No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G47970 |
| fragaria_vesca | FvH4_4g20460 |
| malus_domestica | MD13G1149500.v1.1 MD16G1149800.v1.1 |
| prunus_persica | Prupe.1G113500_v2.0.a1 Prupe.1G113500_v2.0.a1 Prupe.1G113500_v2.0.a1 |
| pyrus_communis | pycom13g12870 pycom16g12830 |
| rosa_chinensis | RchiOBHm_Chr4g0425941 |
| rosa_laevigata | RLG00000004628 RLG00000007330 RLG00000015867 RLG00000027658 |
| rosa_roxburghii | Rroxscaffold_5G00367950 |
| rosa_rugosa | Rorug04G0207200 Rorug04G0207300.1 Rorug04G0207400 Rorug04G0207500 |
| rosa_samantha | Rh3DG073600 Rh4AG264400 Rh4BG270300 Rh4CG282900 Rh4DG266800 Rh5BG314700 Rh6DG338900 |
| rosa_wichuraiana | Rw4G022830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 56, 167 |
| AcuI | CTGAAG | 1 cut(s) | 111 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 58 |
| AgsI | TTSAA | 1 cut(s) | 86 |
| Alw26I | GTCTC | 1 cut(s) | 229 |
| AoxI | GGCC | 1 cut(s) | 41 |
| BccI | CCATC | 1 cut(s) | 209 |
| BcoDI | GTCTC | 1 cut(s) | 229 |
| BmiI | GGNNCC | 1 cut(s) | 165 |
| BmsI | GCATC | 1 cut(s) | 61 |
| BsaI | GGTCTC | 1 cut(s) | 229 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 58 |
| Bse1I | ACTGG | 1 cut(s) | 44 |
| BseGI | GGATG | 4 cut(s) | 67, 136, 199, 232 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 58 |
| BseNI | ACTGG | 1 cut(s) | 44 |
| BshFI | GGCC | 1 cut(s) | 43 |
| BslFI | GGGAC | 1 cut(s) | 37 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 58 |
| BsmAI | GTCTC | 1 cut(s) | 229 |
| BsmFI | GGGAC | 1 cut(s) | 37 |
| BsnI | GGCC | 1 cut(s) | 43 |
| Bso31I | GGTCTC | 1 cut(s) | 229 |
| Bsp143I | GATC | 1 cut(s) | 182 |
| BspACI | CCGC | 2 cut(s) | 56, 167 |
| BspANI | GGCC | 1 cut(s) | 43 |
| BspLI | GGNNCC | 1 cut(s) | 165 |
| BspTNI | GGTCTC | 1 cut(s) | 229 |
| BsrI | ACTGG | 1 cut(s) | 44 |
| BssMI | GATC | 1 cut(s) | 182 |
| Bst6I | CTCTTC | 3 cut(s) | 87, 120, 173 |
| BstDEI | CTNAG | 1 cut(s) | 243 |
| BstF5I | GGATG | 4 cut(s) | 67, 136, 199, 232 |
| BstKTI | GATC | 1 cut(s) | 185 |
| BstMAI | GTCTC | 1 cut(s) | 229 |
| BstMBI | GATC | 1 cut(s) | 182 |
| BsuRI | GGCC | 1 cut(s) | 43 |
| BtsCI | GGATG | 4 cut(s) | 67, 136, 199, 232 |
| CseI | GACGC | 1 cut(s) | 152 |
| CviJI | RGCY | 3 cut(s) | 43, 50, 164 |
| CviKI_1 | RGCY | 3 cut(s) | 43, 50, 164 |
| DdeI | CTNAG | 1 cut(s) | 243 |
| DpnI | GATC | 1 cut(s) | 184 |
| DpnII | GATC | 1 cut(s) | 182 |
| Eam1104I | CTCTTC | 3 cut(s) | 87, 120, 173 |
| EarI | CTCTTC | 3 cut(s) | 87, 120, 173 |
| EciI | GGCGGA | 1 cut(s) | 156 |
| Eco31I | GGTCTC | 1 cut(s) | 229 |
| Eco57I | CTGAAG | 1 cut(s) | 111 |
| FaqI | GGGAC | 1 cut(s) | 37 |
| FokI | GGATG | 4 cut(s) | 74, 143, 206, 239 |
| HaeIII | GGCC | 1 cut(s) | 43 |
| HgaI | GACGC | 1 cut(s) | 152 |
| HinfI | GANTC | 1 cut(s) | 197 |
| Hpy188I | TCNGA | 2 cut(s) | 187, 202 |
| Hpy99I | CGWCG | 1 cut(s) | 140 |
| HpyAV | CCTTC | 1 cut(s) | 148 |
| HpyCH4V | TGCA | 1 cut(s) | 74 |
| HpyF3I | CTNAG | 1 cut(s) | 243 |
| Kzo9I | GATC | 1 cut(s) | 182 |
| LmnI | GCTCC | 1 cut(s) | 169 |
| LpnPI | CCDG | 3 cut(s) | 57, 102, 132 |
| LweI | GCATC | 1 cut(s) | 61 |
| MalI | GATC | 1 cut(s) | 184 |
| MboI | GATC | 1 cut(s) | 182 |
| MboII | GAAGA | 7 cut(s) | 80, 104, 116, 122, 134, 137, 190 |
| MnlI | CCTC | 8 cut(s) | 52, 58, 112, 121, 154, 168, 217, 250 |
| NdeII | GATC | 1 cut(s) | 182 |
| NlaIV | GGNNCC | 1 cut(s) | 165 |
| PfeI | GAWTC | 1 cut(s) | 197 |
| PspN4I | GGNNCC | 1 cut(s) | 165 |
| Sau3AI | GATC | 1 cut(s) | 182 |
| SetI | ASST | 3 cut(s) | 36, 91, 159 |
| SfaNI | GCATC | 1 cut(s) | 61 |
| SgeI | CNNG | 8 cut(s) | 47, 56, 63, 65, 87, 101, 159, 202 |
| SsiI | CCGC | 2 cut(s) | 56, 167 |
| TfiI | GAWTC | 1 cut(s) | 197 |
| TspDTI | ATGAA | 1 cut(s) | 123 |