 cut(s) 102, 1297, 1364
Bst2UI CCWGG 2 cut(s) 77, 2012
Bst4CI ACNGT 4 cut(s) 661, 739, 1042, 1507
BstACI GRCGYC 2 cut(s) 14, 45
BstAPI GCANNNNNTGC 3 cut(s) 533, 1157, 2061
BstC8I GCNNGC 4 cut(s) 330, 910, 1542, 1626
BstDEI CTNAG 9 cut(s) 81, 441, 447, 716, 957, 1327, 1416, 1728, 1898
BstF5I GGATG 3 cut(s) 538, 1113, 1872
BstFNI CGCG 2 cut(s) 412, 1887
BstH2I RGCGCY 1 cut(s) 48
BstHHI GCGC 5 cut(s) 47, 412, 538, 846, 1889
BstKTI GATC 6 cut(s) 87, 250, 373, 1320, 1649, 2010
BstMAI GTCTC 5 cut(s) 178, 650, 890, 1330, 1724
BstMBI GATC 6 cut(s) 84, 247, 370, 1317, 1646, 2007
BstMCI CGRYCG 1 cut(s) 142
BstNI CCWGG 2 cut(s) 77, 2012
BstNSI RCATGY 1 cut(s) 2020
BstSCI CCNGG 2 cut(s) 75, 2010
BstSFI CTRYAG 4 cut(s) 154, 252, 1014, 1593
BstSLI GKGCMC 3 cut(s) 1090, 1109, 1780
BstUI CGCG 2 cut(s) 412, 1887
BstV2I GAAGAC 4 cut(s) 129, 429, 789, 1706
BstX2I RGATCY 4 cut(s) 84, 1317, 1646, 2007
BstYI RGATCY 4 cut(s) 84, 1317, 1646, 2007
BsuI GTATCC 1 cut(s) 870
BsuRI GGCC 5 cut(s) 213, 1363, 1540, 1663, 1997
BtsCI GGATG 3 cut(s) 538, 1113, 1872
BtsI GCAGTG 2 cut(s) 1437, 1437
BtsIMutI CAGTG 5 cut(s) 1100, 1437, 1437, 1529, 1724
Cac8I GCNNGC 4 cut(s) 330, 910, 1542, 1626
CaiI CAGNNNCTG 4 cut(s) 153, 1022, 1046, 2011
CfoI GCGC 5 cut(s) 47, 412, 538, 846, 1889
Cfr13I GGNCC 1 cut(s) 1995
CseI GACGC 3 cut(s) 40, 553, 980
Csp6I GTAC 2 cut(s) 40, 636
CviAII CATG 7 cut(s) 258, 305, 418, 476, 1652, 1739, 2017
CviQI GTAC 2 cut(s) 40, 636
DdeI CTNAG 9 cut(s) 81, 441, 447, 716, 957, 1327, 1416, 1728, 1898
DinI GGCGCC 1 cut(s) 46
DpnI GATC 6 cut(s) 86, 249, 372, 1319, 1648, 2009
DpnII GATC 6 cut(s) 84, 247, 370, 1317, 1646, 2007
DrdI GACNNNNNNGTC 1 cut(s) 563
DseDI GACNNNNNNGTC 1 cut(s) 563
EaeI YGGCCR 1 cut(s) 1538
Eco130I CCWWGG 3 cut(s) 102, 1297, 1364
Eco147I AGGCCT 2 cut(s) 1363, 1663
Eco31I GGTCTC 2 cut(s) 1330, 1724
Eco57I CTGAAG 2 cut(s) 543, 1700
EcoRII CCWGG 2 cut(s) 75, 2010
EcoT14I CCWWGG 3 cut(s) 102, 1297, 1364
EgeI GGCGCC 1 cut(s) 46
EheI GGCGCC 1 cut(s) 46
ErhI CCWWGG 3 cut(s) 102, 1297, 1364
Esp3I CGTCTC 1 cut(s) 178
FaeI CATG 7 cut(s) 261, 308, 421, 479, 1655, 1742, 2020
FaqI GGGAC 1 cut(s) 1386
FatI CATG 7 cut(s) 257, 304, 417, 475, 1651, 1738, 2016
FblI GTMKAC 2 cut(s) 797, 1596
FokI GGATG 3 cut(s) 545, 1100, 1879
FspBI CTAG 8 cut(s) 239, 297, 851, 1091, 1239, 1307, 1815, 1890
GlaI GCGC 5 cut(s) 46, 411, 537, 845, 1888
GsaI CCCAGC 1 cut(s) 1067
GsuI CTGGAG 2 cut(s) 1044, 1230
HaeII RGCGCY 1 cut(s) 48
HaeIII GGCC 5 cut(s) 213, 1363, 1540, 1663, 1997
HapII CCGG 4 cut(s) 48, 210, 293, 503
HgaI GACGC 3 cut(s) 40, 553, 980
HhaI GCGC 5 cut(s) 47, 412, 538, 846, 1889
Hin1I GRCGYC 2 cut(s) 14, 45
Hin1II CATG 7 cut(s) 261, 308, 421, 479, 1655, 1742, 2020
Hin6I GCGC 5 cut(s) 45, 410, 536, 844, 1887
HinP1I GCGC 5 cut(s) 45, 410, 536, 844, 1887
HpaII CCGG 4 cut(s) 48, 210, 293, 503
HphI GGTGA 5 cut(s) 353, 520, 589, 954, 1808
Hpy166II GTNNAC 4 cut(s) 6, 798, 1597, 1895
Hpy188I TCNGA 9 cut(s) 84, 166, 178, 361, 370, 433, 807, 1606, 1963
Hpy188III TCNNGA 9 cut(s) 119, 239, 264, 272, 319, 374, 390, 1329, 1448
Hpy8I GTNNAC 4 cut(s) 6, 798, 1597, 1895
Hpy99I CGWCG 6 cut(s) 13, 16, 19, 34, 807, 996
HpyAV CCTTC 2 cut(s) 227, 332
HpyCH4III ACNGT 4 cut(s) 661, 739, 1042, 1507
HpyCH4IV ACGT 1 cut(s) 14
HpyF3I CTNAG 9 cut(s) 81, 441, 447, 716, 957, 1327, 1416, 1728, 1898
HpySE526I ACGT 1 cut(s) 14
Hsp92I GRCGYC 2 cut(s) 14, 45
Hsp92II CATG 7 cut(s) 261, 308, 421, 479, 1655, 1742, 2020
HspAI GCGC 5 cut(s) 45, 410, 536, 844, 1887
KasI GGCGCC 1 cut(s) 44
Kzo9I GATC 6 cut(s) 84, 247, 370, 1317, 1646, 2007
LmnI GCTCC 7 cut(s) 50, 311, 1099, 1127, 1202, 1211, 1691
LweI GCATC 8 cut(s) 391, 523, 811, 838, 1202, 1732, 1857, 1963
MaeI CTAG 8 cut(s) 239, 297, 851, 1091, 1239, 1307, 1815, 1890
MaeII ACGT 1 cut(s) 14
MaeIII GTNAC 7 cut(s) 565, 677, 960, 1018, 1042, 1655, 1666
MalI GATC 6 cut(s) 86, 249, 372, 1319, 1648, 2009
MboI GATC 6 cut(s) 84, 247, 370, 1317, 1646, 2007
MfeI CAATTG 2 cut(s) 1068, 1587
MflI RGATCY 4 cut(s) 84, 1317, 1646, 2007
MhlI GDGCHC 7 cut(s) 1090, 1109, 1407, 1439, 1696, 1780, 2057
MlsI TGGCCA 1 cut(s) 1540
MluNI TGGCCA 1 cut(s) 1540
Mly113I GGCGCC 1 cut(s) 45
MlyI GAGTC 7 cut(s) 88, 119, 161, 443, 1421, 1911, 2039
MmeI TCCRAC 5 cut(s) 189, 289, 785, 1121, 1945
Mox20I TGGCCA 1 cut(s) 1540
MscI TGGCCA 1 cut(s) 1540
MseI TTAA 8 cut(s) 23, 645, 651, 1511, 1523, 1640, 1791, 2049
Msp20I TGGCCA 1 cut(s) 1540
MspA1I CMGCKG 4 cut(s) 37, 530, 599, 1013
MspI CCGG 4 cut(s) 48, 210, 293, 503
MspR9I CCNGG 2 cut(s) 77, 2012
MunI CAATTG 2 cut(s) 1068, 1587
Mva1269I GAATGC 6 cut(s) 62, 314, 358, 485, 717, 1849
MvaI CCWGG 2 cut(s) 77, 2012
MvnI CGCG 2 cut(s) 412, 1887
NarI GGCGCC 1 cut(s) 45
NdeII GATC 6 cut(s) 84, 247, 370, 1317, 1646, 2007
NlaIII CATG 7 cut(s) 261, 308, 421, 479, 1655, 1742, 2020
NlaIV GGNNCC 5 cut(s) 46, 606, 1087, 1177, 1779
NmeAIII GCCGAG 2 cut(s) 598, 805
NmuCI GTSAC 3 cut(s) 565, 677, 960
NspI RCATGY 1 cut(s) 2020
PceI AGGCCT 2 cut(s) 1363, 1663
PcsI WCGNNNNNNNCGW 1 cut(s) 14
PctI GAATGC 6 cut(s) 62, 314, 358, 485, 717, 1849
PfeI GAWTC 4 cut(s) 428, 628, 751, 1420
PflFI GACNNNGTC 2 cut(s) 13, 170
PflMI CCANNNNNTGG 1 cut(s) 1124
PfoI TCCNGGA 1 cut(s) 2010
PleI GAGTC 7 cut(s) 88, 119, 161, 442, 1420, 1911, 2038
PluTI GGCGCC 1 cut(s) 48
PpsI GAGTC 7 cut(s) 88, 119, 161, 442, 1420, 1911, 2038
Psp6I CCWGG 2 cut(s) 75, 2010
PspFI CCCAGC 1 cut(s) 1063
PspGI CCWGG 2 cut(s) 75, 2010
PspN4I GGNNCC 5 cut(s) 46, 606, 1087, 1177, 1779
PspPI GGNCC 1 cut(s) 1995
PstI CTGCAG 3 cut(s) 158, 256, 1018
PstNI CAGNNNCTG 4 cut(s) 153, 1022, 1046, 2011
PsuI RGATCY 4 cut(s) 84, 1317, 1646, 2007
PsyI GACNNNGTC 2 cut(s) 13, 170
PvuII CAGCTG 1 cut(s) 1013
RsaI GTAC 2 cut(s) 41, 637
RsaNI GTAC 2 cut(s) 40, 636
SaqAI TTAA 8 cut(s) 23, 645, 651, 1511, 1523, 1640, 1791, 2049
Sau3AI GATC 6 cut(s) 84, 247, 370, 1317, 1646, 2007
Sau96I GGNCC 1 cut(s) 1995
SchI GAGTC 7 cut(s) 88, 119, 161, 443, 1421, 1911, 2039
ScrFI CCNGG 2 cut(s) 77, 2012
SduI GDGCHC 7 cut(s) 1090, 1109, 1407, 1439, 1696, 1780, 2057
SfaNI GCATC 8 cut(s) 391, 523, 811, 838, 1202, 1732, 1857, 1963
SfcI CTRYAG 4 cut(s) 154, 252, 1014, 1593
SfoI GGCGCC 1 cut(s) 46
SmlI CTYRAG 1 cut(s) 319
SmoI CTYRAG 1 cut(s) 319
SseBI AGGCCT 2 cut(s) 1363, 1663
SsiI CCGC 7 cut(s) 37, 132, 135, 530, 599, 1145, 1885
SspDI GGCGCC 1 cut(s) 44
SspI AATATT 1 cut(s) 1704
SspMI CTAG 8 cut(s) 239, 297, 851, 1091, 1239, 1307, 1815, 1890
StuI AGGCCT 2 cut(s) 1363, 1663
StyD4I CCNGG 2 cut(s) 75, 2010
StyI CCWWGG 3 cut(s) 102, 1297, 1364
TaaI ACNGT 4 cut(s) 661, 739, 1042, 1507
TaiI ACGT 1 cut(s) 17
TaqI TCGA 3 cut(s) 864, 1341, 1903
TaqII GACCGA 2 cut(s) 156, 1748
TauI GCSGC 2 cut(s) 137, 1148
TfiI GAWTC 4 cut(s) 428, 628, 751, 1420
Tru1I TTAA 8 cut(s) 23, 645, 651, 1511, 1523, 1640, 1791, 2049
Tru9I TTAA 8 cut(s) 23, 645, 651, 1511, 1523, 1640, 1791, 2049
TscAI CASTG 5 cut(s) 1107, 1437, 1444, 1536, 1724
TseFI GTSAC 3 cut(s) 565, 677, 960
Tsp45I GTSAC 3 cut(s) 565, 677, 960
TspDTI ATGAA 4 cut(s) 492, 951, 1275, 1499
TspGWI ACGGA 1 cut(s) 160
TspRI CASTG 5 cut(s) 1107, 1437, 1444, 1536, 1724
Tth111I GACNNNGTC 2 cut(s) 13, 170
Van91I CCANNNNNTGG 1 cut(s) 1124
XapI RAATTY 4 cut(s) 364, 547, 1262, 1384
XbaI TCTAGA 1 cut(s) 238
XceI RCATGY 1 cut(s) 2020
XcmI CCANNNNNNNNNTGG 1 cut(s) 972
XmiI GTMKAC 2 cut(s) 797, 1596
XspI CTAG 8 cut(s) 239, 297, 851, 1091, 1239, 1307, 1815, 1890
ZraI GACGTC 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.