pycom17g07580
TCP Family

assists the folding of proteins upon ATP hydrolysis

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
5512463 .. 5516532
4070 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g07580.15

Sequence Viewer

Length: 1608 bp
ATGTCGATTCGAGTGCTGAATCCGAATGCGGAAGTGCTGAACAAATCGGCGGCGCTGCACATGAACATCAACGCCGCCAAGGGCTTGCAGGACGTTCTCAAGACCAACCTCGGCCCCAAGGGCACCATCAAAATGCTTGTTGGTGGAGCTGGCGACATTAAGCTCACAAAGGATGGCAACACTCTGCTCAAAGAAATGCAAATTCAGAACCCAACAGCAATTATGATTGCAAGGACCGCTGTTGCCCAAGATGACATAAGCGGAGATGGCACCACCTCTACTGTCTTATTCATTGGCGAGCTTATGAAACAATCAGAGCGATACATTGATGAAGGGATGCATCCCCGTGTCCTAGTTGATGGTTTTGAGATTGCCAAAAGAGCAACGCTTCAGTTTCTTGAGAAATTCAAAACTCCTGTTGTGATGGGCAATGAGCCCGACAAAGAGATTCTGAAAATGGTAGCAAGGACAACATTGCGAACAAAGTTATATGAAGCATTGGCGGATCAATTGACCGACATAGTTGTTAATTCGGTTCTTTGCATTCGTAAACCTGAGGAACCCATTGATCTGTTTATGGTGGAGATTATGCACATGCGACACAAATTTGATGTAGACACACGTTTGGTTGAGGGTCTTGTTCTGGATCATGGTTCTAGGCATCCTGATATGAAGAGGAGAGCAGAGAATTGTTACATCTTGACAAGCAATGTATCTTTGGAGTATGATAAAAGTGAAGTAAACTCAGGCTTTTTCTATTCAAATGCGGAGCAGCGAGAAGCAATGGTTTTAGCTGAAAGGCGTCAGGTTGATGAAAGAGTTAAAAAAATCATTGAACTGAAAAATAAGGTTTGCTCTGGTAATGATAATAATTTTGTCGTTATCAATCAGAAGGGAATTGATCCCCCATCTCTGGATCTCCTTGCAAGGGCAGGGATTATTGCCTTGAGAAGAGCAAAGAGGAGAAATATGGAACGGTTGGTTTTGGCTTGTGGCGGGGAGGCTGTGAACTCCGTAGATGATCTCACTCATGATTGCCTTGGTTGGGCTGGACTTGTATACGAGCATGTCCTTGGTGAAGAGAAGTATACATTTGTTGAAAATGTGAAAAACCCCCATTCTTGCACAATCTTGATCAAAGGACCCAATGACCATACAATTGCTCAGATTAAGGATGCTGTTCGTGATGGTCTGAGGGCAGTTAAAAACACAGTTGAAGATGAAGCTGTCATCTTAGGTGCTGGAGCTTTTGAAGTTGCAGCCAGACAATATCTAGTAAACGAAGTGAAGAAAACTGTTAAAGGGCGCGCTCAACTAGGCGTTGAAGCTTTTGCTGATGCTCTCCTTGTGGTACCCAAGACACTTGCTGAGAATTCTGGCCTCGATACGCAAGATGTGATAATTGCCCTTACGGGAGAGCATGATCAGGGAAATGTTGTGGGACTAAATCACAACACTGGAGAACCGCTTGACCCACAGATGGAGGGTATCTTTGACAACTACTCTGTGAAGCGACAGATTATAAACTCAGGGCCTGTAATTGCATCTCAACTGTTGTTGGTCGATGAAGTAATTCGTGCTGGGCGTAACATGCGGAAGCCAACTTAA

Protein Analysis

536

Amino Acids

59.14

Weight (kDa)

6.12

Isoelectric Point (pI)

31.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1523
Acc65I GGTACC 1 cut(s) 1351
AccB1I GGYRCC 3 cut(s) 122, 269, 1351
AccI GTMKAC 3 cut(s) 615, 1059, 1088
AccII CGCG 1 cut(s) 1308
AclWI GGATC 4 cut(s) 513, 654, 896, 924
AcsI RAATTY 4 cut(s) 201, 404, 605, 1372
AcuI CTGAAG 1 cut(s) 374
AcyI GRCGYC 1 cut(s) 802
AfaI GTAC 1 cut(s) 1353
AfiI CCNNNNNNNGG 4 cut(s) 913, 928, 1045, 1480
AflIII ACRYGT 1 cut(s) 620
AgsI TTSAA 7 cut(s) 409, 762, 836, 1100, 1217, 1253, 1325
AluBI AGCT 7 cut(s) 149, 163, 301, 794, 1226, 1247, 1328
AluI AGCT 7 cut(s) 149, 163, 301, 794, 1226, 1247, 1328
AlwI GGATC 4 cut(s) 513, 654, 896, 924
AlwNI CAGNNNCTG 1 cut(s) 1535
AoxI GGCC 3 cut(s) 112, 1378, 1532
ApeKI GCWGC 3 cut(s) 55, 772, 1259
ApoI RAATTY 4 cut(s) 201, 404, 605, 1372
Asp700I GAANNNNTTC 1 cut(s) 1572
Asp718I GGTACC 1 cut(s) 1351
AspLEI GCGC 3 cut(s) 55, 1308, 1310
AspS9I GGNCC 4 cut(s) 113, 234, 1142, 1532
AsuHPI GGTGA 1 cut(s) 1088
AvaII GGWCC 2 cut(s) 234, 1142
AxyI CCTNAGG 1 cut(s) 555
BaeGI GKGCMC 1 cut(s) 125
BanI GGYRCC 3 cut(s) 122, 269, 1351
BanII GRGCYC 1 cut(s) 438
BbvI GCAGC 3 cut(s) 42, 784, 1271
BccI CCATC 8 cut(s) 134, 167, 260, 353, 418, 916, 1181, 1474
BcgI CGANNNNNNTGC 1 cut(s) 29
BclI TGATCA 2 cut(s) 1134, 1423
BfaI CTAG 4 cut(s) 353, 657, 1274, 1316
BfoI RGCGCY 1 cut(s) 56
BglI GCCNNNNNGGC 1 cut(s) 120
BisI GCNGC 5 cut(s) 51, 56, 75, 773, 1260
BlsI GCNGC 5 cut(s) 52, 57, 76, 774, 1261
Bme18I GGWCC 2 cut(s) 234, 1142
BmgT120I GGNCC 4 cut(s) 113, 234, 1142, 1532
BmiI GGNNCC 6 cut(s) 115, 124, 271, 561, 1144, 1353
BmsI GCATC 6 cut(s) 327, 349, 670, 1165, 1327, 1553
BpmI CTGGAG 2 cut(s) 1263, 1479
BpuEI CTTGAG 3 cut(s) 83, 419, 967
BsaHI GRCGYC 1 cut(s) 802
BsaJI CCNNGG 5 cut(s) 78, 109, 117, 1039, 1072
Bsc4I CCNNNNNNNGG 4 cut(s) 913, 928, 1045, 1480
Bse1I ACTGG 1 cut(s) 1462
Bse21I CCTNAGG 1 cut(s) 555
Bse3DI GCAATG 4 cut(s) 436, 473, 715, 789
BseDI CCNNGG 5 cut(s) 78, 109, 117, 1039, 1072
BseGI GGATG 5 cut(s) 178, 340, 342, 661, 1180
BseLI CCNNNNNNNGG 4 cut(s) 913, 928, 1045, 1480
BseMI GCAATG 4 cut(s) 436, 473, 715, 789
BseMII CTCAG 6 cut(s) 546, 759, 1178, 1184, 1359, 1542
BseNI ACTGG 1 cut(s) 1462
BsePI GCGCGC 1 cut(s) 1306
BseRI GAGGAG 2 cut(s) 691, 976
BseSI GKGCMC 1 cut(s) 125
BseXI GCAGC 3 cut(s) 42, 784, 1271
BseYI CCCAGC 1 cut(s) 1580
BsgI GTGCAG 1 cut(s) 41
Bsh1236I CGCG 1 cut(s) 1308
BshFI GGCC 3 cut(s) 114, 1380, 1534
BshNI GGYRCC 3 cut(s) 122, 269, 1351
BslFI GGGAC 1 cut(s) 1455
BslI CCNNNNNNNGG 4 cut(s) 913, 928, 1045, 1480
BsmFI GGGAC 1 cut(s) 1455
BsmI GAATGC 2 cut(s) 31, 543
BsnI GGCC 3 cut(s) 114, 1380, 1534
Bsp1286I GDGCHC 2 cut(s) 125, 438
Bsp143I GATC 8 cut(s) 505, 568, 646, 901, 916, 1021, 1134, 1423
BspANI GGCC 3 cut(s) 114, 1380, 1534
BspCNI CTCAG 6 cut(s) 547, 758, 1177, 1185, 1360, 1541
BspFNI CGCG 1 cut(s) 1308
BspHI TCATGA 1 cut(s) 1030
BspLI GGNNCC 6 cut(s) 115, 124, 271, 561, 1144, 1353
BspPI GGATC 4 cut(s) 513, 654, 896, 924
BspQI GCTCTTC 1 cut(s) 946
BspT107I GGYRCC 3 cut(s) 122, 269, 1351
BsrDI GCAATG 4 cut(s) 436, 473, 715, 789
BsrI ACTGG 1 cut(s) 1462
BssECI CCNNGG 5 cut(s) 78, 109, 117, 1039, 1072
BssHII GCGCGC 1 cut(s) 1306
BssMI GATC 8 cut(s) 505, 568, 646, 901, 916, 1021, 1134, 1423
BssNAI GTATAC 2 cut(s) 1060, 1089
BssNI GRCGYC 1 cut(s) 802
BssT1I CCWWGG 4 cut(s) 78, 117, 1039, 1072
Bst1107I GTATAC 2 cut(s) 1060, 1089
Bst4CI ACNGT 5 cut(s) 283, 978, 1213, 1297, 1554
Bst6I CTCTTC 3 cut(s) 668, 946, 1074
BstACI GRCGYC 1 cut(s) 802
BstC8I GCNNGC 4 cut(s) 86, 151, 299, 1308
BstDEI CTNAG 7 cut(s) 555, 745, 1164, 1193, 1234, 1368, 1528
BstF5I GGATG 5 cut(s) 178, 340, 342, 661, 1180
BstFNI CGCG 1 cut(s) 1308
BstH2I RGCGCY 1 cut(s) 56
BstHHI GCGC 3 cut(s) 55, 1308, 1310
BstKTI GATC 8 cut(s) 508, 571, 649, 904, 919, 1024, 1137, 1426
BstMBI GATC 8 cut(s) 505, 568, 646, 901, 916, 1021, 1134, 1423
BstMWI GCNNNNNNNGC 5 cut(s) 120, 236, 267, 380, 1591
BstNSI RCATGY 3 cut(s) 598, 1070, 1594
BstSLI GKGCMC 1 cut(s) 125
BstUI CGCG 1 cut(s) 1308
BstV1I GCAGC 3 cut(s) 42, 784, 1271
BstX2I RGATCY 1 cut(s) 916
BstYI RGATCY 1 cut(s) 916
BstZ17I GTATAC 2 cut(s) 1060, 1089
Bsu36I CCTNAGG 1 cut(s) 555
BsuRI GGCC 3 cut(s) 114, 1380, 1534
BtsCI GGATG 5 cut(s) 178, 340, 342, 661, 1180
BtsIMutI CAGTG 1 cut(s) 1455
Cac8I GCNNGC 4 cut(s) 86, 151, 299, 1308
CaiI CAGNNNCTG 1 cut(s) 1535
CciI TCATGA 1 cut(s) 1030
CfoI GCGC 3 cut(s) 55, 1308, 1310
Cfr13I GGNCC 4 cut(s) 113, 234, 1142, 1532
CseI GACGC 1 cut(s) 791
Csp6I GTAC 1 cut(s) 1352
CviAII CATG 7 cut(s) 61, 595, 650, 1031, 1067, 1421, 1591
CviQI GTAC 1 cut(s) 1352
DdeI CTNAG 7 cut(s) 555, 745, 1164, 1193, 1234, 1368, 1528
DpnI GATC 8 cut(s) 507, 570, 648, 903, 918, 1023, 1136, 1425
DpnII GATC 8 cut(s) 505, 568, 646, 901, 916, 1021, 1134, 1423
Eam1104I CTCTTC 3 cut(s) 668, 946, 1074
EarI CTCTTC 3 cut(s) 668, 946, 1074
EciI GGCGGA 1 cut(s) 518
Eco130I CCWWGG 4 cut(s) 78, 117, 1039, 1072
Eco24I GRGCYC 1 cut(s) 438
Eco47I GGWCC 2 cut(s) 234, 1142
Eco57I CTGAAG 1 cut(s) 374
Eco81I CCTNAGG 1 cut(s) 555
EcoO109I RGGNCCY 2 cut(s) 1142, 1532
EcoRI GAATTC 1 cut(s) 1372
EcoT14I CCWWGG 4 cut(s) 78, 117, 1039, 1072
EcoT22I ATGCAT 1 cut(s) 342
EcoT38I GRGCYC 1 cut(s) 438
ErhI CCWWGG 4 cut(s) 78, 117, 1039, 1072
FaeI CATG 7 cut(s) 64, 598, 653, 1034, 1070, 1424, 1594
FaqI GGGAC 1 cut(s) 1455
FatI CATG 7 cut(s) 60, 594, 649, 1030, 1066, 1420, 1590
FauI CCCGC 1 cut(s) 989
FbaI TGATCA 2 cut(s) 1134, 1423
FblI GTMKAC 3 cut(s) 615, 1059, 1088
Fnu4HI GCNGC 5 cut(s) 51, 56, 75, 773, 1260
FokI GGATG 5 cut(s) 185, 327, 349, 648, 1187
FriOI GRGCYC 1 cut(s) 438
Fsp4HI GCNGC 5 cut(s) 51, 56, 75, 773, 1260
FspBI CTAG 4 cut(s) 353, 657, 1274, 1316
GlaI GCGC 3 cut(s) 54, 1307, 1309
GluI GCNGC 5 cut(s) 51, 56, 75, 773, 1260
GsaI CCCAGC 1 cut(s) 1584
GsuI CTGGAG 2 cut(s) 1263, 1479
HaeII RGCGCY 1 cut(s) 56
HaeIII GGCC 3 cut(s) 114, 1380, 1534
HgaI GACGC 1 cut(s) 791
HhaI GCGC 3 cut(s) 55, 1308, 1310
Hin1I GRCGYC 1 cut(s) 802
Hin1II CATG 7 cut(s) 64, 598, 653, 1034, 1070, 1424, 1594
Hin6I GCGC 3 cut(s) 53, 1306, 1308
HinP1I GCGC 3 cut(s) 53, 1306, 1308
HindIII AAGCTT 1 cut(s) 1326
HinfI GANTC 3 cut(s) 7, 19, 448
HphI GGTGA 1 cut(s) 1088
Hpy166II GTNNAC 7 cut(s) 551, 616, 742, 1009, 1060, 1089, 1279
Hpy188I TCNGA 7 cut(s) 24, 207, 316, 453, 891, 1167, 1194
Hpy188III TCNNGA 9 cut(s) 100, 398, 644, 665, 700, 914, 1031, 1132, 1184
Hpy8I GTNNAC 7 cut(s) 551, 616, 742, 1009, 1060, 1089, 1279
HpyAV CCTTC 2 cut(s) 326, 886
HpyCH4III ACNGT 5 cut(s) 283, 978, 1213, 1297, 1554
HpyCH4IV ACGT 2 cut(s) 93, 622
HpyF10VI GCNNNNNNNGC 5 cut(s) 120, 236, 267, 380, 1591
HpyF3I CTNAG 7 cut(s) 555, 745, 1164, 1193, 1234, 1368, 1528
HpySE526I ACGT 2 cut(s) 93, 622
Hsp92I GRCGYC 1 cut(s) 802
Hsp92II CATG 7 cut(s) 64, 598, 653, 1034, 1070, 1424, 1594
HspAI GCGC 3 cut(s) 53, 1306, 1308
KpnI GGTACC 1 cut(s) 1355
Ksp22I TGATCA 2 cut(s) 1134, 1423
Kzo9I GATC 8 cut(s) 505, 568, 646, 901, 916, 1021, 1134, 1423
LguI GCTCTTC 1 cut(s) 946
LmnI GCTCC 3 cut(s) 146, 769, 1244
Lsp1109I GCAGC 3 cut(s) 42, 784, 1271
LweI GCATC 6 cut(s) 327, 349, 670, 1165, 1327, 1553
MaeI CTAG 4 cut(s) 353, 657, 1274, 1316
MaeII ACGT 2 cut(s) 93, 622
MaeIII GTNAC 2 cut(s) 692, 1586
MalI GATC 8 cut(s) 507, 570, 648, 903, 918, 1023, 1136, 1425
MboI GATC 8 cut(s) 505, 568, 646, 901, 916, 1021, 1134, 1423
MboII GAAGA 5 cut(s) 685, 963, 1091, 1229, 1300
MfeI CAATTG 2 cut(s) 509, 1158
MflI RGATCY 1 cut(s) 916
MhlI GDGCHC 2 cut(s) 125, 438
Mph1103I ATGCAT 1 cut(s) 342
MroXI GAANNNNTTC 1 cut(s) 1572
MseI TTAA 7 cut(s) 159, 528, 822, 1170, 1203, 1299, 1606
MslI CAYNNNNRTG 2 cut(s) 131, 345
MspA1I CMGCKG 1 cut(s) 239
MunI CAATTG 2 cut(s) 509, 1158
Mva1269I GAATGC 2 cut(s) 31, 543
MvnI CGCG 1 cut(s) 1308
MwoI GCNNNNNNNGC 5 cut(s) 120, 236, 267, 380, 1591
NdeII GATC 8 cut(s) 505, 568, 646, 901, 916, 1021, 1134, 1423
NlaIII CATG 7 cut(s) 64, 598, 653, 1034, 1070, 1424, 1594
NlaIV GGNNCC 6 cut(s) 115, 124, 271, 561, 1144, 1353
NmeAIII GCCGAG 1 cut(s) 90
NsiI ATGCAT 1 cut(s) 342
NspI RCATGY 3 cut(s) 598, 1070, 1594
PagI TCATGA 1 cut(s) 1030
PauI GCGCGC 1 cut(s) 1306
PciSI GCTCTTC 1 cut(s) 946
PcsI WCGNNNNNNNCGW 1 cut(s) 1582
PctI GAATGC 2 cut(s) 31, 543
PdmI GAANNNNTTC 1 cut(s) 1572
PfeI GAWTC 3 cut(s) 7, 19, 448
PkrI GCNGC 5 cut(s) 52, 57, 76, 774, 1261
PpuMI RGGWCCY 1 cut(s) 1142
PsiI TTATAA 1 cut(s) 1523
Psp5II RGGWCCY 1 cut(s) 1142
PspFI CCCAGC 1 cut(s) 1580
PspN4I GGNNCC 6 cut(s) 115, 124, 271, 561, 1144, 1353
PspPI GGNCC 4 cut(s) 113, 234, 1142, 1532
PspPPI RGGWCCY 1 cut(s) 1142
PstNI CAGNNNCTG 1 cut(s) 1535
PsuI RGATCY 1 cut(s) 916
PteI GCGCGC 1 cut(s) 1306
RsaI GTAC 1 cut(s) 1353
RsaNI GTAC 1 cut(s) 1352
RseI CAYNNNNRTG 2 cut(s) 131, 345
SapI GCTCTTC 1 cut(s) 946
SaqAI TTAA 7 cut(s) 159, 528, 822, 1170, 1203, 1299, 1606
SatI GCNGC 5 cut(s) 51, 56, 75, 773, 1260
Sau3AI GATC 8 cut(s) 505, 568, 646, 901, 916, 1021, 1134, 1423
Sau96I GGNCC 4 cut(s) 113, 234, 1142, 1532
SduI GDGCHC 2 cut(s) 125, 438
SfaNI GCATC 6 cut(s) 327, 349, 670, 1165, 1327, 1553
SinI GGWCC 2 cut(s) 234, 1142
SmiMI CAYNNNNRTG 2 cut(s) 131, 345
SmlI CTYRAG 3 cut(s) 98, 398, 946
SmoI CTYRAG 3 cut(s) 98, 398, 946
SspMI CTAG 4 cut(s) 353, 657, 1274, 1316
StyI CCWWGG 4 cut(s) 78, 117, 1039, 1072
TaaI ACNGT 5 cut(s) 283, 978, 1213, 1297, 1554
TaiI ACGT 2 cut(s) 96, 625
TaqI TCGA 4 cut(s) 5, 10, 1383, 1563
TaqII GACCGA 1 cut(s) 530
TauI GCSGC 2 cut(s) 53, 77
TfiI GAWTC 3 cut(s) 7, 19, 448
Tru1I TTAA 7 cut(s) 159, 528, 822, 1170, 1203, 1299, 1606
Tru9I TTAA 7 cut(s) 159, 528, 822, 1170, 1203, 1299, 1606
TscAI CASTG 1 cut(s) 1462
TseI GCWGC 3 cut(s) 55, 772, 1259
TspDTI ATGAA 9 cut(s) 77, 280, 320, 345, 507, 686, 828, 1236, 1581
TspGWI ACGGA 1 cut(s) 1003
TspRI CASTG 1 cut(s) 1462
VpaK11BI GGWCC 2 cut(s) 234, 1142
XapI RAATTY 4 cut(s) 201, 404, 605, 1372
XceI RCATGY 3 cut(s) 598, 1070, 1594
XmiI GTMKAC 3 cut(s) 615, 1059, 1088
XmnI GAANNNNTTC 1 cut(s) 1572
XspI CTAG 4 cut(s) 353, 657, 1274, 1316
Zsp2I ATGCAT 1 cut(s) 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.