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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G47970 |
| fragaria_vesca | FvH4_4g20460 |
| malus_domestica | MD13G1149500.v1.1 MD16G1149800.v1.1 |
| prunus_persica | Prupe.1G113500_v2.0.a1 Prupe.1G113500_v2.0.a1 Prupe.1G113500_v2.0.a1 |
| pyrus_communis | pycom13g12870 pycom16g12830 |
| rosa_chinensis | RchiOBHm_Chr4g0425941 |
| rosa_laevigata | RLG00000004628 RLG00000007330 RLG00000015867 RLG00000027658 |
| rosa_roxburghii | Rroxscaffold_5G00367950 |
| rosa_rugosa | Rorug04G0207200 Rorug04G0207300.1 Rorug04G0207400 Rorug04G0207500 |
| rosa_samantha | Rh3DG073600 Rh4AG264400 Rh4BG270300 Rh4CG282900 Rh4DG266800 Rh5BG314700 Rh6DG338900 |
| rosa_wichuraiana | Rw4G022830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 164, 260 |
| AciI | CCGC | 4 cut(s) | 164, 260, 306, 403 |
| AcyI | GRCGYC | 1 cut(s) | 132 |
| AdeI | CACNNNGTG | 1 cut(s) | 262 |
| AfaI | GTAC | 3 cut(s) | 71, 231, 395 |
| AluBI | AGCT | 2 cut(s) | 67, 382 |
| AluI | AGCT | 2 cut(s) | 67, 382 |
| Alw26I | GTCTC | 1 cut(s) | 589 |
| AoxI | GGCC | 1 cut(s) | 244 |
| AspS9I | GGNCC | 1 cut(s) | 245 |
| AsuHPI | GGTGA | 2 cut(s) | 320, 584 |
| BanII | GRGCYC | 1 cut(s) | 453 |
| BauI | CACGAG | 1 cut(s) | 221 |
| BbsI | GAAGAC | 2 cut(s) | 183, 279 |
| BbvCI | CCTCAGC | 2 cut(s) | 366, 420 |
| BccI | CCATC | 3 cut(s) | 317, 563, 569 |
| BcoDI | GTCTC | 1 cut(s) | 589 |
| BfaI | CTAG | 1 cut(s) | 383 |
| BmgT120I | GGNCC | 1 cut(s) | 245 |
| BmiI | GGNNCC | 1 cut(s) | 516 |
| BmrI | ACTGGG | 1 cut(s) | 401 |
| BmsI | GCATC | 2 cut(s) | 424, 484 |
| BmuI | ACTGGG | 1 cut(s) | 401 |
| BpiI | GAAGAC | 2 cut(s) | 183, 279 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 584 |
| Bpu10I | CCTNAGC | 2 cut(s) | 366, 420 |
| BsaHI | GRCGYC | 1 cut(s) | 132 |
| BsaI | GGTCTC | 1 cut(s) | 589 |
| BsaJI | CCNNGG | 1 cut(s) | 102 |
| BsaWI | WCCGGW | 1 cut(s) | 250 |
| Bse1I | ACTGG | 1 cut(s) | 407 |
| BseDI | CCNNGG | 1 cut(s) | 102 |
| BseGI | GGATG | 3 cut(s) | 148, 172, 430 |
| BseMII | CTCAG | 4 cut(s) | 357, 381, 411, 564 |
| BseNI | ACTGG | 1 cut(s) | 407 |
| BseRI | GAGGAG | 4 cut(s) | 134, 137, 140, 594 |
| Bsh1236I | CGCG | 2 cut(s) | 164, 260 |
| BshFI | GGCC | 1 cut(s) | 246 |
| BsiSI | CCGG | 1 cut(s) | 251 |
| BsmAI | GTCTC | 1 cut(s) | 589 |
| BsnI | GGCC | 1 cut(s) | 246 |
| Bso31I | GGTCTC | 1 cut(s) | 589 |
| Bsp1286I | GDGCHC | 1 cut(s) | 453 |
| Bsp143I | GATC | 1 cut(s) | 533 |
| BspACI | CCGC | 4 cut(s) | 164, 260, 306, 403 |
| BspANI | GGCC | 1 cut(s) | 246 |
| BspCNI | CTCAG | 4 cut(s) | 358, 382, 412, 563 |
| BspFNI | CGCG | 2 cut(s) | 164, 260 |
| BspLI | GGNNCC | 1 cut(s) | 516 |
| BspQI | GCTCTTC | 2 cut(s) | 372, 474 |
| BspTNI | GGTCTC | 1 cut(s) | 589 |
| BsrI | ACTGG | 1 cut(s) | 407 |
| BssECI | CCNNGG | 1 cut(s) | 102 |
| BssMI | GATC | 1 cut(s) | 533 |
| BssNI | GRCGYC | 1 cut(s) | 132 |
| BssSI | CACGAG | 1 cut(s) | 221 |
| Bst2BI | CACGAG | 1 cut(s) | 221 |
| Bst4CI | ACNGT | 1 cut(s) | 234 |
| Bst6I | CTCTTC | 5 cut(s) | 192, 366, 372, 450, 474 |
| BstACI | GRCGYC | 1 cut(s) | 132 |
| BstC8I | GCNNGC | 1 cut(s) | 439 |
| BstDEI | CTNAG | 4 cut(s) | 366, 390, 420, 550 |
| BstF5I | GGATG | 3 cut(s) | 148, 172, 430 |
| BstFNI | CGCG | 2 cut(s) | 164, 260 |
| BstKTI | GATC | 1 cut(s) | 536 |
| BstMAI | GTCTC | 1 cut(s) | 589 |
| BstMBI | GATC | 1 cut(s) | 533 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 64 |
| BstUI | CGCG | 2 cut(s) | 164, 260 |
| BstV2I | GAAGAC | 2 cut(s) | 183, 279 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 61 |
| BsuRI | GGCC | 1 cut(s) | 246 |
| BtgZI | GCGATG | 1 cut(s) | 504 |
| BtsCI | GGATG | 3 cut(s) | 148, 172, 430 |
| Cac8I | GCNNGC | 1 cut(s) | 439 |
| Cfr13I | GGNCC | 1 cut(s) | 245 |
| CseI | GACGC | 2 cut(s) | 140, 170 |
| Csp6I | GTAC | 3 cut(s) | 70, 230, 394 |
| CviJI | RGCY | 8 cut(s) | 8, 43, 67, 246, 365, 382, 451, 515 |
| CviKI_1 | RGCY | 8 cut(s) | 8, 43, 67, 246, 365, 382, 451, 515 |
| CviQI | GTAC | 3 cut(s) | 70, 230, 394 |
| DdeI | CTNAG | 4 cut(s) | 366, 390, 420, 550 |
| DpnI | GATC | 1 cut(s) | 535 |
| DpnII | GATC | 1 cut(s) | 533 |
| DraIII | CACNNNGTG | 1 cut(s) | 262 |
| Eam1104I | CTCTTC | 5 cut(s) | 192, 366, 372, 450, 474 |
| EarI | CTCTTC | 5 cut(s) | 192, 366, 372, 450, 474 |
| EciI | GGCGGA | 1 cut(s) | 392 |
| Eco24I | GRGCYC | 1 cut(s) | 453 |
| Eco31I | GGTCTC | 1 cut(s) | 589 |
| EcoT38I | GRGCYC | 1 cut(s) | 453 |
| FaiI | YATR | 1 cut(s) | 11 |
| FokI | GGATG | 3 cut(s) | 155, 179, 437 |
| FriOI | GRGCYC | 1 cut(s) | 453 |
| FspBI | CTAG | 1 cut(s) | 383 |
| HaeIII | GGCC | 1 cut(s) | 246 |
| HapII | CCGG | 1 cut(s) | 251 |
| HgaI | GACGC | 2 cut(s) | 140, 170 |
| Hin1I | GRCGYC | 1 cut(s) | 132 |
| HinfI | GANTC | 5 cut(s) | 74, 86, 92, 98, 548 |
| HpaII | CCGG | 1 cut(s) | 251 |
| HphI | GGTGA | 2 cut(s) | 320, 584 |
| Hpy166II | GTNNAC | 3 cut(s) | 220, 256, 265 |
| Hpy188I | TCNGA | 6 cut(s) | 85, 91, 97, 103, 538, 553 |
| Hpy188III | TCNNGA | 1 cut(s) | 221 |
| Hpy8I | GTNNAC | 3 cut(s) | 220, 256, 265 |
| HpyAV | CCTTC | 2 cut(s) | 296, 499 |
| HpyCH4III | ACNGT | 1 cut(s) | 234 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 64 |
| HpyF3I | CTNAG | 4 cut(s) | 366, 390, 420, 550 |
| Hsp92I | GRCGYC | 1 cut(s) | 132 |
| Kzo9I | GATC | 1 cut(s) | 533 |
| LguI | GCTCTTC | 2 cut(s) | 372, 474 |
| LmnI | GCTCC | 2 cut(s) | 64, 520 |
| LpnPI | CCDG | 5 cut(s) | 225, 264, 420, 470, 483 |
| LweI | GCATC | 2 cut(s) | 424, 484 |
| MaeI | CTAG | 1 cut(s) | 383 |
| MaeIII | GTNAC | 1 cut(s) | 308 |
| MalI | GATC | 1 cut(s) | 535 |
| MboI | GATC | 1 cut(s) | 533 |
| MboII | GAAGA | 9 cut(s) | 188, 209, 284, 383, 389, 443, 467, 485, 491 |
| MfeI | CAATTG | 1 cut(s) | 59 |
| MhlI | GDGCHC | 1 cut(s) | 453 |
| MluCI | AATT | 1 cut(s) | 59 |
| MlyI | GAGTC | 5 cut(s) | 83, 95, 101, 107, 542 |
| MseI | TTAA | 1 cut(s) | 39 |
| MspI | CCGG | 1 cut(s) | 251 |
| MunI | CAATTG | 1 cut(s) | 59 |
| MvnI | CGCG | 2 cut(s) | 164, 260 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 64 |
| NdeII | GATC | 1 cut(s) | 533 |
| NlaIV | GGNNCC | 1 cut(s) | 516 |
| NmuCI | GTSAC | 1 cut(s) | 308 |
| PciSI | GCTCTTC | 2 cut(s) | 372, 474 |
| PleI | GAGTC | 5 cut(s) | 82, 94, 100, 106, 542 |
| PpsI | GAGTC | 5 cut(s) | 82, 94, 100, 106, 542 |
| PspN4I | GGNNCC | 1 cut(s) | 516 |
| PspPI | GGNCC | 1 cut(s) | 245 |
| RsaI | GTAC | 3 cut(s) | 71, 231, 395 |
| RsaNI | GTAC | 3 cut(s) | 70, 230, 394 |
| SapI | GCTCTTC | 2 cut(s) | 372, 474 |
| SaqAI | TTAA | 1 cut(s) | 39 |
| Sau3AI | GATC | 1 cut(s) | 533 |
| Sau96I | GGNCC | 1 cut(s) | 245 |
| SchI | GAGTC | 5 cut(s) | 83, 95, 101, 107, 542 |
| SduI | GDGCHC | 1 cut(s) | 453 |
| SetI | ASST | 6 cut(s) | 69, 228, 384, 399, 415, 510 |
| SfaNI | GCATC | 2 cut(s) | 424, 484 |
| Sse9I | AATT | 1 cut(s) | 59 |
| SsiI | CCGC | 4 cut(s) | 164, 260, 306, 403 |
| SspMI | CTAG | 1 cut(s) | 383 |
| TaaI | ACNGT | 1 cut(s) | 234 |
| TasI | AATT | 1 cut(s) | 59 |
| Tru1I | TTAA | 1 cut(s) | 39 |
| Tru9I | TTAA | 1 cut(s) | 39 |
| TseFI | GTSAC | 1 cut(s) | 308 |
| Tsp45I | GTSAC | 1 cut(s) | 308 |
| TspDTI | ATGAA | 3 cut(s) | 17, 486, 492 |
| XspI | CTAG | 1 cut(s) | 383 |