Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002106.1

Orthogroup ID

OG0003345

Physical Location & Seq

Genomic Coordinates Reverse (-)

78947 .. 83521

Gene Structure 4575 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002106.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

atgtctgtgcgagtgctgaaccctaatgcggaggtgctgaacaagtcggcggccctgcacatgaacatcaacgccgccaagggcttgcaggatgtcctcaaaaccaacctcggccccaaaggcaccatcaaaatgctcgttggtggctctggagacatcaagctcactaaagatggcaacactctcctcaaagaaatgcagattcaaaaccccacagcaattatgattgccaggacagctgttgcccaagatgacattagcggagacggcaccacctctactgtcctattcattggcgagcttatgaaacaatccgaacgatacattgatgaagggatgcatccacgtgtcctggttgatggttttgagattgccaaaagagcaactcttcaatttatcgagaaatttaaaaccactgtggtgatgggcagtgagcctgacaaagaaatcctaaaaatggtagcaaggacaaccgtgcgaacaaagttacatgaagcattggctgatcaattgactgacatagttgtaaatgcggttctttgcatccgcaaacctgaggaggcaattgatctgtttatggtggagattatgcacatgcgccataaatttgatgcagatacacgtttggttgagggtcttgtccttgatcatggttctaggcatcctgatatgaagcgacgagcagagaattgttacatcttgacagccaatgtatctctggagtacgagaaaagtgaagtgaactctggatttttctattcaaatgcggagcagagagaagcaatggttttagctgaaagacgtcaggttgacgagagagttagaaagattattgagctgaaaaataaggtttgttctggtaatgacaagaattttgtcgttatcaatcagaagggaattgatcccccatctctggaccttctggcaagggcagggattattgctctgagaagagcaaagaggagaaatatggaacggttggttttggcttgtggaggggaggcagtgaactctatagatgatttaactcctgattgccttggctgggctggacttgtatacgagcacgtccttggtgaagagaagtacacatttgttgaaaatgtgaagaaccctcattcttgcacaatcttaatcaaagggcctaatgaccatacaattgcccagattaaggatgctgttcgtgatggtctgagggcagtgaaaaatacaatagaagatgaagctgtaatcttgggtgctggagcttttgaagttgcagccagacaatatctcataaatgaagtgaagaaaactgttcaagggcgagctcaactcggtgttgaagcttttgctgatgctctccttgtggtgcccaagacacttgctgagaatgctggcctcgacacacaagatgtgataatttctctcaagggagagcatgagcggggaaacgttgtcggactaaatcatcacactggggaacccattgacccacagatggaggggatcttcgacaactactctgtgaagcggcagattataaactcagggcctgtaattacatctcaattgttgttggtggatgaagtgatccgtgctgggcgcaacatgaggaagccaacttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0006457 GO:0006458 GO:0008150 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0016020 GO:0032991 GO:0042221 GO:0044183 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0046686 GO:0050896 GO:0051082 GO:0061077 GO:0101031

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

535

Amino Acids

59.18

Weight (kDa)

6.39

Isoelectric Point (pI)

31.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003345)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02530 AT5G16070
fragaria_vesca	FvH4_1g11210
malus_domestica	MD09G1086000.v1.1 MD17G1104900.v1.1
prunus_persica	Prupe.3G238800_v2.0.a1
pyrus_communis	pycom09g01130 pycom17g07580
rosa_chinensis	RchiOBHm_Chr2g0098621 RchiOBHm_Chr2g0138531 RchiOBHm_Chr4g0407281 RchiOBHm_Chr4g0409191 RchiOBHm_Chr6g0270681
rosa_laevigata	RLG00000013776 RLG00000016815
rosa_multiflora	Rmu_co8186612.1_g000001 Rmu_sc0000474.1_g000003 Rmu_sc0002106.1_g000012 Rmu_sc0002776.1_g000012
rosa_roxburghii	Rroxscaffold_2G00143840 Rroxscaffold_7G00197690
rosa_rugosa	Rorug02G0073800 Rorug06G0055700
rosa_samantha	Rh2AG121400 Rh2BG125000 Rh2CG126000 Rh2DG127100 Rh5BG537700 Rh6AG175000 Rh6AG275700 Rh6CG174300 Rh6DG166700 Rh7CG256600
rosa_wichuraiana	Rw0G004140 Rw0G012590 Rw6G014910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1523
AatII	GACGTC	1 cut(s)	805
AccB1I	GGYRCC	3 cut(s)	122, 269, 1351
AccBSI	CCGCTC	1 cut(s)	1426
AccI	GTMKAC	1 cut(s)	1059
AciI	CCGC	9 cut(s)	29, 50, 75, 261, 533, 547, 767, 1426, 1513
AclI	AACGTT	1 cut(s)	1434
AclWI	GGATC	3 cut(s)	896, 1496, 1567
AcsI	RAATTY	3 cut(s)	404, 605, 871
AcvI	CACGTG	1 cut(s)	347
AcyI	GRCGYC	1 cut(s)	802
AfaI	GTAC	2 cut(s)	725, 1088
AfiI	CCNNNNNNNGG	6 cut(s)	28, 457, 913, 1045, 1171, 1480
AflIII	ACRYGT	2 cut(s)	346, 620
AgsI	TTSAA	7 cut(s)	206, 392, 762, 1100, 1253, 1301, 1325
AjiI	CACGTC	1 cut(s)	1069
AjnI	CCWGG	2 cut(s)	230, 351
AleI	CACNNNNGTG	1 cut(s)	419
AluBI	AGCT	9 cut(s)	163, 239, 301, 794, 838, 1226, 1247, 1310, 1328
AluI	AGCT	9 cut(s)	163, 239, 301, 794, 838, 1226, 1247, 1310, 1328
Alw21I	GWGCWC	2 cut(s)	1068, 1312
Alw26I	GTCTC	2 cut(s)	147, 258
AlwI	GGATC	3 cut(s)	896, 1496, 1567
AlwNI	CAGNNNCTG	1 cut(s)	1535
AoxI	GGCC	5 cut(s)	51, 112, 1142, 1378, 1532
ApeKI	GCWGC	1 cut(s)	1259
ApoI	RAATTY	3 cut(s)	404, 605, 871
ArsI	GACNNNNNNTTYG	2 cut(s)	857, 889
AspLEI	GCGC	2 cut(s)	600, 1587
AspS9I	GGNCC	5 cut(s)	52, 113, 916, 1142, 1532
AsuHPI	GGTGA	2 cut(s)	433, 1088
AvaII	GGWCC	1 cut(s)	916
AxyI	CCTNAGG	1 cut(s)	555
BaeGI	GKGCMC	1 cut(s)	1356
BanI	GGYRCC	3 cut(s)	122, 269, 1351
BanII	GRGCYC	1 cut(s)	1312
BbrPI	CACGTG	1 cut(s)	347
Bbv12I	GWGCWC	2 cut(s)	1068, 1312
BbvI	GCAGC	1 cut(s)	1271
BccI	CCATC	7 cut(s)	134, 167, 353, 418, 916, 1181, 1474
BceAI	ACGGC	1 cut(s)	283
BciT130I	CCWGG	2 cut(s)	232, 353
BclI	TGATCA	2 cut(s)	505, 646
BcoDI	GTCTC	2 cut(s)	147, 258
BfaI	CTAG	1 cut(s)	657
BfmI	CTRYAG	1 cut(s)	1014
BglI	GCCNNNNNGGC	1 cut(s)	120
BisI	GCNGC	4 cut(s)	51, 75, 1260, 1514
BlsI	GCNGC	4 cut(s)	52, 76, 1261, 1515
Bme1390I	CCNGG	2 cut(s)	232, 353
Bme18I	GGWCC	1 cut(s)	916
BmgBI	CACGTC	1 cut(s)	1069
BmgT120I	GGNCC	5 cut(s)	52, 113, 916, 1142, 1532
BmiI	GGNNCC	5 cut(s)	115, 124, 271, 1353, 1464
BmrFI	CCNGG	2 cut(s)	232, 353
BmrI	ACTGGG	1 cut(s)	1467
BmsI	GCATC	7 cut(s)	327, 349, 552, 601, 670, 1165, 1327
BmuI	ACTGGG	1 cut(s)	1467
BplI	GAGNNNNNCTC	2 cut(s)	1299, 1331
BpmI	CTGGAG	3 cut(s)	171, 740, 1263
BpuEI	CTTGAG	1 cut(s)	1394
BsaAI	YACGTR	1 cut(s)	347
BsaHI	GRCGYC	1 cut(s)	802
BsaJI	CCNNGG	4 cut(s)	78, 109, 1039, 1072
Bsc4I	CCNNNNNNNGG	6 cut(s)	28, 457, 913, 1045, 1171, 1480
Bse1I	ACTGG	1 cut(s)	1462
Bse21I	CCTNAGG	1 cut(s)	555
Bse3DI	GCAATG	1 cut(s)	789
BseBI	CCWGG	2 cut(s)	232, 353
BseDI	CCNNGG	4 cut(s)	78, 109, 1039, 1072
BseGI	GGATG	7 cut(s)	97, 340, 342, 543, 661, 1180, 1570
BseLI	CCNNNNNNNGG	6 cut(s)	28, 457, 913, 1045, 1171, 1480
BseMI	GCAATG	1 cut(s)	789
BseMII	CTCAG	5 cut(s)	546, 938, 1184, 1359, 1542
BseNI	ACTGG	1 cut(s)	1462
BseRI	GAGGAG	3 cut(s)	176, 572, 976
BseSI	GKGCMC	1 cut(s)	1356
BseXI	GCAGC	1 cut(s)	1271
BseYI	CCCAGC	2 cut(s)	1044, 1580
BsgI	GTGCAG	1 cut(s)	41
BshFI	GGCC	5 cut(s)	53, 114, 1144, 1380, 1534
BshNI	GGYRCC	3 cut(s)	122, 269, 1351
BsiHKAI	GWGCWC	2 cut(s)	1068, 1312
BslI	CCNNNNNNNGG	6 cut(s)	28, 457, 913, 1045, 1171, 1480
BsmAI	GTCTC	2 cut(s)	147, 258
BsmBI	CGTCTC	1 cut(s)	258
BsmI	GAATGC	1 cut(s)	1378
BsnI	GGCC	5 cut(s)	53, 114, 1144, 1380, 1534
Bsp1286I	GDGCHC	3 cut(s)	1068, 1312, 1356
Bsp143I	GATC	6 cut(s)	505, 568, 646, 901, 1488, 1572
BspACI	CCGC	9 cut(s)	29, 50, 75, 261, 533, 547, 767, 1426, 1513
BspANI	GGCC	5 cut(s)	53, 114, 1144, 1380, 1534
BspCNI	CTCAG	5 cut(s)	547, 939, 1185, 1360, 1541
BspLI	GGNNCC	5 cut(s)	115, 124, 271, 1353, 1464
BspPI	GGATC	3 cut(s)	896, 1496, 1567
BspQI	GCTCTTC	1 cut(s)	946
BspT107I	GGYRCC	3 cut(s)	122, 269, 1351
BsrBI	CCGCTC	1 cut(s)	1426
BsrDI	GCAATG	1 cut(s)	789
BsrI	ACTGG	1 cut(s)	1462
BssECI	CCNNGG	4 cut(s)	78, 109, 1039, 1072
BssMI	GATC	6 cut(s)	505, 568, 646, 901, 1488, 1572
BssNAI	GTATAC	1 cut(s)	1060
BssNI	GRCGYC	1 cut(s)	802
BssT1I	CCWWGG	3 cut(s)	78, 1039, 1072
Bst1107I	GTATAC	1 cut(s)	1060
Bst2UI	CCWGG	2 cut(s)	232, 353
Bst4CI	ACNGT	5 cut(s)	283, 418, 475, 978, 1297
Bst6I	CTCTTC	3 cut(s)	393, 946, 1074
BstACI	GRCGYC	1 cut(s)	802
BstBAI	YACGTR	1 cut(s)	347
BstC8I	GCNNGC	4 cut(s)	86, 299, 1308, 1378
BstDEI	CTNAG	6 cut(s)	555, 947, 1193, 1368, 1528, 1605
BstF5I	GGATG	7 cut(s)	97, 340, 342, 543, 661, 1180, 1570
BstHHI	GCGC	2 cut(s)	600, 1587
BstKTI	GATC	6 cut(s)	508, 571, 649, 904, 1491, 1575
BstMAI	GTCTC	2 cut(s)	147, 258
BstMBI	GATC	6 cut(s)	505, 568, 646, 901, 1488, 1572
BstMWI	GCNNNNNNNGC	5 cut(s)	120, 236, 267, 380, 1373
BstNI	CCWGG	2 cut(s)	232, 353
BstNSI	RCATGY	1 cut(s)	598
BstSCI	CCNGG	2 cut(s)	230, 351
BstSFI	CTRYAG	1 cut(s)	1014
BstSLI	GKGCMC	1 cut(s)	1356
BstV1I	GCAGC	1 cut(s)	1271
BstX2I	RGATCY	1 cut(s)	1488
BstYI	RGATCY	1 cut(s)	1488
BstZ17I	GTATAC	1 cut(s)	1060
Bsu36I	CCTNAGG	1 cut(s)	555
BsuRI	GGCC	5 cut(s)	53, 114, 1144, 1380, 1534
BtrI	CACGTC	1 cut(s)	1069
BtsCI	GGATG	7 cut(s)	97, 340, 342, 543, 661, 1180, 1570
BtsI	GCAGTG	3 cut(s)	436, 1011, 1206
BtsIMutI	CAGTG	5 cut(s)	414, 436, 1011, 1206, 1455
Cac8I	GCNNGC	4 cut(s)	86, 299, 1308, 1378
CaiI	CAGNNNCTG	1 cut(s)	1535
CfoI	GCGC	2 cut(s)	600, 1587
Cfr13I	GGNCC	5 cut(s)	52, 113, 916, 1142, 1532
Csp6I	GTAC	2 cut(s)	724, 1087
CviAII	CATG	6 cut(s)	61, 491, 595, 650, 1421, 1591
CviQI	GTAC	2 cut(s)	724, 1087
DdeI	CTNAG	6 cut(s)	555, 947, 1193, 1368, 1528, 1605
DpnI	GATC	6 cut(s)	507, 570, 648, 903, 1490, 1574
DpnII	GATC	6 cut(s)	505, 568, 646, 901, 1488, 1572
DraI	TTTAAA	1 cut(s)	409
Eam1104I	CTCTTC	3 cut(s)	393, 946, 1074
EarI	CTCTTC	3 cut(s)	393, 946, 1074
Ecl136II	GAGCTC	1 cut(s)	1310
Eco130I	CCWWGG	3 cut(s)	78, 1039, 1072
Eco24I	GRGCYC	1 cut(s)	1312
Eco47I	GGWCC	1 cut(s)	916
Eco53kI	GAGCTC	1 cut(s)	1310
Eco72I	CACGTG	1 cut(s)	347
Eco81I	CCTNAGG	1 cut(s)	555
EcoICRI	GAGCTC	1 cut(s)	1310
EcoO109I	RGGNCCY	2 cut(s)	1142, 1532
EcoRII	CCWGG	2 cut(s)	230, 351
EcoT14I	CCWWGG	3 cut(s)	78, 1039, 1072
EcoT22I	ATGCAT	1 cut(s)	342
EcoT38I	GRGCYC	1 cut(s)	1312
ErhI	CCWWGG	3 cut(s)	78, 1039, 1072
Esp3I	CGTCTC	1 cut(s)	258
FaeI	CATG	6 cut(s)	64, 494, 598, 653, 1424, 1594
FatI	CATG	6 cut(s)	60, 490, 594, 649, 1420, 1590
FauI	CCCGC	1 cut(s)	1419
FbaI	TGATCA	2 cut(s)	505, 646
FblI	GTMKAC	1 cut(s)	1059
Fnu4HI	GCNGC	4 cut(s)	51, 75, 1260, 1514
FokI	GGATG	7 cut(s)	104, 327, 349, 530, 648, 1187, 1577
FriOI	GRGCYC	1 cut(s)	1312
Fsp4HI	GCNGC	4 cut(s)	51, 75, 1260, 1514
FspBI	CTAG	1 cut(s)	657
GlaI	GCGC	2 cut(s)	599, 1586
GluI	GCNGC	4 cut(s)	51, 75, 1260, 1514
GsaI	CCCAGC	2 cut(s)	1048, 1584
GsuI	CTGGAG	3 cut(s)	171, 740, 1263
HaeIII	GGCC	5 cut(s)	53, 114, 1144, 1380, 1534
HhaI	GCGC	2 cut(s)	600, 1587
Hin1I	GRCGYC	1 cut(s)	802
Hin1II	CATG	6 cut(s)	64, 494, 598, 653, 1424, 1594
Hin6I	GCGC	2 cut(s)	598, 1585
HinP1I	GCGC	2 cut(s)	598, 1585
HincII	GTYRAC	1 cut(s)	811
HindII	GTYRAC	1 cut(s)	811
HindIII	AAGCTT	1 cut(s)	1326
HinfI	GANTC	1 cut(s)	202
HphI	GGTGA	2 cut(s)	433, 1088
Hpy166II	GTNNAC	5 cut(s)	742, 811, 1009, 1060, 1089
Hpy188I	TCNGA	5 cut(s)	316, 891, 948, 1194, 1442
Hpy188III	TCNNGA	9 cut(s)	150, 400, 665, 700, 719, 747, 914, 1031, 1184
Hpy8I	GTNNAC	5 cut(s)	742, 811, 1009, 1060, 1089
Hpy99I	CGWCG	1 cut(s)	681
HpyAV	CCTTC	3 cut(s)	326, 886, 929
HpyCH4III	ACNGT	5 cut(s)	283, 418, 475, 978, 1297
HpyCH4IV	ACGT	5 cut(s)	346, 622, 802, 1068, 1434
HpyCH4V	TGCA	9 cut(s)	58, 88, 199, 340, 543, 592, 614, 1125, 1259
HpyF10VI	GCNNNNNNNGC	5 cut(s)	120, 236, 267, 380, 1373
HpyF3I	CTNAG	6 cut(s)	555, 947, 1193, 1368, 1528, 1605
HpySE526I	ACGT	5 cut(s)	346, 622, 802, 1068, 1434
Hsp92I	GRCGYC	1 cut(s)	802
Hsp92II	CATG	6 cut(s)	64, 494, 598, 653, 1424, 1594
HspAI	GCGC	2 cut(s)	598, 1585
Ksp22I	TGATCA	2 cut(s)	505, 646
Kzo9I	GATC	6 cut(s)	505, 568, 646, 901, 1488, 1572
LguI	GCTCTTC	1 cut(s)	946
LmnI	GCTCC	2 cut(s)	769, 1244
Lsp1109I	GCAGC	1 cut(s)	1271
LweI	GCATC	7 cut(s)	327, 349, 552, 601, 670, 1165, 1327
MaeI	CTAG	1 cut(s)	657
MaeII	ACGT	5 cut(s)	346, 622, 802, 1068, 1434
MaeIII	GTNAC	2 cut(s)	486, 692
MalI	GATC	6 cut(s)	507, 570, 648, 903, 1490, 1574
MbiI	CCGCTC	1 cut(s)	1426
MboI	GATC	6 cut(s)	505, 568, 646, 901, 1488, 1572
MboII	GAAGA	7 cut(s)	380, 963, 1091, 1120, 1229, 1300, 1483
MfeI	CAATTG	4 cut(s)	509, 564, 1158, 1550
MflI	RGATCY	1 cut(s)	1488
MhlI	GDGCHC	3 cut(s)	1068, 1312, 1356
MmeI	TCCRAC	1 cut(s)	1420
Mph1103I	ATGCAT	1 cut(s)	342
MseI	TTAA	4 cut(s)	408, 1025, 1133, 1170
MslI	CAYNNNNRTG	3 cut(s)	131, 345, 419
MspA1I	CMGCKG	1 cut(s)	239
MspR9I	CCNGG	2 cut(s)	232, 353
MunI	CAATTG	4 cut(s)	509, 564, 1158, 1550
Mva1269I	GAATGC	1 cut(s)	1378
MvaI	CCWGG	2 cut(s)	232, 353
MwoI	GCNNNNNNNGC	5 cut(s)	120, 236, 267, 380, 1373
NdeII	GATC	6 cut(s)	505, 568, 646, 901, 1488, 1572
NlaIII	CATG	6 cut(s)	64, 494, 598, 653, 1424, 1594
NlaIV	GGNNCC	5 cut(s)	115, 124, 271, 1353, 1464
NmeAIII	GCCGAG	1 cut(s)	90
NsiI	ATGCAT	1 cut(s)	342
NspI	RCATGY	1 cut(s)	598
OliI	CACNNNNGTG	1 cut(s)	419
PciSI	GCTCTTC	1 cut(s)	946
PctI	GAATGC	1 cut(s)	1378
PfeI	GAWTC	1 cut(s)	202
PkrI	GCNGC	4 cut(s)	52, 76, 1261, 1515
PmaCI	CACGTG	1 cut(s)	347
PmlI	CACGTG	1 cut(s)	347
Ppu21I	YACGTR	1 cut(s)	347
PsiI	TTATAA	1 cut(s)	1523
Psp124BI	GAGCTC	1 cut(s)	1312
Psp1406I	AACGTT	1 cut(s)	1434
Psp6I	CCWGG	2 cut(s)	230, 351
PspCI	CACGTG	1 cut(s)	347
PspFI	CCCAGC	2 cut(s)	1044, 1580
PspGI	CCWGG	2 cut(s)	230, 351
PspN4I	GGNNCC	5 cut(s)	115, 124, 271, 1353, 1464
PspPI	GGNCC	5 cut(s)	52, 113, 916, 1142, 1532
PsrI	GAACNNNNNNTAC	2 cut(s)	519, 551
PstNI	CAGNNNCTG	1 cut(s)	1535
PsuI	RGATCY	1 cut(s)	1488
PvuII	CAGCTG	1 cut(s)	239
RsaI	GTAC	2 cut(s)	725, 1088
RsaNI	GTAC	2 cut(s)	724, 1087
RseI	CAYNNNNRTG	3 cut(s)	131, 345, 419
SacI	GAGCTC	1 cut(s)	1312
SapI	GCTCTTC	1 cut(s)	946
SaqAI	TTAA	4 cut(s)	408, 1025, 1133, 1170
SatI	GCNGC	4 cut(s)	51, 75, 1260, 1514
Sau3AI	GATC	6 cut(s)	505, 568, 646, 901, 1488, 1572
Sau96I	GGNCC	5 cut(s)	52, 113, 916, 1142, 1532
ScrFI	CCNGG	2 cut(s)	232, 353
SduI	GDGCHC	3 cut(s)	1068, 1312, 1356
SfaNI	GCATC	7 cut(s)	327, 349, 552, 601, 670, 1165, 1327
SfcI	CTRYAG	1 cut(s)	1014
SinI	GGWCC	1 cut(s)	916
SmiMI	CAYNNNNRTG	3 cut(s)	131, 345, 419
SmlI	CTYRAG	1 cut(s)	1409
SmoI	CTYRAG	1 cut(s)	1409
SsiI	CCGC	9 cut(s)	29, 50, 75, 261, 533, 547, 767, 1426, 1513
SspMI	CTAG	1 cut(s)	657
SstI	GAGCTC	1 cut(s)	1312
StyD4I	CCNGG	2 cut(s)	230, 351
StyI	CCWWGG	3 cut(s)	78, 1039, 1072
TaaI	ACNGT	5 cut(s)	283, 418, 475, 978, 1297
TaiI	ACGT	5 cut(s)	349, 625, 805, 1071, 1437
TaqI	TCGA	3 cut(s)	399, 1383, 1494
TatI	WGTACW	1 cut(s)	1086
TauI	GCSGC	3 cut(s)	53, 77, 1516
TfiI	GAWTC	1 cut(s)	202
Tru1I	TTAA	4 cut(s)	408, 1025, 1133, 1170
Tru9I	TTAA	4 cut(s)	408, 1025, 1133, 1170
TscAI	CASTG	5 cut(s)	421, 436, 1011, 1206, 1462
TseI	GCWGC	1 cut(s)	1259
TspDTI	ATGAA	9 cut(s)	77, 280, 320, 345, 507, 686, 1236, 1296, 1581
TspGWI	ACGGA	1 cut(s)	1565
TspRI	CASTG	5 cut(s)	421, 436, 1011, 1206, 1462
VpaK11BI	GGWCC	1 cut(s)	916
XapI	RAATTY	3 cut(s)	404, 605, 871
XceI	RCATGY	1 cut(s)	598
XcmI	CCANNNNNNNNNTGG	2 cut(s)	421, 715
XmiI	GTMKAC	1 cut(s)	1059
XspI	CTAG	1 cut(s)	657
ZraI	GACGTC	1 cut(s)	803
Zsp2I	ATGCAT	1 cut(s)	342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.