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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G47970 |
| fragaria_vesca | FvH4_4g20460 |
| malus_domestica | MD13G1149500.v1.1 MD16G1149800.v1.1 |
| prunus_persica | Prupe.1G113500_v2.0.a1 Prupe.1G113500_v2.0.a1 Prupe.1G113500_v2.0.a1 |
| pyrus_communis | pycom13g12870 pycom16g12830 |
| rosa_chinensis | RchiOBHm_Chr4g0425941 |
| rosa_laevigata | RLG00000004628 RLG00000007330 RLG00000015867 RLG00000027658 |
| rosa_roxburghii | Rroxscaffold_5G00367950 |
| rosa_rugosa | Rorug04G0207200 Rorug04G0207300.1 Rorug04G0207400 Rorug04G0207500 |
| rosa_samantha | Rh3DG073600 Rh4AG264400 Rh4BG270300 Rh4CG282900 Rh4DG266800 Rh5BG314700 Rh6DG338900 |
| rosa_wichuraiana | Rw4G022830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 215 |
| AatII | GACGTC | 1 cut(s) | 219 |
| AccII | CGCG | 1 cut(s) | 167 |
| AciI | CCGC | 2 cut(s) | 167, 539 |
| AcuI | CTGAAG | 2 cut(s) | 330, 483 |
| AcyI | GRCGYC | 1 cut(s) | 216 |
| AfaI | GTAC | 2 cut(s) | 71, 231 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 430 |
| AgsI | TTSAA | 1 cut(s) | 458 |
| AjnI | CCWGG | 1 cut(s) | 219 |
| Alw26I | GTCTC | 1 cut(s) | 601 |
| AoxI | GGCC | 3 cut(s) | 106, 244, 413 |
| AspLEI | GCGC | 1 cut(s) | 308 |
| AspS9I | GGNCC | 1 cut(s) | 245 |
| BbsI | GAAGAC | 3 cut(s) | 120, 144, 300 |
| BccI | CCATC | 1 cut(s) | 581 |
| BceAI | ACGGC | 4 cut(s) | 121, 145, 349, 382 |
| BciT130I | CCWGG | 1 cut(s) | 221 |
| BcoDI | GTCTC | 1 cut(s) | 601 |
| BfoI | RGCGCY | 1 cut(s) | 309 |
| Bme1390I | CCNGG | 1 cut(s) | 221 |
| BmgT120I | GGNCC | 1 cut(s) | 245 |
| BmiI | GGNNCC | 1 cut(s) | 537 |
| BmrFI | CCNGG | 1 cut(s) | 221 |
| BmsI | GCATC | 1 cut(s) | 433 |
| BpiI | GAAGAC | 3 cut(s) | 120, 144, 300 |
| BsaHI | GRCGYC | 1 cut(s) | 216 |
| BsaI | GGTCTC | 1 cut(s) | 601 |
| BsaJI | CCNNGG | 1 cut(s) | 54 |
| BsaWI | WCCGGW | 2 cut(s) | 239, 250 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 430 |
| Bse1I | ACTGG | 2 cut(s) | 416, 523 |
| BseBI | CCWGG | 1 cut(s) | 221 |
| BseDI | CCNNGG | 1 cut(s) | 54 |
| BseGI | GGATG | 9 cut(s) | 151, 175, 202, 385, 391, 439, 508, 571, 604 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 430 |
| BseNI | ACTGG | 2 cut(s) | 416, 523 |
| BseRI | GAGGAG | 1 cut(s) | 506 |
| BsgI | GTGCAG | 1 cut(s) | 447 |
| Bsh1236I | CGCG | 1 cut(s) | 167 |
| BshFI | GGCC | 3 cut(s) | 108, 246, 415 |
| BsiSI | CCGG | 2 cut(s) | 240, 251 |
| BslFI | GGGAC | 1 cut(s) | 409 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 430 |
| BsmAI | GTCTC | 1 cut(s) | 601 |
| BsmFI | GGGAC | 1 cut(s) | 409 |
| BsnI | GGCC | 3 cut(s) | 108, 246, 415 |
| Bso31I | GGTCTC | 1 cut(s) | 601 |
| Bsp143I | GATC | 1 cut(s) | 554 |
| BspACI | CCGC | 2 cut(s) | 167, 539 |
| BspANI | GGCC | 3 cut(s) | 108, 246, 415 |
| BspFNI | CGCG | 1 cut(s) | 167 |
| BspLI | GGNNCC | 1 cut(s) | 537 |
| BspTNI | GGTCTC | 1 cut(s) | 601 |
| BsrI | ACTGG | 2 cut(s) | 416, 523 |
| BssECI | CCNNGG | 1 cut(s) | 54 |
| BssMI | GATC | 1 cut(s) | 554 |
| BssNI | GRCGYC | 1 cut(s) | 216 |
| Bst2UI | CCWGG | 1 cut(s) | 221 |
| Bst4CI | ACNGT | 1 cut(s) | 234 |
| Bst6I | CTCTTC | 4 cut(s) | 117, 459, 492, 545 |
| BstACI | GRCGYC | 1 cut(s) | 216 |
| BstDEI | CTNAG | 1 cut(s) | 615 |
| BstF5I | GGATG | 9 cut(s) | 151, 175, 202, 385, 391, 439, 508, 571, 604 |
| BstFNI | CGCG | 1 cut(s) | 167 |
| BstH2I | RGCGCY | 1 cut(s) | 309 |
| BstHHI | GCGC | 1 cut(s) | 308 |
| BstKTI | GATC | 1 cut(s) | 557 |
| BstMAI | GTCTC | 1 cut(s) | 601 |
| BstMBI | GATC | 1 cut(s) | 554 |
| BstNI | CCWGG | 1 cut(s) | 221 |
| BstSCI | CCNGG | 1 cut(s) | 219 |
| BstUI | CGCG | 1 cut(s) | 167 |
| BstV2I | GAAGAC | 3 cut(s) | 120, 144, 300 |
| BsuRI | GGCC | 3 cut(s) | 108, 246, 415 |
| BtgZI | GCGATG | 1 cut(s) | 333 |
| BtsCI | GGATG | 9 cut(s) | 151, 175, 202, 385, 391, 439, 508, 571, 604 |
| CfoI | GCGC | 1 cut(s) | 308 |
| Cfr13I | GGNCC | 1 cut(s) | 245 |
| CseI | GACGC | 1 cut(s) | 173 |
| Csp6I | GTAC | 2 cut(s) | 70, 230 |
| CviJI | RGCY | 6 cut(s) | 43, 108, 246, 415, 422, 536 |
| CviKI_1 | RGCY | 6 cut(s) | 43, 108, 246, 415, 422, 536 |
| CviQI | GTAC | 2 cut(s) | 70, 230 |
| DdeI | CTNAG | 1 cut(s) | 615 |
| DpnI | GATC | 1 cut(s) | 556 |
| DpnII | GATC | 1 cut(s) | 554 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 215 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 215 |
| Eam1104I | CTCTTC | 4 cut(s) | 117, 459, 492, 545 |
| EarI | CTCTTC | 4 cut(s) | 117, 459, 492, 545 |
| EciI | GGCGGA | 1 cut(s) | 528 |
| Eco31I | GGTCTC | 1 cut(s) | 601 |
| Eco57I | CTGAAG | 2 cut(s) | 330, 483 |
| EcoRII | CCWGG | 1 cut(s) | 219 |
| FaiI | YATR | 1 cut(s) | 11 |
| FaqI | GGGAC | 1 cut(s) | 409 |
| FokI | GGATG | 9 cut(s) | 158, 182, 209, 392, 398, 446, 515, 578, 611 |
| GlaI | GCGC | 1 cut(s) | 307 |
| HaeII | RGCGCY | 1 cut(s) | 309 |
| HaeIII | GGCC | 3 cut(s) | 108, 246, 415 |
| HapII | CCGG | 2 cut(s) | 240, 251 |
| HgaI | GACGC | 1 cut(s) | 173 |
| HhaI | GCGC | 1 cut(s) | 308 |
| Hin1I | GRCGYC | 1 cut(s) | 216 |
| Hin6I | GCGC | 1 cut(s) | 306 |
| HinP1I | GCGC | 1 cut(s) | 306 |
| HinfI | GANTC | 4 cut(s) | 74, 86, 95, 569 |
| HpaII | CCGG | 2 cut(s) | 240, 251 |
| Hpy188I | TCNGA | 5 cut(s) | 85, 94, 100, 559, 574 |
| HpyAV | CCTTC | 3 cut(s) | 296, 305, 520 |
| HpyCH4III | ACNGT | 1 cut(s) | 234 |
| HpyCH4IV | ACGT | 1 cut(s) | 216 |
| HpyCH4V | TGCA | 2 cut(s) | 428, 446 |
| HpyF3I | CTNAG | 1 cut(s) | 615 |
| HpySE526I | ACGT | 1 cut(s) | 216 |
| Hsp92I | GRCGYC | 1 cut(s) | 216 |
| HspAI | GCGC | 1 cut(s) | 306 |
| Kzo9I | GATC | 1 cut(s) | 554 |
| LmnI | GCTCC | 2 cut(s) | 64, 541 |
| LpnPI | CCDG | 7 cut(s) | 206, 233, 253, 264, 429, 474, 504 |
| LweI | GCATC | 1 cut(s) | 433 |
| MaeII | ACGT | 1 cut(s) | 216 |
| MalI | GATC | 1 cut(s) | 556 |
| MboI | GATC | 1 cut(s) | 554 |
| MluCI | AATT | 1 cut(s) | 59 |
| MlyI | GAGTC | 3 cut(s) | 83, 89, 95 |
| MmeI | TCCRAC | 2 cut(s) | 117, 123 |
| MspI | CCGG | 2 cut(s) | 240, 251 |
| MspR9I | CCNGG | 1 cut(s) | 221 |
| MvaI | CCWGG | 1 cut(s) | 221 |
| MvnI | CGCG | 1 cut(s) | 167 |
| NdeII | GATC | 1 cut(s) | 554 |
| NlaIV | GGNNCC | 1 cut(s) | 537 |
| NmeAIII | GCCGAG | 1 cut(s) | 79 |
| PfeI | GAWTC | 1 cut(s) | 569 |
| PflFI | GACNNNGTC | 1 cut(s) | 215 |
| PfoI | TCCNGGA | 1 cut(s) | 219 |
| PleI | GAGTC | 3 cut(s) | 82, 89, 94 |
| PpsI | GAGTC | 3 cut(s) | 82, 89, 94 |
| Psp6I | CCWGG | 1 cut(s) | 219 |
| PspGI | CCWGG | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 1 cut(s) | 537 |
| PspPI | GGNCC | 1 cut(s) | 245 |
| PsyI | GACNNNGTC | 1 cut(s) | 215 |
| RsaI | GTAC | 2 cut(s) | 71, 231 |
| RsaNI | GTAC | 2 cut(s) | 70, 230 |
| Sau3AI | GATC | 1 cut(s) | 554 |
| Sau96I | GGNCC | 1 cut(s) | 245 |
| SchI | GAGTC | 3 cut(s) | 83, 89, 95 |
| ScrFI | CCNGG | 1 cut(s) | 221 |
| SetI | ASST | 6 cut(s) | 9, 219, 228, 408, 463, 531 |
| SfaNI | GCATC | 1 cut(s) | 433 |
| Sse9I | AATT | 1 cut(s) | 59 |
| SsiI | CCGC | 2 cut(s) | 167, 539 |
| StyD4I | CCNGG | 1 cut(s) | 219 |
| TaaI | ACNGT | 1 cut(s) | 234 |
| TaiI | ACGT | 1 cut(s) | 219 |
| TaqI | TCGA | 1 cut(s) | 111 |
| TasI | AATT | 1 cut(s) | 59 |
| TfiI | GAWTC | 1 cut(s) | 569 |
| TspDTI | ATGAA | 3 cut(s) | 17, 213, 495 |
| TspGWI | ACGGA | 1 cut(s) | 67 |
| Tth111I | GACNNNGTC | 1 cut(s) | 215 |
| ZraI | GACGTC | 1 cut(s) | 217 |