pycom17g12800

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
10517610 .. 10520631
3022 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1419 bp
ATGTTATGCTCGCTGTTGAAGCGTGGATTGGGGAATCTGTGCAGATCGGCGTTGAGGTTTCTTGACAGGTCGATTTCGAGAGCTATGGGCTGCTTCTTCGGTTGCTTTCGGGACAAGGACGATTGCCACCTCCGCTCTCGCCCTCACCTCGTCTCTCAGTCCTCTCGTAACCCCCAGACGGAAGTCGTGATATCTCAAAACCGTTTGTCTTATCTATTTTCAGCTGAAGTGCACCTTCTTCTGCAGGCCAAGTTTCTTAAAGCTTGTGGTACCATAGCGGAAACCCCAGCTGAAATTCGTAAAGTGTCTTCAAGGTTAAATGGCTCATCCCATCATGATAGAGATTCACAGCCTCCAAAATTCAACTCATGGCTCCCAAACACATCCATTAGAAATCTTCAGCAAGAGTTGGATCAACCAGATCATCCCCTTATGCCTATGAAGTACAATGAAGAGTGGGGAATGGGTTCAGGTCCTTCTGAGCATACGCCTAGCAGCCCTTCTGGAGGCAGCGGAATAGGTACTGATTCTACAGTGAAGAGTCATACCAACCGGACTGAGAATATTACAACTCCAGATGTCCAGTGCAGGAGCAAGGCTGTTCGCTTTGAATGCGATAATAATACAAATTCCTCCAGAGGTTCTTCATCCGAAAATTATAACCGGAGTTCAAAAGTATGTGAAACTCCAGGAAAACAGAGCATATCAAAGCCTTCAGTTTATCCAACGCCACTAACTCTTTCAGAGGAGATGCAGACACCAGGAACTGTTTTCCCTGCAAACCTCCAAAACTTTCCAAATGGAAAGGCAAGAATCAGGTCCCAGTATGTGTATTCGGTGCAAAACCCTGTGGACGGCATCTCTCAGTGGAATGTACTGAAAGACGAAGATCCTAACTCACTTGGACATTCTGGTGAGCCAAGAGAATCTCTTAACGACTGGGGAAATGCAACCCCTACATCCGAAGAGGGGTCAAAACAAATGTCATCTGGACAAGAGGTCAATGTGGAATCAAGTTTGTCCGCCTGGCTGAAGCCGGTAACTCAAGATAACAACAATCACTTTGGTTATGTTCCTGGCCAAACTCGTCATTTTGGAAGAACTCCTGTGGACAGGCCTATCATTGGGCTTGTGGCTACTCACTGGAATGAAGATGAACATACTCGTGTCTCACCCAAGTGGTGGGATGGAAACGGAATCCCAAATTCAACAAACAAATACAAGGAGGATCAGAAGGTGAGTTGGCATGCCACTCCGTTTGAAGAAAGGTTGGAAAAGGCACTGTCCGAAGAGAGTTTCATCTCGCAGAGAAAAAACATGGAGGGAAAGCCGATTGTTTTTGACGAGAACGATGAAAGTGACACAGCCCTTTCTCAGTTGCAAACTTCATCCCAGCCGAAGTCCGTGGTTTCATTTTGA

Protein Analysis

473

Amino Acids

52.7

Weight (kDa)

6.55

Isoelectric Point (pI)

51.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 660
Acc65I GGTACC 1 cut(s) 269
AccB1I GGYRCC 1 cut(s) 269
AccB7I CCANNNNNTGG 1 cut(s) 1182
AccBSI CCGCTC 1 cut(s) 135
AciI CCGC 4 cut(s) 133, 278, 513, 1023
AclWI GGATC 3 cut(s) 420, 884, 1236
AcoI YGGCCR 1 cut(s) 1078
AcsI RAATTY 4 cut(s) 294, 359, 628, 1204
AcuI CTGAAG 4 cut(s) 246, 383, 699, 1052
AfaI GTAC 4 cut(s) 271, 446, 523, 876
AfiI CCNNNNNNNGG 6 cut(s) 178, 506, 854, 969, 1124, 1182
AgsI TTSAA 7 cut(s) 19, 312, 364, 611, 672, 1209, 1262
AhdI GACNNNNNGTC 1 cut(s) 998
AjnI CCWGG 4 cut(s) 688, 760, 1025, 1075
AjuI GAANNNNNNNTTGG 2 cut(s) 11, 43
AleI CACNNNNGTG 1 cut(s) 1177
AluBI AGCT 4 cut(s) 83, 224, 263, 290
AluI AGCT 4 cut(s) 83, 224, 263, 290
Alw21I GWGCWC 1 cut(s) 234
Alw26I GTCTC 2 cut(s) 157, 1174
Alw44I GTGCAC 1 cut(s) 230
AlwI GGATC 3 cut(s) 420, 884, 1236
AlwNI CAGNNNCTG 1 cut(s) 767
AoxI GGCC 3 cut(s) 246, 1078, 1115
ApaLI GTGCAC 1 cut(s) 230
ApeKI GCWGC 3 cut(s) 90, 495, 510
ApoI RAATTY 4 cut(s) 294, 359, 628, 1204
ArsI GACNNNNNNTTYG 2 cut(s) 968, 1000
Asp700I GAANNNNTTC 1 cut(s) 466
Asp718I GGTACC 1 cut(s) 269
AspS9I GGNCC 2 cut(s) 473, 819
AsuHPI GGTGA 4 cut(s) 137, 926, 1164, 1249
AvaII GGWCC 2 cut(s) 473, 819
BaeGI GKGCMC 1 cut(s) 234
BalI TGGCCA 1 cut(s) 1080
BanI GGYRCC 1 cut(s) 269
BarI GAAGNNNNNNTAC 2 cut(s) 292, 324
BauI CACGAG 1 cut(s) 1164
BbsI GAAGAC 1 cut(s) 300
Bbv12I GWGCWC 1 cut(s) 234
BbvI GCAGC 3 cut(s) 77, 507, 522
BccI CCATC 2 cut(s) 339, 1181
BceAI ACGGC 1 cut(s) 871
BciT130I CCWGG 4 cut(s) 690, 762, 1027, 1077
BcoDI GTCTC 2 cut(s) 157, 1174
BfaI CTAG 1 cut(s) 492
BfmI CTRYAG 2 cut(s) 242, 531
BisI GCNGC 3 cut(s) 91, 496, 511
BlsI GCNGC 3 cut(s) 92, 497, 512
Bme1390I CCNGG 4 cut(s) 690, 762, 1027, 1077
Bme18I GGWCC 2 cut(s) 473, 819
BmeRI GACNNNNNGTC 1 cut(s) 998
BmgT120I GGNCC 2 cut(s) 473, 819
BmiI GGNNCC 3 cut(s) 271, 374, 821
BmrFI CCNGG 4 cut(s) 690, 762, 1027, 1077
BmrI ACTGGG 2 cut(s) 817, 949
BmsI GCATC 2 cut(s) 741, 867
BmuI ACTGGG 2 cut(s) 817, 949
BoxI GACNNNNGTC 1 cut(s) 182
BpiI GAAGAC 1 cut(s) 300
BpmI CTGGAG 4 cut(s) 525, 558, 619, 672
BpuEI CTTGAG 1 cut(s) 1029
BsaJI CCNNGG 1 cut(s) 1404
BsaWI WCCGGW 2 cut(s) 552, 663
Bsc4I CCNNNNNNNGG 6 cut(s) 178, 506, 854, 969, 1124, 1182
Bse118I RCCGGY 1 cut(s) 1036
Bse1I ACTGG 4 cut(s) 583, 823, 944, 1148
BseBI CCWGG 4 cut(s) 690, 762, 1027, 1077
BseDI CCNNGG 1 cut(s) 1404
BseGI GGATG 7 cut(s) 326, 383, 424, 647, 959, 1192, 1388
BseLI CCNNNNNNNGG 6 cut(s) 178, 506, 854, 969, 1124, 1182
BseMII CTCAG 5 cut(s) 170, 471, 549, 878, 1388
BseNI ACTGG 4 cut(s) 583, 823, 944, 1148
BseRI GAGGAG 1 cut(s) 761
BseSI GKGCMC 1 cut(s) 234
BseXI GCAGC 3 cut(s) 77, 507, 522
BseYI CCCAGC 2 cut(s) 286, 1392
BsgI GTGCAG 2 cut(s) 61, 607
BshFI GGCC 3 cut(s) 248, 1080, 1117
BshNI GGYRCC 1 cut(s) 269
BsiHKAI GWGCWC 1 cut(s) 234
BsiSI CCGG 3 cut(s) 553, 664, 1037
BslFI GGGAC 2 cut(s) 125, 805
BslI CCNNNNNNNGG 6 cut(s) 178, 506, 854, 969, 1124, 1182
BsmAI GTCTC 2 cut(s) 157, 1174
BsmBI CGTCTC 1 cut(s) 157
BsmFI GGGAC 2 cut(s) 125, 805
BsmI GAATGC 1 cut(s) 617
BsnI GGCC 3 cut(s) 248, 1080, 1117
Bsp1286I GDGCHC 1 cut(s) 234
Bsp143I GATC 5 cut(s) 44, 412, 421, 889, 1228
BspACI CCGC 4 cut(s) 133, 278, 513, 1023
BspANI GGCC 3 cut(s) 248, 1080, 1117
BspCNI CTCAG 5 cut(s) 169, 472, 550, 877, 1387
BspHI TCATGA 1 cut(s) 334
BspLI GGNNCC 3 cut(s) 271, 374, 821
BspMAI CTGCAG 1 cut(s) 246
BspPI GGATC 3 cut(s) 420, 884, 1236
BspT107I GGYRCC 1 cut(s) 269
BsrBI CCGCTC 1 cut(s) 135
BsrFI RCCGGY 1 cut(s) 1036
BsrI ACTGG 4 cut(s) 583, 823, 944, 1148
BssAI RCCGGY 1 cut(s) 1036
BssECI CCNNGG 1 cut(s) 1404
BssMI GATC 5 cut(s) 44, 412, 421, 889, 1228
BssSI CACGAG 1 cut(s) 1164
Bst2BI CACGAG 1 cut(s) 1164
Bst2UI CCWGG 4 cut(s) 690, 762, 1027, 1077
Bst4CI ACNGT 4 cut(s) 203, 535, 769, 1284
Bst6I CTCTTC 4 cut(s) 447, 533, 960, 1284
BstC8I GCNNGC 3 cut(s) 11, 246, 1248
BstDEI CTNAG 5 cut(s) 156, 480, 558, 864, 1374
BstDSI CCRYGG 1 cut(s) 1404
BstENI CCTNNNNNAGG 1 cut(s) 504
BstF5I GGATG 7 cut(s) 326, 383, 424, 647, 959, 1192, 1388
BstKTI GATC 5 cut(s) 47, 415, 424, 892, 1231
BstMAI GTCTC 2 cut(s) 157, 1174
BstMBI GATC 5 cut(s) 44, 412, 421, 889, 1228
BstMWI GCNNNNNNNGC 3 cut(s) 19, 132, 612
BstNI CCWGG 4 cut(s) 690, 762, 1027, 1077
BstNSI RCATGY 1 cut(s) 1250
BstPAI GACNNNNGTC 1 cut(s) 182
BstSCI CCNGG 4 cut(s) 688, 760, 1025, 1075
BstSFI CTRYAG 2 cut(s) 242, 531
BstSLI GKGCMC 1 cut(s) 234
BstV1I GCAGC 3 cut(s) 77, 507, 522
BstV2I GAAGAC 1 cut(s) 300
BstX2I RGATCY 1 cut(s) 889
BstYI RGATCY 1 cut(s) 889
BsuRI GGCC 3 cut(s) 248, 1080, 1117
BtgI CCRYGG 1 cut(s) 1404
BtsCI GGATG 7 cut(s) 326, 383, 424, 647, 959, 1192, 1388
BtsIMutI CAGTG 5 cut(s) 540, 590, 872, 1141, 1280
Cac8I GCNNGC 3 cut(s) 11, 246, 1248
CaiI CAGNNNCTG 1 cut(s) 767
CciI TCATGA 1 cut(s) 334
Cfr10I RCCGGY 1 cut(s) 1036
Cfr13I GGNCC 2 cut(s) 473, 819
Csp6I GTAC 4 cut(s) 270, 445, 522, 875
CspCI CAANNNNNGTGG 2 cut(s) 1240, 1275
CviAII CATG 4 cut(s) 335, 369, 1247, 1318
CviQI GTAC 4 cut(s) 270, 445, 522, 875
DdeI CTNAG 5 cut(s) 156, 480, 558, 864, 1374
DpnI GATC 5 cut(s) 46, 414, 423, 891, 1230
DpnII GATC 5 cut(s) 44, 412, 421, 889, 1228
DriI GACNNNNNGTC 1 cut(s) 998
EaeI YGGCCR 1 cut(s) 1078
Eam1104I CTCTTC 4 cut(s) 447, 533, 960, 1284
Eam1105I GACNNNNNGTC 1 cut(s) 998
EarI CTCTTC 4 cut(s) 447, 533, 960, 1284
EciI GGCGGA 1 cut(s) 1012
Eco147I AGGCCT 1 cut(s) 1117
Eco32I GATATC 1 cut(s) 192
Eco47I GGWCC 2 cut(s) 473, 819
Eco57I CTGAAG 4 cut(s) 246, 383, 699, 1052
EcoNI CCTNNNNNAGG 1 cut(s) 504
EcoO109I RGGNCCY 2 cut(s) 473, 819
EcoRII CCWGG 4 cut(s) 688, 760, 1025, 1075
EcoRV GATATC 1 cut(s) 192
Esp3I CGTCTC 1 cut(s) 157
FaeI CATG 4 cut(s) 338, 372, 1250, 1321
FalI AAGNNNNNCTT 2 cut(s) 219, 251
FaqI GGGAC 2 cut(s) 125, 805
FatI CATG 4 cut(s) 334, 368, 1246, 1317
Fnu4HI GCNGC 3 cut(s) 91, 496, 511
FokI GGATG 7 cut(s) 313, 370, 411, 634, 946, 1199, 1375
Fsp4HI GCNGC 3 cut(s) 91, 496, 511
FspBI CTAG 1 cut(s) 492
GluI GCNGC 3 cut(s) 91, 496, 511
GsaI CCCAGC 2 cut(s) 290, 1396
GsuI CTGGAG 4 cut(s) 525, 558, 619, 672
HaeIII GGCC 3 cut(s) 248, 1080, 1117
HapII CCGG 3 cut(s) 553, 664, 1037
Hin1II CATG 4 cut(s) 338, 372, 1250, 1321
HindIII AAGCTT 1 cut(s) 261
HinfI GANTC 8 cut(s) 34, 344, 527, 541, 813, 926, 1010, 1197
HpaII CCGG 3 cut(s) 553, 664, 1037
HphI GGTGA 4 cut(s) 137, 926, 1164, 1249
Hpy166II GTNNAC 3 cut(s) 232, 853, 1111
Hpy188I TCNGA 6 cut(s) 481, 652, 745, 964, 1233, 1288
Hpy8I GTNNAC 3 cut(s) 232, 853, 1111
HpyAV CCTTC 5 cut(s) 245, 486, 510, 723, 1228
HpyCH4III ACNGT 4 cut(s) 203, 535, 769, 1284
HpyCH4V TGCA 9 cut(s) 42, 232, 244, 588, 754, 779, 841, 950, 1381
HpyF10VI GCNNNNNNNGC 3 cut(s) 19, 132, 612
HpyF3I CTNAG 5 cut(s) 156, 480, 558, 864, 1374
Hsp92II CATG 4 cut(s) 338, 372, 1250, 1321
KpnI GGTACC 1 cut(s) 273
Kzo9I GATC 5 cut(s) 44, 412, 421, 889, 1228
LmnI GCTCC 2 cut(s) 378, 591
Lsp1109I GCAGC 3 cut(s) 77, 507, 522
LweI GCATC 2 cut(s) 741, 867
MaeI CTAG 1 cut(s) 492
MaeIII GTNAC 3 cut(s) 167, 1039, 1358
MalI GATC 5 cut(s) 46, 414, 423, 891, 1230
MbiI CCGCTC 1 cut(s) 135
MboI GATC 5 cut(s) 44, 412, 421, 889, 1228
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 1 cut(s) 234
MlsI TGGCCA 1 cut(s) 1080
MluCI AATT 5 cut(s) 294, 359, 628, 655, 1204
MluNI TGGCCA 1 cut(s) 1080
MlyI GAGTC 1 cut(s) 550
MmeI TCCRAC 3 cut(s) 390, 749, 1251
Mox20I TGGCCA 1 cut(s) 1080
MroXI GAANNNNTTC 1 cut(s) 466
MscI TGGCCA 1 cut(s) 1080
MseI TTAA 3 cut(s) 258, 317, 933
MslI CAYNNNNRTG 4 cut(s) 912, 1146, 1164, 1177
Msp20I TGGCCA 1 cut(s) 1080
MspA1I CMGCKG 3 cut(s) 224, 290, 513
MspI CCGG 3 cut(s) 553, 664, 1037
MspR9I CCNGG 4 cut(s) 690, 762, 1027, 1077
Mva1269I GAATGC 1 cut(s) 617
MvaI CCWGG 4 cut(s) 690, 762, 1027, 1077
MwoI GCNNNNNNNGC 3 cut(s) 19, 132, 612
NdeII GATC 5 cut(s) 44, 412, 421, 889, 1228
NlaIII CATG 4 cut(s) 338, 372, 1250, 1321
NlaIV GGNNCC 3 cut(s) 271, 374, 821
NmuCI GTSAC 1 cut(s) 1358
NspI RCATGY 1 cut(s) 1250
OliI CACNNNNGTG 1 cut(s) 1177
PaeI GCATGC 1 cut(s) 1250
PagI TCATGA 1 cut(s) 334
PceI AGGCCT 1 cut(s) 1117
PctI GAATGC 1 cut(s) 617
PdmI GAANNNNTTC 1 cut(s) 466
PfeI GAWTC 7 cut(s) 34, 344, 527, 813, 926, 1010, 1197
PflMI CCANNNNNTGG 1 cut(s) 1182
PfoI TCCNGGA 1 cut(s) 688
PkrI GCNGC 3 cut(s) 92, 497, 512
PleI GAGTC 1 cut(s) 549
PpsI GAGTC 1 cut(s) 549
PpuMI RGGWCCY 2 cut(s) 473, 819
PshAI GACNNNNGTC 1 cut(s) 182
PsiI TTATAA 1 cut(s) 660
Psp5II RGGWCCY 2 cut(s) 473, 819
Psp6I CCWGG 4 cut(s) 688, 760, 1025, 1075
PspFI CCCAGC 2 cut(s) 286, 1392
PspGI CCWGG 4 cut(s) 688, 760, 1025, 1075
PspN4I GGNNCC 3 cut(s) 271, 374, 821
PspPI GGNCC 2 cut(s) 473, 819
PspPPI RGGWCCY 2 cut(s) 473, 819
PstI CTGCAG 1 cut(s) 246
PstNI CAGNNNCTG 1 cut(s) 767
PsuI RGATCY 1 cut(s) 889
PvuII CAGCTG 2 cut(s) 224, 290
RsaI GTAC 4 cut(s) 271, 446, 523, 876
RsaNI GTAC 4 cut(s) 270, 445, 522, 875
RseI CAYNNNNRTG 4 cut(s) 912, 1146, 1164, 1177
SaqAI TTAA 3 cut(s) 258, 317, 933
SatI GCNGC 3 cut(s) 91, 496, 511
Sau3AI GATC 5 cut(s) 44, 412, 421, 889, 1228
Sau96I GGNCC 2 cut(s) 473, 819
SchI GAGTC 1 cut(s) 550
ScrFI CCNGG 4 cut(s) 690, 762, 1027, 1077
SduI GDGCHC 1 cut(s) 234
SfaNI GCATC 2 cut(s) 741, 867
SfcI CTRYAG 2 cut(s) 242, 531
SinI GGWCC 2 cut(s) 473, 819
SmiMI CAYNNNNRTG 4 cut(s) 912, 1146, 1164, 1177
SmlI CTYRAG 1 cut(s) 1044
SmoI CTYRAG 1 cut(s) 1044
SphI GCATGC 1 cut(s) 1250
Sse9I AATT 5 cut(s) 294, 359, 628, 655, 1204
SseBI AGGCCT 1 cut(s) 1117
SsiI CCGC 4 cut(s) 133, 278, 513, 1023
SspI AATATT 1 cut(s) 565
SspMI CTAG 1 cut(s) 492
StuI AGGCCT 1 cut(s) 1117
StyD4I CCNGG 4 cut(s) 688, 760, 1025, 1075
TaaI ACNGT 4 cut(s) 203, 535, 769, 1284
TaqI TCGA 2 cut(s) 71, 77
TasI AATT 5 cut(s) 294, 359, 628, 655, 1204
TatI WGTACW 2 cut(s) 444, 874
TfiI GAWTC 7 cut(s) 34, 344, 527, 813, 926, 1010, 1197
Tru1I TTAA 3 cut(s) 258, 317, 933
Tru9I TTAA 3 cut(s) 258, 317, 933
TscAI CASTG 5 cut(s) 540, 590, 872, 1148, 1287
TseFI GTSAC 1 cut(s) 1358
TseI GCWGC 3 cut(s) 90, 495, 510
Tsp45I GTSAC 1 cut(s) 1358
TspDTI ATGAA 9 cut(s) 455, 465, 636, 1164, 1170, 1288, 1368, 1377, 1401
TspGWI ACGGA 4 cut(s) 194, 1209, 1245, 1393
TspRI CASTG 5 cut(s) 540, 590, 872, 1148, 1287
Van91I CCANNNNNTGG 1 cut(s) 1182
VneI GTGCAC 1 cut(s) 230
VpaK11BI GGWCC 2 cut(s) 473, 819
XagI CCTNNNNNAGG 1 cut(s) 504
XapI RAATTY 4 cut(s) 294, 359, 628, 1204
XceI RCATGY 1 cut(s) 1250
XmnI GAANNNNTTC 1 cut(s) 466
XspI CTAG 1 cut(s) 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.