No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom03g00030 pycom15g34450 pycom16g13280 |
| rosa_chinensis | RchiOBHm_Chr7g0225741 RchiOBHm_Chr7g0225771 RchiOBHm_Chr7g0225801 RchiOBHm_Chr7g0225921 |
| rosa_laevigata | RLG00000006460 RLG00000033226 RLG00000033535 RLG00000036912 |
| rosa_multiflora | Rmu_co8290005.1_g000001 Rmu_sc0000487.1_g000032 Rmu_sc0002603.1_g000001 Rmu_sc0022500.1_g000007 Rmu_sc0033404.1_g000001 |
| rosa_rugosa | Rorug07G0052500 |
| rosa_samantha | Rh1AG084700 Rh1DG089100 Rh2AG444900 Rh2CG431700 Rh4CG008300 Rh5CG358500 Rh7BG179300 Rh7CG390000 Rh7DG378100 Rh7DG378300 |
| rosa_wichuraiana | Rw2G036330 Rw7G031910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 128 |
| Acc65I | GGTACC | 1 cut(s) | 299 |
| AccB1I | GGYRCC | 1 cut(s) | 299 |
| AccBSI | CCGCTC | 1 cut(s) | 68 |
| AciI | CCGC | 1 cut(s) | 68 |
| AcsI | RAATTY | 1 cut(s) | 185 |
| AfaI | GTAC | 2 cut(s) | 291, 301 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 89, 231, 246 |
| AjnI | CCWGG | 1 cut(s) | 163 |
| AleI | CACNNNNGTG | 1 cut(s) | 146 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 246, 278 |
| Alw26I | GTCTC | 2 cut(s) | 4, 108 |
| ApoI | RAATTY | 1 cut(s) | 185 |
| Asp718I | GGTACC | 1 cut(s) | 299 |
| AspLEI | GCGC | 1 cut(s) | 237 |
| AsuHPI | GGTGA | 2 cut(s) | 181, 182 |
| BanI | GGYRCC | 1 cut(s) | 299 |
| BccI | CCATC | 3 cut(s) | 46, 83, 289 |
| BciT130I | CCWGG | 1 cut(s) | 165 |
| BcoDI | GTCTC | 2 cut(s) | 4, 108 |
| Bme1390I | CCNGG | 1 cut(s) | 165 |
| BmiI | GGNNCC | 1 cut(s) | 301 |
| BmrFI | CCNGG | 1 cut(s) | 165 |
| BmsI | GCATC | 1 cut(s) | 69 |
| BsaAI | YACGTR | 1 cut(s) | 289 |
| BsaJI | CCNNGG | 4 cut(s) | 84, 141, 164, 205 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 89, 231, 246 |
| BseBI | CCWGG | 1 cut(s) | 165 |
| BseDI | CCNNGG | 4 cut(s) | 84, 141, 164, 205 |
| BseGI | GGATG | 4 cut(s) | 57, 94, 151, 281 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 89, 231, 246 |
| BshNI | GGYRCC | 1 cut(s) | 299 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 89, 231, 246 |
| BsmAI | GTCTC | 2 cut(s) | 4, 108 |
| BsmBI | CGTCTC | 1 cut(s) | 4 |
| BspACI | CCGC | 1 cut(s) | 68 |
| BspLI | GGNNCC | 1 cut(s) | 301 |
| BspT107I | GGYRCC | 1 cut(s) | 299 |
| BsrBI | CCGCTC | 1 cut(s) | 68 |
| BssECI | CCNNGG | 4 cut(s) | 84, 141, 164, 205 |
| Bst2UI | CCWGG | 1 cut(s) | 165 |
| BstBAI | YACGTR | 1 cut(s) | 289 |
| BstDSI | CCRYGG | 2 cut(s) | 141, 205 |
| BstF5I | GGATG | 4 cut(s) | 57, 94, 151, 281 |
| BstHHI | GCGC | 1 cut(s) | 237 |
| BstMAI | GTCTC | 2 cut(s) | 4, 108 |
| BstNI | CCWGG | 1 cut(s) | 165 |
| BstSCI | CCNGG | 1 cut(s) | 163 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 148 |
| BtgI | CCRYGG | 2 cut(s) | 141, 205 |
| BtsCI | GGATG | 4 cut(s) | 57, 94, 151, 281 |
| CfoI | GCGC | 1 cut(s) | 237 |
| Csp6I | GTAC | 2 cut(s) | 290, 300 |
| CviQI | GTAC | 2 cut(s) | 290, 300 |
| EcoRII | CCWGG | 1 cut(s) | 163 |
| Esp3I | CGTCTC | 1 cut(s) | 4 |
| FaiI | YATR | 1 cut(s) | 128 |
| FauI | CCCGC | 1 cut(s) | 61 |
| FokI | GGATG | 4 cut(s) | 64, 101, 158, 268 |
| GlaI | GCGC | 1 cut(s) | 236 |
| HhaI | GCGC | 1 cut(s) | 237 |
| Hin6I | GCGC | 1 cut(s) | 235 |
| HinP1I | GCGC | 1 cut(s) | 235 |
| HinfI | GANTC | 1 cut(s) | 156 |
| HphI | GGTGA | 2 cut(s) | 181, 182 |
| Hpy188I | TCNGA | 1 cut(s) | 88 |
| HpyAV | CCTTC | 1 cut(s) | 104 |
| HpyCH4IV | ACGT | 2 cut(s) | 244, 288 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpySE526I | ACGT | 2 cut(s) | 244, 288 |
| HspAI | GCGC | 1 cut(s) | 235 |
| KpnI | GGTACC | 1 cut(s) | 303 |
| LmnI | GCTCC | 2 cut(s) | 65, 71 |
| LpnPI | CCDG | 3 cut(s) | 34, 150, 177 |
| LweI | GCATC | 1 cut(s) | 69 |
| MaeII | ACGT | 2 cut(s) | 244, 288 |
| MbiI | CCGCTC | 1 cut(s) | 68 |
| MboII | GAAGA | 2 cut(s) | 116, 119 |
| MluCI | AATT | 2 cut(s) | 129, 185 |
| MlyI | GAGTC | 1 cut(s) | 165 |
| MnlI | CCTC | 4 cut(s) | 94, 94, 115, 166 |
| MslI | CAYNNNNRTG | 1 cut(s) | 146 |
| MspR9I | CCNGG | 1 cut(s) | 165 |
| MvaI | CCWGG | 1 cut(s) | 165 |
| NlaIV | GGNNCC | 1 cut(s) | 301 |
| OliI | CACNNNNGTG | 1 cut(s) | 146 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 223 |
| PleI | GAGTC | 1 cut(s) | 164 |
| PpsI | GAGTC | 1 cut(s) | 164 |
| Ppu21I | YACGTR | 1 cut(s) | 289 |
| PsiI | TTATAA | 1 cut(s) | 128 |
| Psp6I | CCWGG | 1 cut(s) | 163 |
| PspGI | CCWGG | 1 cut(s) | 163 |
| PspN4I | GGNNCC | 1 cut(s) | 301 |
| RsaI | GTAC | 2 cut(s) | 291, 301 |
| RsaNI | GTAC | 2 cut(s) | 290, 300 |
| RseI | CAYNNNNRTG | 1 cut(s) | 146 |
| SchI | GAGTC | 1 cut(s) | 165 |
| ScrFI | CCNGG | 1 cut(s) | 165 |
| SetI | ASST | 5 cut(s) | 126, 177, 247, 291, 305 |
| SfaNI | GCATC | 1 cut(s) | 69 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 146 |
| Sse9I | AATT | 2 cut(s) | 129, 185 |
| SsiI | CCGC | 1 cut(s) | 68 |
| StyD4I | CCNGG | 1 cut(s) | 163 |
| TaiI | ACGT | 2 cut(s) | 247, 291 |
| TasI | AATT | 2 cut(s) | 129, 185 |
| TspGWI | ACGGA | 7 cut(s) | 33, 38, 73, 78, 158, 265, 266 |
| XapI | RAATTY | 1 cut(s) | 185 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 293 |