Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0008877

Physical Location & Seq

Genomic Coordinates Reverse (-)

8094426 .. 8098265

Gene Structure 3840 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3003 bp

ATGACCTCCGGGCGGTACAAAGTACGCCTCTTCCGTAGAGGCAGGAAAACCATACGTCTGCGCAAAGCCTCTAGTTATGAACCTTTAGCAACAGCATCAACGGCACCTGATGCTGCCTCTGACCATGTGATTAACATCCCTCCCCAGGAAAGGAATTCGAACGAAGTTGCCAGAATTGTGAGGGAGAAGGACTTGAACTCATTCCACGGACTTGGTGGTGTTGACGGCATCTTGCCACTTCTCAGGTCTCCATTTGAGGATGGTGCCGTTGATGGTGGTCAAAATCCGCAAGGATGGAACGTTACCAAGTCCCCAGTTGATGCAAAAGGTTTCTTGTACTTTTTGTTTGAGGCGTGCAATCAGTACACAATTTTTTTCCTCTTGCTCTCAGCTGGGCTTTCATTCGCCATTGAATTCATTCGCCAAGGAGTCAAGTACGGCTGGCATGACGGTGTTGGCATACTAATTGCGGCGCTCTTACTTATTGCTTTCCCTTCTGTGGGGAAATACCGCTATCAGAGAAAGCTGGCGCGGAAGCACTTGCGGTATAGGAGCAGACTGATGGTGAATGTTGAACGAAGTAGCACAGAAACTACACCAATTACCATATCTGATGTTGTGGTGGGTGATATAGTTCATTTGCAGGAAGGAGACCGTGTTCCTGCTGACGGTTTGTTCATAGATCATGGTGAGGAACTGGTGCTGGATGAGGTTTTGAGACCGAAAATTGATTGTGAAAATAATCCATTTGTTTTTTCGGGTTCAATTGTTGTGAAGGGTCGCGGCCGCATGATTGTTACATCCATTAGTGCTAATACAGCTTTTGCTGAGGTGCTGAGCTTGGTGGCTGATCATAATCCAAAGGAGAAGACACTGCTACAAGCTTTGATGGACAAACCGAATGCTTGTATGGATTATCTTGCATGTTGTGTCTCGATACTGATTGCGATTGTGATGTTGATACGCCTACTAGTCTTAAGGAAGCACGAAAACTACAATGGGGGGCCAGAGCTGAAAGGGAAAGTTTCAATGAATCTTGTGATGAGGACCATTGAGAAGATCTTCTTGAAACCTCAAGGAAAGGTTTCCATCTTAGCAAGTGTTCTCGCAACCGCGGTAATAGGGATACAACATGGGATGCCTTTTGTGATTGCAGTTGCCCTTTTTCAATGGAGCAATAAAGCGGCCAAAAATCAGGCAGTACCACAGAATCTATCAGCTTGTGTCACCATGGGACTCATAAATGTCATCTGCATCGAAACAACTGCAGAGCTAATGTGCAACCCGACGGAGGTCAAGGAAGTTTGGATCGGTGAAGAGGATTTAAGCATTGGTGAAGTGAATTCGGAAACTGACCAAGTTCTTGAGGCACTGCATCAGGGGATTTCAGCTACCGCATCACCAACAAATGATCTGCTCATTTCTTGGCTGAACACCAGATGGGGTAGTAAAGCGGCGTTACCGGATCGAAGTTTTGAAACCGTCGAAGAGAGACAATTGAGCTCTGACGAAAAATGTAGAGGGATCTTGGTGAGGAAAATCGAGAATGATGAGCAGATTATGCAAATTCACTGCGACGGAGATGCATCAACAATATTAGGCATGTGTTCACATTACTATGATAACAGAGGGGAATGTCACAATATCGGAAACCAGAAGAGAAAACTTGAGCAGGTGATCAAGAAGATGGAGAAGGATGGTCGGAGACCGATTGCATACGCGTACAAGAAAACACAAGCTGAAGAACTTACAGGAGATGGGCTGATTTTGTTGGCACTAGTCGGTCTTAGATGTCCATATCAAGAAGAGCTTAAACTGGCGGTGAAAGCTCTTAGAGAAGCTGGAGTAAGCATCAAACTGGTGTCAGAGGATGAGCTCTCGATAGTGAGAGCTACAGCTTCGGAACTTGGGATCTCCCCTGCCTCAGATGACAAGGTAATTGAAGGTCAAGCTTTCCGAAGGCTCAATTCCATGGAAAGGCCGGATGCGGTGGATTTGATCTCTGTGATGGGAAGTTCCCTCCCCAAGGACAAGTTTCTCATGGTGGACGAGCTAAAGAAAAAAGGTCGCATAGTTGCATTCTACGGAGGTCTGACCATACGCGACACTCTGACCTTAAAAGAAGCTGATGTAGGAATCGTGCACGATATCTGGAGAACCGGGATGGCCAGAGAGAATGCCGATCTTATAATCGGCAACGGCTGTTTCTTAGGCAAGATTGTCAACTCTGGTGCTTGTGCCTACCACAACATTCAGCACTTCTCTCAACTTCAGCTCACGGCTTGCATATCCGGTTTACTTGTAACCCTAGTCGCCACAATGCATTCGGGAGAGTCCCCGCTAACAGCAGTTCATTTGATTTGGGTGAACTTGATCATGTGCCTTCTTGGTGGCCTCATGATGGTGATGGAGTTACAAGGCACCTTACAACACATTCAAAGACCTGAGGGGAGGACCGAGTCGCTTATAACCAAGGTCATCTGGAGAAACATAGCAGTTCAAGTTTTGTATCAGGTTTCCGTCTTGCTGATCTTACATTTCATGCCGAGCGTGAATGAAGGCGTCCGGAATACCATGATTTTCAGTACTTTCACCTTATGCCAGGTCCTTAATCTGTTCAGTGCCATGGACTTGGTGAAAAAGGAAGTGCTGGTTGTAGTCCTCCACAGCCATTGGTTTCTGATGGCGTTGGGGGCTGTTTTGACAATGCAGGTCATCGTTGTCGAGTTCGGAAAAGGACTAGCTAGCTGTGTGAAGTTGAATGCACTGCAGTGGCTAATCTGTTTCACTCTGGCTGCTCTTTCGTGGGGCTCTGATCGGGCCATCAAATTCATTTCAGCTCACCTACAAAGAGCAACTTCGGCACTGAGGGTGAGCTCACACGTTGGATTCTCACATCGCCACCGCAGATTATACATTCTTATTTGGTTGTTCCTCATCTTCTCTGTATCATCATACTGTTTCCACCCAGAAAATTCTCGACTCTCTATGCATATCCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase

Protein Analysis

1001

Amino Acids

111.03

Weight (kDa)

8.49

Isoelectric Point (pI)

38.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	189 - 282	2.1e-11	P-type ATPase actuator domain
Cation_ATPase	PF13246	489 - 602	8e-08	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	779 - 945	2.6e-23	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008877)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g40950 FvH4_6g40950
malus_domestica	MD09G1122600.v1.1 MD09G1122800.v1.1 MD17G1113500.v1.1
prunus_persica	Prupe.3G200900_v2.0.a1
pyrus_communis	pycom09g04700 pycom09g04710 pycom17g10510
rosa_chinensis	RchiOBHm_Chr2g0156561 RchiOBHm_Chr2g0156581
rosa_laevigata	RLG00000020921
rosa_multiflora	Rmu_sc0011512.1_g000006
rosa_roxburghii	Rroxscaffold_2G00092940
rosa_rugosa	Rorug02G0454300
rosa_samantha	Rh2AG520100 Rh2BG532600 Rh2BG533100 Rh2CG505100 Rh2DG541500 Rh2DG541900
rosa_wichuraiana	Rw2G042880 Rw2G042890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2189, 2468
AarI	CACCTGC	1 cut(s)	1663
Acc16I	TGCGCA	1 cut(s)	62
Acc36I	ACCTGC	2 cut(s)	1663, 2701
AccB1I	GGYRCC	3 cut(s)	103, 263, 2420
AccII	CGCG	5 cut(s)	532, 783, 1115, 1721, 2103
AccIII	TCCGGA	1 cut(s)	2565
AclI	AACGTT	1 cut(s)	300
AclWI	GGATC	4 cut(s)	1316, 1473, 1532, 1919
AcoI	YGGCCR	3 cut(s)	784, 1185, 2166
AcsI	RAATTY	6 cut(s)	154, 413, 1342, 1566, 2828, 2974
AcuI	CTGAAG	2 cut(s)	1761, 2255
AcyI	GRCGYC	1 cut(s)	2562
AfaI	GTAC	8 cut(s)	17, 24, 338, 365, 437, 1203, 1724, 2587
AflII	CTTAAG	1 cut(s)	976
AflIII	ACRYGT	2 cut(s)	1719, 2881
AhlI	ACTAGT	2 cut(s)	970, 1777
AjnI	CCWGG	2 cut(s)	144, 2601
AleI	CACNNNNGTG	1 cut(s)	2770
AloI	GAACNNNNNNTCC	2 cut(s)	642, 674
Alw21I	GWGCWC	4 cut(s)	1505, 1878, 2145, 2879
Alw26I	GTCTC	6 cut(s)	252, 645, 712, 937, 1486, 1699
Alw44I	GTGCAC	1 cut(s)	2141
AlwI	GGATC	4 cut(s)	1316, 1473, 1532, 1919
Aor13HI	TCCGGA	1 cut(s)	2565
AoxI	GGCC	7 cut(s)	784, 1004, 1185, 1979, 2166, 2392, 2820
ApaLI	GTGCAC	1 cut(s)	2141
ApeKI	GCWGC	2 cut(s)	113, 2795
ApoI	RAATTY	6 cut(s)	154, 413, 1342, 1566, 2828, 2974
Asp700I	GAANNNNTTC	4 cut(s)	200, 417, 1061, 1084
AspLEI	GCGC	3 cut(s)	63, 475, 532
AspS9I	GGNCC	5 cut(s)	1004, 1047, 2454, 2605, 2820
AsuC2I	CCSGG	2 cut(s)	10, 2161
AsuII	TTCGAA	1 cut(s)	158
AsuNHI	GCTAGC	1 cut(s)	2744
AvaII	GGWCC	3 cut(s)	1047, 2454, 2605
AxyI	CCTNAGG	1 cut(s)	2445
BaeGI	GKGCMC	1 cut(s)	2145
BalI	TGGCCA	1 cut(s)	2168
BanI	GGYRCC	3 cut(s)	103, 263, 2420
BanII	GRGCYC	4 cut(s)	1505, 1878, 2813, 2879
BbsI	GAAGAC	1 cut(s)	875
Bbv12I	GWGCWC	4 cut(s)	1505, 1878, 2145, 2879
BbvCI	CCTCAGC	1 cut(s)	828
BbvI	GCAGC	2 cut(s)	100, 2782
BceAI	ACGGC	6 cut(s)	117, 241, 251, 454, 2215, 2295
BcgI	CGANNNNNNTGC	4 cut(s)	1247, 1281, 1565, 1599
BciT130I	CCWGG	2 cut(s)	146, 2603
BciVI	GTATCC	1 cut(s)	1119
BclI	TGATCA	3 cut(s)	850, 1677, 2373
BcnI	CCSGG	2 cut(s)	10, 2161
BcoDI	GTCTC	6 cut(s)	252, 645, 712, 937, 1486, 1699
BcuI	ACTAGT	2 cut(s)	970, 1777
BfaI	CTAG	6 cut(s)	72, 971, 1778, 2309, 2741, 2745
BfmI	CTRYAG	3 cut(s)	1266, 1893, 2768
BfoI	RGCGCY	1 cut(s)	476
BfrI	CTTAAG	1 cut(s)	976
BfuAI	ACCTGC	2 cut(s)	1663, 2701
BfuI	GTATCC	1 cut(s)	1119
BglII	AGATCT	1 cut(s)	1059
BisI	GCNGC	7 cut(s)	114, 471, 784, 787, 1185, 1455, 2796
BlpI	GCTNAGC	1 cut(s)	836
BlsI	GCNGC	7 cut(s)	115, 472, 785, 788, 1186, 1456, 2797
BmcAI	AGTACT	1 cut(s)	2587
Bme1390I	CCNGG	4 cut(s)	10, 146, 2161, 2603
Bme18I	GGWCC	3 cut(s)	1047, 2454, 2605
BmgT120I	GGNCC	5 cut(s)	1004, 1047, 2454, 2605, 2820
BmiI	GGNNCC	4 cut(s)	105, 265, 1005, 2422
BmrFI	CCNGG	4 cut(s)	10, 146, 2161, 2603
BmrI	ACTGGG	1 cut(s)	308
BmtI	GCTAGC	1 cut(s)	2748
BmuI	ACTGGG	1 cut(s)	308
BoxI	GACNNNNGTC	1 cut(s)	1292
BpiI	GAAGAC	1 cut(s)	875
BpmI	CTGGAG	3 cut(s)	1863, 2173, 2503
Bpu10I	CCTNAGC	1 cut(s)	828
Bpu1102I	GCTNAGC	1 cut(s)	836
Bpu14I	TTCGAA	1 cut(s)	158
BpuEI	CTTGAG	3 cut(s)	1059, 1385, 1688
BpuMI	CCSGG	2 cut(s)	10, 2161
BsaBI	GATNNNNATC	2 cut(s)	134, 855
BsaHI	GRCGYC	1 cut(s)	2562
BsaI	GGTCTC	4 cut(s)	252, 645, 712, 1699
BsaJI	CCNNGG	9 cut(s)	144, 205, 424, 1113, 1230, 1971, 2025, 2472, 2625
BsaWI	WCCGGW	3 cut(s)	1462, 2291, 2565
BsaXI	ACNNNNNCTCC	2 cut(s)	642, 672
Bse1I	ACTGG	4 cut(s)	314, 702, 1821, 1863
Bse21I	CCTNAGG	1 cut(s)	2445
Bse8I	GATNNNNATC	2 cut(s)	134, 855
BseAI	TCCGGA	1 cut(s)	2565
BseBI	CCWGG	2 cut(s)	146, 2603
BseDI	CCNNGG	9 cut(s)	144, 205, 424, 1113, 1230, 1971, 2025, 2472, 2625
BseJI	GATNNNNATC	2 cut(s)	134, 855
BseMII	CTCAG	7 cut(s)	256, 402, 819, 827, 1938, 2436, 2858
BseNI	ACTGG	4 cut(s)	314, 702, 1821, 1863
BseSI	GKGCMC	1 cut(s)	2145
BseX3I	CGGCCG	1 cut(s)	784
BseXI	GCAGC	2 cut(s)	100, 2782
BseYI	CCCAGC	1 cut(s)	392
Bsh1236I	CGCG	5 cut(s)	532, 783, 1115, 1721, 2103
Bsh1285I	CGRYCG	1 cut(s)	787
BshFI	GGCC	7 cut(s)	786, 1006, 1187, 1981, 2168, 2394, 2822
BshNI	GGYRCC	3 cut(s)	103, 263, 2420
BsiEI	CGRYCG	1 cut(s)	787
BsiHKAI	GWGCWC	4 cut(s)	1505, 1878, 2145, 2879
BsiSI	CCGG	6 cut(s)	9, 1463, 1982, 2160, 2292, 2566
BslFI	GGGAC	3 cut(s)	295, 1248, 2320
BsmAI	GTCTC	6 cut(s)	252, 645, 712, 937, 1486, 1699
BsmFI	GGGAC	3 cut(s)	295, 1248, 2320
BsmI	GAATGC	5 cut(s)	907, 2078, 2182, 2323, 2767
BsnI	GGCC	7 cut(s)	786, 1006, 1187, 1981, 2168, 2394, 2822
Bso31I	GGTCTC	4 cut(s)	252, 645, 712, 1699
Bsp119I	TTCGAA	1 cut(s)	158
Bsp1286I	GDGCHC	5 cut(s)	1505, 1878, 2145, 2813, 2879
Bsp13I	TCCGGA	1 cut(s)	2565
Bsp1720I	GCTNAGC	1 cut(s)	836
Bsp19I	CCATGG	3 cut(s)	1230, 1971, 2625
BspANI	GGCC	7 cut(s)	786, 1006, 1187, 1981, 2168, 2394, 2822
BspCNI	CTCAG	7 cut(s)	255, 401, 820, 828, 1937, 2437, 2859
BspEI	TCCGGA	1 cut(s)	2565
BspFNI	CGCG	5 cut(s)	532, 783, 1115, 1721, 2103
BspHI	TCATGA	1 cut(s)	2397
BspLI	GGNNCC	4 cut(s)	105, 265, 1005, 2422
BspMAI	CTGCAG	2 cut(s)	1270, 2772
BspMI	ACCTGC	2 cut(s)	1663, 2701
BspOI	GCTAGC	1 cut(s)	2748
BspPI	GGATC	4 cut(s)	1316, 1473, 1532, 1919
BspQI	GCTCTTC	1 cut(s)	1800
BspT104I	TTCGAA	1 cut(s)	158
BspT107I	GGYRCC	3 cut(s)	103, 263, 2420
BspTI	CTTAAG	1 cut(s)	976
BspTNI	GGTCTC	4 cut(s)	252, 645, 712, 1699
BsrI	ACTGG	4 cut(s)	314, 702, 1821, 1863
BssECI	CCNNGG	9 cut(s)	144, 205, 424, 1113, 1230, 1971, 2025, 2472, 2625
BssNI	GRCGYC	1 cut(s)	2562
BssT1I	CCWWGG	6 cut(s)	424, 1230, 1971, 2025, 2472, 2625
Bst2UI	CCWGG	2 cut(s)	146, 2603
Bst4CI	ACNGT	5 cut(s)	452, 656, 671, 1483, 2960
Bst6I	CTCTTC	5 cut(s)	35, 1311, 1482, 1652, 1800
BstACI	GRCGYC	1 cut(s)	2562
BstAFI	CTTAAG	1 cut(s)	976
BstAPI	GCANNNNNTGC	2 cut(s)	110, 1561
BstBI	TTCGAA	1 cut(s)	158
BstC8I	GCNNGC	5 cut(s)	355, 443, 528, 2284, 2746
BstDSI	CCRYGG	5 cut(s)	205, 1113, 1230, 1971, 2625
BstENI	CCTNNNNNAGG	1 cut(s)	2024
BstFNI	CGCG	5 cut(s)	532, 783, 1115, 1721, 2103
BstH2I	RGCGCY	1 cut(s)	476
BstHHI	GCGC	3 cut(s)	63, 475, 532
BstMAI	GTCTC	6 cut(s)	252, 645, 712, 937, 1486, 1699
BstMCI	CGRYCG	1 cut(s)	787
BstMWI	GCNNNNNNNGC	7 cut(s)	101, 110, 818, 1561, 1826, 2693, 2861
BstNI	CCWGG	2 cut(s)	146, 2603
BstNSI	RCATGY	2 cut(s)	927, 1606
BstPAI	GACNNNNGTC	1 cut(s)	1292
BstSCI	CCNGG	4 cut(s)	8, 144, 2159, 2601
BstSFI	CTRYAG	3 cut(s)	1266, 1893, 2768
BstSLI	GKGCMC	1 cut(s)	2145
BstUI	CGCG	5 cut(s)	532, 783, 1115, 1721, 2103
BstV1I	GCAGC	2 cut(s)	100, 2782
BstV2I	GAAGAC	1 cut(s)	875
BstX2I	RGATCY	3 cut(s)	1059, 1524, 1911
BstXI	CCANNNNNNTGG	2 cut(s)	212, 2632
BstYI	RGATCY	3 cut(s)	1059, 1524, 1911
BstZI	CGGCCG	1 cut(s)	784
Bsu36I	CCTNAGG	1 cut(s)	2445
BsuI	GTATCC	1 cut(s)	1119
BsuRI	GGCC	7 cut(s)	786, 1006, 1187, 1981, 2168, 2394, 2822
BtgI	CCRYGG	5 cut(s)	205, 1113, 1230, 1971, 2625
BtgZI	GCGATG	1 cut(s)	2882
BtsI	GCAGTG	5 cut(s)	872, 1370, 1570, 2765, 2777
BtsIMutI	CAGTG	7 cut(s)	872, 1370, 1570, 2626, 2765, 2777, 2864
BveI	ACCTGC	2 cut(s)	1663, 2701
Cac8I	GCNNGC	5 cut(s)	355, 443, 528, 2284, 2746
CciI	TCATGA	1 cut(s)	2397
CciNI	GCGGCCGC	1 cut(s)	784
CfoI	GCGC	3 cut(s)	63, 475, 532
Cfr13I	GGNCC	5 cut(s)	1004, 1047, 2454, 2605, 2820
Cfr42I	CCGCGG	1 cut(s)	1116
CseI	GACGC	1 cut(s)	2551
Csp6I	GTAC	8 cut(s)	16, 23, 337, 364, 436, 1202, 1723, 2586
CspCI	CAANNNNNGTGG	2 cut(s)	2654, 2689
CviQI	GTAC	8 cut(s)	16, 23, 337, 364, 436, 1202, 1723, 2586
EaeI	YGGCCR	3 cut(s)	784, 1185, 2166
EagI	CGGCCG	1 cut(s)	784
Eam1104I	CTCTTC	5 cut(s)	35, 1311, 1482, 1652, 1800
EarI	CTCTTC	5 cut(s)	35, 1311, 1482, 1652, 1800
Ecl136II	GAGCTC	3 cut(s)	1503, 1876, 2877
EclXI	CGGCCG	1 cut(s)	784
Eco130I	CCWWGG	6 cut(s)	424, 1230, 1971, 2025, 2472, 2625
Eco24I	GRGCYC	4 cut(s)	1505, 1878, 2813, 2879
Eco31I	GGTCTC	4 cut(s)	252, 645, 712, 1699
Eco32I	GATATC	1 cut(s)	2149
Eco47I	GGWCC	3 cut(s)	1047, 2454, 2605
Eco52I	CGGCCG	1 cut(s)	784
Eco53kI	GAGCTC	3 cut(s)	1503, 1876, 2877
Eco57I	CTGAAG	2 cut(s)	1761, 2255
Eco81I	CCTNAGG	1 cut(s)	2445
EcoICRI	GAGCTC	3 cut(s)	1503, 1876, 2877
EcoNI	CCTNNNNNAGG	1 cut(s)	2024
EcoO109I	RGGNCCY	1 cut(s)	2605
EcoRI	GAATTC	3 cut(s)	154, 413, 1342
EcoRII	CCWGG	2 cut(s)	144, 2601
EcoRV	GATATC	1 cut(s)	2149
EcoT14I	CCWWGG	6 cut(s)	424, 1230, 1971, 2025, 2472, 2625
EcoT22I	ATGCAT	3 cut(s)	1588, 2325, 2994
EcoT38I	GRGCYC	4 cut(s)	1505, 1878, 2813, 2879
ErhI	CCWWGG	6 cut(s)	424, 1230, 1971, 2025, 2472, 2625
FalI	AAGNNNNNCTT	6 cut(s)	1049, 1081, 1794, 1826, 2842, 2874
FaqI	GGGAC	3 cut(s)	295, 1248, 2320
FauI	CCCGC	1 cut(s)	2346
FbaI	TGATCA	3 cut(s)	850, 1677, 2373
Fnu4HI	GCNGC	7 cut(s)	114, 471, 784, 787, 1185, 1455, 2796
FriOI	GRGCYC	4 cut(s)	1505, 1878, 2813, 2879
Fsp4HI	GCNGC	7 cut(s)	114, 471, 784, 787, 1185, 1455, 2796
FspBI	CTAG	6 cut(s)	72, 971, 1778, 2309, 2741, 2745
FspI	TGCGCA	1 cut(s)	62
GlaI	GCGC	3 cut(s)	62, 474, 531
GluI	GCNGC	7 cut(s)	114, 471, 784, 787, 1185, 1455, 2796
GsaI	CCCAGC	1 cut(s)	396
GsuI	CTGGAG	3 cut(s)	1863, 2173, 2503
HaeII	RGCGCY	1 cut(s)	476
HaeIII	GGCC	7 cut(s)	786, 1006, 1187, 1981, 2168, 2394, 2822
HapII	CCGG	6 cut(s)	9, 1463, 1982, 2160, 2292, 2566
HgaI	GACGC	1 cut(s)	2551
HhaI	GCGC	3 cut(s)	63, 475, 532
Hin1I	GRCGYC	1 cut(s)	2562
Hin6I	GCGC	3 cut(s)	61, 473, 530
HinP1I	GCGC	3 cut(s)	61, 473, 530
HincII	GTYRAC	2 cut(s)	223, 2224
HindII	GTYRAC	2 cut(s)	223, 2224
HindIII	AAGCTT	2 cut(s)	882, 1950
HinfI	GANTC	9 cut(s)	429, 1033, 1210, 1236, 2136, 2333, 2459, 2889, 2982
HpaII	CCGG	6 cut(s)	9, 1463, 1982, 2160, 2292, 2566
Hpy166II	GTNNAC	8 cut(s)	223, 366, 1610, 2047, 2143, 2224, 2297, 2368
Hpy8I	GTNNAC	8 cut(s)	223, 366, 1610, 2047, 2143, 2224, 2297, 2368
Hpy99I	CGWCG	3 cut(s)	1291, 1487, 1580
HpyAV	CCTTC	9 cut(s)	181, 504, 641, 769, 1687, 1937, 1953, 2393, 2552
HpyCH4III	ACNGT	5 cut(s)	452, 656, 671, 1483, 2960
HpyCH4IV	ACGT	3 cut(s)	55, 300, 2883
HpyF10VI	GCNNNNNNNGC	7 cut(s)	101, 110, 818, 1561, 1826, 2693, 2861
HpySE526I	ACGT	3 cut(s)	55, 300, 2883
Hsp92I	GRCGYC	1 cut(s)	2562
HspAI	GCGC	3 cut(s)	61, 473, 530
Kpn2I	TCCGGA	1 cut(s)	2565
Ksp22I	TGATCA	3 cut(s)	850, 1677, 2373
KspI	CCGCGG	1 cut(s)	1116
LguI	GCTCTTC	1 cut(s)	1800
LmnI	GCTCC	2 cut(s)	552, 1173
Lsp1109I	GCAGC	2 cut(s)	100, 2782
MaeI	CTAG	6 cut(s)	72, 971, 1778, 2309, 2741, 2745
MaeII	ACGT	3 cut(s)	55, 300, 2883
MaeIII	GTNAC	7 cut(s)	301, 796, 1225, 1458, 1637, 2302, 2412
MfeI	CAATTG	2 cut(s)	765, 1496
MflI	RGATCY	3 cut(s)	1059, 1524, 1911
MhlI	GDGCHC	5 cut(s)	1505, 1878, 2145, 2813, 2879
MlsI	TGGCCA	1 cut(s)	2168
MluI	ACGCGT	1 cut(s)	1719
MluNI	TGGCCA	1 cut(s)	2168
MlyI	GAGTC	5 cut(s)	438, 1230, 2342, 2468, 2976
MmeI	TCCRAC	2 cut(s)	1682, 2866
Mox20I	TGGCCA	1 cut(s)	2168
Mph1103I	ATGCAT	3 cut(s)	1588, 2325, 2994
MroI	TCCGGA	1 cut(s)	2565
MroXI	GAANNNNTTC	4 cut(s)	200, 417, 1061, 1084
MscI	TGGCCA	1 cut(s)	2168
MseI	TTAA	6 cut(s)	132, 977, 1325, 1812, 2117, 2610
MslI	CAYNNNNRTG	4 cut(s)	450, 1617, 2402, 2770
Msp20I	TGGCCA	1 cut(s)	2168
MspA1I	CMGCKG	3 cut(s)	392, 1115, 3000
MspCI	CTTAAG	1 cut(s)	976
MspI	CCGG	6 cut(s)	9, 1463, 1982, 2160, 2292, 2566
MspR9I	CCNGG	4 cut(s)	10, 146, 2161, 2603
MunI	CAATTG	2 cut(s)	765, 1496
Mva1269I	GAATGC	5 cut(s)	907, 2078, 2182, 2323, 2767
MvaI	CCWGG	2 cut(s)	146, 2603
MvnI	CGCG	5 cut(s)	532, 783, 1115, 1721, 2103
MwoI	GCNNNNNNNGC	7 cut(s)	101, 110, 818, 1561, 1826, 2693, 2861
NciI	CCSGG	2 cut(s)	10, 2161
NcoI	CCATGG	3 cut(s)	1230, 1971, 2625
NheI	GCTAGC	1 cut(s)	2744
NlaIV	GGNNCC	4 cut(s)	105, 265, 1005, 2422
NmeAIII	GCCGAG	1 cut(s)	2571
NmuCI	GTSAC	2 cut(s)	1225, 1637
NotI	GCGGCCGC	1 cut(s)	784
NsbI	TGCGCA	1 cut(s)	62
NsiI	ATGCAT	3 cut(s)	1588, 2325, 2994
NspI	RCATGY	2 cut(s)	927, 1606
NspV	TTCGAA	1 cut(s)	158
OliI	CACNNNNGTG	1 cut(s)	2770
PagI	TCATGA	1 cut(s)	2397
PaqCI	CACCTGC	1 cut(s)	1663
PciSI	GCTCTTC	1 cut(s)	1800
PcsI	WCGNNNNNNNCGW	1 cut(s)	31
PctI	GAATGC	5 cut(s)	907, 2078, 2182, 2323, 2767
PdmI	GAANNNNTTC	4 cut(s)	200, 417, 1061, 1084
PfeI	GAWTC	4 cut(s)	1033, 1210, 2136, 2889
PflFI	GACNNNGTC	1 cut(s)	2458
PkrI	GCNGC	7 cut(s)	115, 472, 785, 788, 1186, 1456, 2797
PleI	GAGTC	5 cut(s)	437, 1230, 2341, 2467, 2976
PpsI	GAGTC	5 cut(s)	437, 1230, 2341, 2467, 2976
PpuMI	RGGWCCY	1 cut(s)	2605
PshAI	GACNNNNGTC	1 cut(s)	1292
PsiI	TTATAA	2 cut(s)	2189, 2468
Psp124BI	GAGCTC	3 cut(s)	1505, 1878, 2879
Psp1406I	AACGTT	1 cut(s)	300
Psp5II	RGGWCCY	1 cut(s)	2605
Psp6I	CCWGG	2 cut(s)	144, 2601
PspFI	CCCAGC	1 cut(s)	392
PspGI	CCWGG	2 cut(s)	144, 2601
PspN4I	GGNNCC	4 cut(s)	105, 265, 1005, 2422
PspPI	GGNCC	5 cut(s)	1004, 1047, 2454, 2605, 2820
PspPPI	RGGWCCY	1 cut(s)	2605
PstI	CTGCAG	2 cut(s)	1270, 2772
PsuI	RGATCY	3 cut(s)	1059, 1524, 1911
PsyI	GACNNNGTC	1 cut(s)	2458
PvuII	CAGCTG	1 cut(s)	392
RsaI	GTAC	8 cut(s)	17, 24, 338, 365, 437, 1203, 1724, 2587
RsaNI	GTAC	8 cut(s)	16, 23, 337, 364, 436, 1202, 1723, 2586
RseI	CAYNNNNRTG	4 cut(s)	450, 1617, 2402, 2770
SacI	GAGCTC	3 cut(s)	1505, 1878, 2879
SacII	CCGCGG	1 cut(s)	1116
SapI	GCTCTTC	1 cut(s)	1800
SaqAI	TTAA	6 cut(s)	132, 977, 1325, 1812, 2117, 2610
SatI	GCNGC	7 cut(s)	114, 471, 784, 787, 1185, 1455, 2796
Sau96I	GGNCC	5 cut(s)	1004, 1047, 2454, 2605, 2820
ScaI	AGTACT	1 cut(s)	2587
SchI	GAGTC	5 cut(s)	438, 1230, 2342, 2468, 2976
ScrFI	CCNGG	4 cut(s)	10, 146, 2161, 2603
SduI	GDGCHC	5 cut(s)	1505, 1878, 2145, 2813, 2879
SfcI	CTRYAG	3 cut(s)	1266, 1893, 2768
Sfr303I	CCGCGG	1 cut(s)	1116
SfuI	TTCGAA	1 cut(s)	158
SgrBI	CCGCGG	1 cut(s)	1116
SinI	GGWCC	3 cut(s)	1047, 2454, 2605
SmiMI	CAYNNNNRTG	4 cut(s)	450, 1617, 2402, 2770
SmlI	CTYRAG	4 cut(s)	976, 1074, 1364, 1667
SmoI	CTYRAG	4 cut(s)	976, 1074, 1364, 1667
SpeI	ACTAGT	2 cut(s)	970, 1777
SspI	AATATT	1 cut(s)	1596
SspMI	CTAG	6 cut(s)	72, 971, 1778, 2309, 2741, 2745
SstI	GAGCTC	3 cut(s)	1505, 1878, 2879
StyD4I	CCNGG	4 cut(s)	8, 144, 2159, 2601
StyI	CCWWGG	6 cut(s)	424, 1230, 1971, 2025, 2472, 2625
TaaI	ACNGT	5 cut(s)	452, 656, 671, 1483, 2960
TaiI	ACGT	3 cut(s)	58, 303, 2886
TaqI	TCGA	9 cut(s)	158, 935, 1257, 1468, 1485, 1542, 1880, 2724, 2980
TaqII	GACCGA	4 cut(s)	736, 1723, 1772, 2471
TatI	WGTACW	3 cut(s)	336, 363, 2585
TauI	GCSGC	5 cut(s)	473, 786, 789, 1187, 1457
TfiI	GAWTC	4 cut(s)	1033, 1210, 2136, 2889
Tru1I	TTAA	6 cut(s)	132, 977, 1325, 1812, 2117, 2610
Tru9I	TTAA	6 cut(s)	132, 977, 1325, 1812, 2117, 2610
TscAI	CASTG	7 cut(s)	879, 1377, 1577, 2626, 2772, 2777, 2871
TseFI	GTSAC	2 cut(s)	1225, 1637
TseI	GCWGC	2 cut(s)	113, 2795
Tsp45I	GTSAC	2 cut(s)	1225, 1637
TspGWI	ACGGA	6 cut(s)	23, 222, 1304, 1593, 2100, 2509
TspRI	CASTG	7 cut(s)	879, 1377, 1577, 2626, 2772, 2777, 2871
Tth111I	GACNNNGTC	1 cut(s)	2458
Vha464I	CTTAAG	1 cut(s)	976
VneI	GTGCAC	1 cut(s)	2141
VpaK11BI	GGWCC	3 cut(s)	1047, 2454, 2605
XagI	CCTNNNNNAGG	1 cut(s)	2024
XapI	RAATTY	6 cut(s)	154, 413, 1342, 1566, 2828, 2974
XceI	RCATGY	2 cut(s)	927, 1606
XcmI	CCANNNNNNNNNTGG	1 cut(s)	212
XmnI	GAANNNNTTC	4 cut(s)	200, 417, 1061, 1084
XspI	CTAG	6 cut(s)	72, 971, 1778, 2309, 2741, 2745
ZrmI	AGTACT	1 cut(s)	2587
Zsp2I	ATGCAT	3 cut(s)	1588, 2325, 2994

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.