Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002481

Physical Location & Seq

Genomic Coordinates Reverse (-)

42184153 .. 42187159

Gene Structure 3007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGAAGGCCATGCCCCTACCCTTTGAGGAGTTTCAAGGGAAGGGGGTGTTAGATTTCTCATCTGATTCTTCAGATTTGTTAGCTTCACCAGCACCACAGGGCCACCATCAGCAACCTCAAAAGTGGAAGGAGAATTGCTATGTGGGCAGCACTGAGCCCACTTCTGTTCTCGATACCAGAAGAAGCCCAAGCCCTCCTACATCCTCTTCAACTCTGTCTTCTTCTCACGGCAGCGGCGGTGGAAGTGGGTCTACAGATACCACCCCTACCACCGGCGTGGCGGCTGCGGCTCCGGCAGAAAACAAGCCATCTGAAGCAGGTCTAGAAGAAGCAAAATGTGGACCACCACTTGGAATGGAGGACTGGGAGAGTGTGCTGTCTGAGTCACCAGGTCAAGAGCAGTCCATTCTTAAGTTGATGATGAGTGACATTGAAGACCCATCTCTTGGATTGAACAAGCTGTTGCAGAGTGGGGTTGGTTCTCATCAAGATTTTGGGTTTCATGATGTGGTGGAGGATCAAGGTTATGGCGCCTTTGAAGAACACAATACAGGGAGTTCACTACCTCCTGGTTTGTTCCAACAGCAACAACAATTGGTTGAGCCTTTGGATGAGAAGCCACAAATTTTCAATCCACATATGGTGATGAATCAAAACCAAGCTCAGTTTAATCAAAATCCTGCGATGTTTATGCCACTCTCGTATTCCCAATTGCAAGACCACCACTTCCTTTCCCCACCTCCGGCAAAAAGGCATAATTCCGGTGGCTTTGGACCCAGTTACCCGGGCCAGAGATTGCCGTTTTTGAATCCGGGTCAAGAGCTAATGGCTCGGGTACAACAGCAGCAGCAGCAACAACATCAGCAGCAACAACAACATCAGCAGCAGCAGCTTCTGTTGCTTCCACAACATCTCCAACACAGGCCAGTAATGTTAGCCGCGAAGGACAAAATGGTGAACAATCTGGAAGGGGATAAAGAATTGATGAACAACCACCAGCTTCATCAAGCGATAGTTGACCAGCTTGTCAATGCAGCAGAGCTGATCGAAACAGGCAATCCGTTACTCGCGCAAGGGATATTGGCGCGGCTCAATCAACAGCTCTCTCCTATTGGTAAGCCTTTTCAAAGGGCTGCTTTTTATTTCAAGGAGGCCTTGGAATTACTACTTAACATGAACAACTCTCACTCTTCTGCTAATTTGTCACCTTTTAGCCTCATTTACAAGATTGCTGCATATAAATCATTCTCTGAAATCTCACCAGTTCTCCAATTTGCCAACTTTACTTGCAACCAAGCCATCCTTGAATCTGTGGAAGGCTTTAATCGTGTCCATGTTATCGATTTTGATATTGGCTATGGTGGGCAATGGGCTTCTTTTATGCAAGAGGTGGCTTTAAGAAATGGTGGTTCGCCTCCTTCTCTCAAAATCACTGCATTTGTATGCTCTTCGATGCACGATGAATTCGAGCTGGCTTTCACTCAAGAAAACCTCAAGAACTTTGCTTGTGAGCTCAATTTGGCATTTGAACTCGAAATTGTAAGTATTGAGGCATTGAACTCTGGTTCTTGGCCATTACCACTTCATGGCTCAGAGGGTGTGGCAGTTGCTGTCAATCTTCCAATTGCTTCCTTCTTGAATTCCCGTTTATCGCTTCCTTTGGTCCTGCGCTTTGTTAAGCAGCTTTCTCCCAAAATTGTGGTATCCTTGGAAAGGGGCGGCAGTGACCGGGCTGATATCCCATTTCCCCACCAAATCATTCAAGCCGTTCACTGTTACTCAAGCCTTCTTGAATCATTAGATGCTGTAAATGCAAATCTAGATGCCCTGCAAAAGATTGAGCGGTACTTGCTCCAACCAAGCATTGAAAAGATTGTAATGGGCTGCCATCTTTCTCCTAAAAGGACACCGACACCTTCTTGGAGGACTCTGTTTTTGTCATCTGGGTTCTCCCCGGTGACATTCAGCAATTTCACCGAGTCCCAAGCGGATTGCTTGGTGCAACGGACTCCAGTTGGGGGTTTCCATGTTGAGAAGAGACAGTCTTCGCTTGTGCTCTGCTGGCAGCGGAAGGATCTCATCTCAGCCTCAGGGTGGCGGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007623 GO:0008150 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0021700 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048511 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071840 GO:0080090 GO:0080147 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

701

Amino Acids

77.21

Weight (kDa)

5.57

Isoelectric Point (pI)

59.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	339 - 700	9.5e-94	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00150
fragaria_vesca	FvH4_5g00020 FvH4_5g00020 FvH4_7g11120
malus_domestica	MD00G1043300.v1.1 MD02G1210200.v1.1 MD04G1088100.v1.1 MD07G1115800.v1.1
prunus_persica	Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.5G072300_v2.0.a1 Prupe.5G072300_v2.0.a1
pyrus_communis	pycom02g17200 pycom06g05130 pycom07g10860
rosa_chinensis	RchiOBHm_Chr1g0349141 RchiOBHm_Chr7g0202931
rosa_laevigata	RLG00000003564 RLG00000028602
rosa_multiflora	Rmu_co8366677.1_g000001 Rmu_co8449587.1_g000001 Rmu_sc0008159.1_g000016 Rmu_ssc0000150.1_g000020
rosa_roxburghii	Rroxscaffold_3G00254180 Rroxscaffold_4G00306070
rosa_rugosa	Rorug01G0200700 Rorug07G0074000
rosa_samantha	Rh1AG218400 Rh1BG183800 Rh1CG202900 Rh1DG213600 Rh7AG201800 Rh7BG202000 Rh7CG213100 Rh7DG208800
rosa_wichuraiana	Rw1G018550 Rw7G017640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1025
Acc36I	ACCTGC	1 cut(s)	308
AccB1I	GGYRCC	1 cut(s)	530
AccB7I	CCANNNNNTGG	3 cut(s)	350, 446, 1586
AccBSI	CCGCTC	1 cut(s)	1843
AccI	GTMKAC	1 cut(s)	251
AccII	CGCG	3 cut(s)	941, 1070, 1087
AclWI	GGATC	2 cut(s)	525, 2082
AcoI	YGGCCR	1 cut(s)	1571
AcsI	RAATTY	3 cut(s)	624, 1463, 1639
AcuI	CTGAAG	2 cut(s)	54, 333
AcyI	GRCGYC	1 cut(s)	531
AfaI	GTAC	2 cut(s)	837, 1847
AfiI	CCNNNNNNNGG	8 cut(s)	272, 350, 446, 742, 1586, 1713, 2018, 2094
AflII	CTTAAG	1 cut(s)	410
AjnI	CCWGG	2 cut(s)	388, 568
AleI	CACNNNNGTG	1 cut(s)	275
Alw21I	GWGCWC	2 cut(s)	1515, 2058
Alw26I	GTCTC	1 cut(s)	2032
AlwI	GGATC	2 cut(s)	525, 2082
AlwNI	CAGNNNCTG	2 cut(s)	895, 1610
Ama87I	CYCGRG	2 cut(s)	784, 831
AoxI	GGCC	6 cut(s)	6, 100, 787, 923, 1152, 1571
ApoI	RAATTY	3 cut(s)	624, 1463, 1639
ArsI	GACNNNNNNTTYG	2 cut(s)	1918, 1950
AspLEI	GCGC	4 cut(s)	533, 1072, 1087, 1671
AspS9I	GGNCC	5 cut(s)	100, 341, 773, 787, 1663
AsuC2I	CCSGG	5 cut(s)	785, 786, 813, 1730, 1955
AsuHPI	GGTGA	8 cut(s)	78, 378, 655, 967, 1197, 1251, 1966, 1969
AvaI	CYCGRG	2 cut(s)	784, 831
AvaII	GGWCC	3 cut(s)	341, 773, 1663
AxyI	CCTNAGG	1 cut(s)	2089
BalI	TGGCCA	1 cut(s)	1573
BanI	GGYRCC	1 cut(s)	530
BanII	GRGCYC	2 cut(s)	159, 1515
BarI	GAAGNNNNNNTAC	2 cut(s)	235, 267
BbsI	GAAGAC	3 cut(s)	210, 441, 2037
Bbv12I	GWGCWC	2 cut(s)	1515, 2058
BccI	CCATC	5 cut(s)	114, 316, 448, 1307, 1896
BceAI	ACGGC	3 cut(s)	244, 784, 1751
BcgI	CGANNNNNNTGC	2 cut(s)	673, 707
BciT130I	CCWGG	2 cut(s)	390, 570
BciVI	GTATCC	1 cut(s)	1714
BcnI	CCSGG	5 cut(s)	785, 786, 813, 1730, 1955
BcoDI	GTCTC	1 cut(s)	2032
BfaI	CTAG	2 cut(s)	323, 1820
BfmI	CTRYAG	1 cut(s)	252
BfoI	RGCGCY	1 cut(s)	534
BfrI	CTTAAG	1 cut(s)	410
BfuAI	ACCTGC	1 cut(s)	308
BfuI	GTATCC	1 cut(s)	1714
Bme1390I	CCNGG	7 cut(s)	390, 570, 785, 786, 813, 1730, 1955
Bme18I	GGWCC	3 cut(s)	341, 773, 1663
BmeT110I	CYCGRG	2 cut(s)	784, 831
BmgT120I	GGNCC	5 cut(s)	100, 341, 773, 787, 1663
BmiI	GGNNCC	3 cut(s)	291, 532, 775
BmrFI	CCNGG	7 cut(s)	390, 570, 785, 786, 813, 1730, 1955
BmrI	ACTGGG	2 cut(s)	373, 771
BmsI	GCATC	3 cut(s)	1443, 1792, 1813
BmuI	ACTGGG	2 cut(s)	373, 771
BpiI	GAAGAC	3 cut(s)	210, 441, 2037
BpmI	CTGGAG	1 cut(s)	1995
BpuEI	CTTGAG	3 cut(s)	1467, 1478, 1765
BpuMI	CCSGG	5 cut(s)	785, 786, 813, 1730, 1955
Bsa29I	ATCGAT	1 cut(s)	1341
BsaHI	GRCGYC	1 cut(s)	531
BsaJI	CCNNGG	4 cut(s)	784, 1155, 1707, 1953
BsaWI	WCCGGW	1 cut(s)	761
BsaXI	ACNNNNNCTCC	4 cut(s)	897, 927, 1251, 1281
Bsc4I	CCNNNNNNNGG	8 cut(s)	272, 350, 446, 742, 1586, 1713, 2018, 2094
Bse118I	RCCGGY	1 cut(s)	272
Bse1I	ACTGG	5 cut(s)	368, 777, 926, 1262, 2012
Bse21I	CCTNAGG	1 cut(s)	2089
Bse3DI	GCAATG	1 cut(s)	1373
BseBI	CCWGG	2 cut(s)	390, 570
BseCI	ATCGAT	1 cut(s)	1341
BseDI	CCNNGG	4 cut(s)	784, 1155, 1707, 1953
BseGI	GGATG	3 cut(s)	200, 616, 1299
BseLI	CCNNNNNNNGG	8 cut(s)	272, 350, 446, 742, 1586, 1713, 2018, 2094
BseMI	GCAATG	1 cut(s)	1373
BseMII	CTCAG	6 cut(s)	144, 372, 677, 1605, 2097, 2103
BseNI	ACTGG	5 cut(s)	368, 777, 926, 1262, 2012
BseRI	GAGGAG	1 cut(s)	41
Bsh1236I	CGCG	3 cut(s)	941, 1070, 1087
BshFI	GGCC	6 cut(s)	8, 102, 789, 925, 1154, 1573
BshNI	GGYRCC	1 cut(s)	530
BshVI	ATCGAT	1 cut(s)	1341
BsiHKAI	GWGCWC	2 cut(s)	1515, 2058
BsiHKCI	CYCGRG	2 cut(s)	784, 831
BsiSI	CCGG	8 cut(s)	273, 293, 743, 762, 785, 812, 1729, 1955
BslFI	GGGAC	1 cut(s)	1966
BslI	CCNNNNNNNGG	8 cut(s)	272, 350, 446, 742, 1586, 1713, 2018, 2094
BsmAI	GTCTC	1 cut(s)	2032
BsmFI	GGGAC	1 cut(s)	1966
BsnI	GGCC	6 cut(s)	8, 102, 789, 925, 1154, 1573
BsoBI	CYCGRG	2 cut(s)	784, 831
Bsp1286I	GDGCHC	3 cut(s)	159, 1515, 2058
Bsp143I	GATC	3 cut(s)	517, 1044, 2074
BspANI	GGCC	6 cut(s)	8, 102, 789, 925, 1154, 1573
BspCNI	CTCAG	6 cut(s)	145, 373, 676, 1604, 2096, 2102
BspDI	ATCGAT	1 cut(s)	1341
BspFNI	CGCG	3 cut(s)	941, 1070, 1087
BspHI	TCATGA	1 cut(s)	502
BspLI	GGNNCC	3 cut(s)	291, 532, 775
BspMI	ACCTGC	1 cut(s)	308
BspPI	GGATC	2 cut(s)	525, 2082
BspQI	GCTCTTC	1 cut(s)	1453
BspT107I	GGYRCC	1 cut(s)	530
BspTI	CTTAAG	1 cut(s)	410
BsrBI	CCGCTC	1 cut(s)	1843
BsrDI	GCAATG	1 cut(s)	1373
BsrFI	RCCGGY	1 cut(s)	272
BsrI	ACTGG	5 cut(s)	368, 777, 926, 1262, 2012
BssAI	RCCGGY	1 cut(s)	272
BssECI	CCNNGG	4 cut(s)	784, 1155, 1707, 1953
BssMI	GATC	3 cut(s)	517, 1044, 2074
BssNI	GRCGYC	1 cut(s)	531
BssT1I	CCWWGG	2 cut(s)	1155, 1707
Bst2UI	CCWGG	2 cut(s)	390, 570
Bst4CI	ACNGT	2 cut(s)	1775, 2043
Bst6I	CTCTTC	4 cut(s)	211, 1195, 1453, 2030
BstACI	GRCGYC	1 cut(s)	531
BstAFI	CTTAAG	1 cut(s)	410
BstC8I	GCNNGC	2 cut(s)	1473, 2063
BstDEI	CTNAG	6 cut(s)	153, 381, 663, 1591, 2083, 2089
BstENI	CCTNNNNNAGG	1 cut(s)	1711
BstF5I	GGATG	3 cut(s)	200, 616, 1299
BstFNI	CGCG	3 cut(s)	941, 1070, 1087
BstH2I	RGCGCY	1 cut(s)	534
BstHHI	GCGC	4 cut(s)	533, 1072, 1087, 1671
BstKTI	GATC	3 cut(s)	520, 1047, 2077
BstMAI	GTCTC	1 cut(s)	2032
BstMBI	GATC	3 cut(s)	517, 1044, 2074
BstNI	CCWGG	2 cut(s)	390, 570
BstSCI	CCNGG	7 cut(s)	388, 568, 783, 784, 811, 1728, 1953
BstSFI	CTRYAG	1 cut(s)	252
BstUI	CGCG	3 cut(s)	941, 1070, 1087
BstV2I	GAAGAC	3 cut(s)	210, 441, 2037
BstX2I	RGATCY	1 cut(s)	2074
BstXI	CCANNNNNNTGG	2 cut(s)	277, 1699
BstYI	RGATCY	1 cut(s)	2074
Bsu15I	ATCGAT	1 cut(s)	1341
Bsu36I	CCTNAGG	1 cut(s)	2089
BsuI	GTATCC	1 cut(s)	1714
BsuRI	GGCC	6 cut(s)	8, 102, 789, 925, 1154, 1573
BsuTUI	ATCGAT	1 cut(s)	1341
BtgZI	GCGATG	1 cut(s)	698
BtsCI	GGATG	3 cut(s)	200, 616, 1299
BtsI	GCAGTG	2 cut(s)	1431, 1729
BtsIMutI	CAGTG	4 cut(s)	150, 1431, 1729, 1771
BveI	ACCTGC	1 cut(s)	308
Cac8I	GCNNGC	2 cut(s)	1473, 2063
CaiI	CAGNNNCTG	2 cut(s)	895, 1610
CciI	TCATGA	1 cut(s)	502
CfoI	GCGC	4 cut(s)	533, 1072, 1087, 1671
Cfr10I	RCCGGY	1 cut(s)	272
Cfr13I	GGNCC	5 cut(s)	100, 341, 773, 787, 1663
Cfr9I	CCCGGG	1 cut(s)	784
ClaI	ATCGAT	1 cut(s)	1341
CsiI	ACCWGGT	1 cut(s)	388
Csp6I	GTAC	2 cut(s)	836, 1846
CviAII	CATG	6 cut(s)	10, 503, 1174, 1334, 1586, 2027
CviQI	GTAC	2 cut(s)	836, 1846
DdeI	CTNAG	6 cut(s)	153, 381, 663, 1591, 2083, 2089
DinI	GGCGCC	1 cut(s)	532
DpnI	GATC	3 cut(s)	519, 1046, 2076
DpnII	GATC	3 cut(s)	517, 1044, 2074
DrdI	GACNNNNNNGTC	1 cut(s)	1025
DseDI	GACNNNNNNGTC	1 cut(s)	1025
EaeI	YGGCCR	1 cut(s)	1571
Eam1104I	CTCTTC	4 cut(s)	211, 1195, 1453, 2030
EarI	CTCTTC	4 cut(s)	211, 1195, 1453, 2030
Ecl136II	GAGCTC	1 cut(s)	1513
Eco130I	CCWWGG	2 cut(s)	1155, 1707
Eco147I	AGGCCT	1 cut(s)	1154
Eco24I	GRGCYC	2 cut(s)	159, 1515
Eco32I	GATATC	1 cut(s)	1738
Eco47I	GGWCC	3 cut(s)	341, 773, 1663
Eco53kI	GAGCTC	1 cut(s)	1513
Eco57I	CTGAAG	2 cut(s)	54, 333
Eco81I	CCTNAGG	1 cut(s)	2089
Eco88I	CYCGRG	2 cut(s)	784, 831
EcoICRI	GAGCTC	1 cut(s)	1513
EcoNI	CCTNNNNNAGG	1 cut(s)	1711
EcoRI	GAATTC	2 cut(s)	1463, 1639
EcoRII	CCWGG	2 cut(s)	388, 568
EcoRV	GATATC	1 cut(s)	1738
EcoT14I	CCWWGG	2 cut(s)	1155, 1707
EcoT38I	GRGCYC	2 cut(s)	159, 1515
EgeI	GGCGCC	1 cut(s)	532
EheI	GGCGCC	1 cut(s)	532
ErhI	CCWWGG	2 cut(s)	1155, 1707
FaeI	CATG	6 cut(s)	13, 506, 1177, 1337, 1589, 2030
FalI	AAGNNNNNCTT	6 cut(s)	1120, 1152, 1139, 1171, 1287, 1319
FaqI	GGGAC	1 cut(s)	1966
FatI	CATG	6 cut(s)	9, 502, 1173, 1333, 1585, 2026
FauNDI	CATATG	1 cut(s)	639
FblI	GTMKAC	1 cut(s)	251
FokI	GGATG	3 cut(s)	187, 623, 1286
FriOI	GRGCYC	2 cut(s)	159, 1515
FspBI	CTAG	2 cut(s)	323, 1820
GlaI	GCGC	4 cut(s)	532, 1071, 1086, 1670
GsuI	CTGGAG	1 cut(s)	1995
HaeII	RGCGCY	1 cut(s)	534
HaeIII	GGCC	6 cut(s)	8, 102, 789, 925, 1154, 1573
HapII	CCGG	8 cut(s)	273, 293, 743, 762, 785, 812, 1729, 1955
HhaI	GCGC	4 cut(s)	533, 1072, 1087, 1671
Hin1I	GRCGYC	1 cut(s)	531
Hin1II	CATG	6 cut(s)	13, 506, 1177, 1337, 1589, 2030
Hin6I	GCGC	4 cut(s)	531, 1070, 1085, 1669
HinP1I	GCGC	4 cut(s)	531, 1070, 1085, 1669
HincII	GTYRAC	1 cut(s)	1018
HindII	GTYRAC	1 cut(s)	1018
HinfI	GANTC	9 cut(s)	65, 383, 649, 808, 1307, 1793, 1927, 1979, 2008
HpaII	CCGG	8 cut(s)	273, 293, 743, 762, 785, 812, 1729, 1955
HphI	GGTGA	8 cut(s)	78, 378, 655, 967, 1197, 1251, 1966, 1969
Hpy166II	GTNNAC	6 cut(s)	252, 341, 560, 958, 1018, 1771
Hpy188I	TCNGA	6 cut(s)	64, 73, 313, 382, 1252, 1594
Hpy8I	GTNNAC	6 cut(s)	252, 341, 560, 958, 1018, 1771
HpyCH4III	ACNGT	2 cut(s)	1775, 2043
HpyF3I	CTNAG	6 cut(s)	153, 381, 663, 1591, 2083, 2089
Hsp92I	GRCGYC	1 cut(s)	531
Hsp92II	CATG	6 cut(s)	13, 506, 1177, 1337, 1589, 2030
HspAI	GCGC	4 cut(s)	531, 1070, 1085, 1669
KasI	GGCGCC	1 cut(s)	530
Kzo9I	GATC	3 cut(s)	517, 1044, 2074
LguI	GCTCTTC	1 cut(s)	1453
LmnI	GCTCC	2 cut(s)	295, 1857
LweI	GCATC	3 cut(s)	1443, 1792, 1813
MabI	ACCWGGT	1 cut(s)	388
MaeI	CTAG	2 cut(s)	323, 1820
MaeIII	GTNAC	8 cut(s)	384, 425, 779, 1062, 1203, 1724, 1775, 1957
MalI	GATC	3 cut(s)	519, 1046, 2076
MbiI	CCGCTC	1 cut(s)	1843
MboI	GATC	3 cut(s)	517, 1044, 2074
MfeI	CAATTG	3 cut(s)	593, 710, 1623
MflI	RGATCY	1 cut(s)	2074
MhlI	GDGCHC	3 cut(s)	159, 1515, 2058
MlsI	TGGCCA	1 cut(s)	1573
MluNI	TGGCCA	1 cut(s)	1573
Mly113I	GGCGCC	1 cut(s)	531
MlyI	GAGTC	4 cut(s)	392, 1921, 1988, 2002
MmeI	TCCRAC	3 cut(s)	604, 940, 1879
Mox20I	TGGCCA	1 cut(s)	1573
MscI	TGGCCA	1 cut(s)	1573
MseI	TTAA	6 cut(s)	411, 669, 1170, 1323, 1397, 1677
MslI	CAYNNNNRTG	2 cut(s)	275, 1441
Msp20I	TGGCCA	1 cut(s)	1573
MspA1I	CMGCKG	2 cut(s)	234, 2068
MspCI	CTTAAG	1 cut(s)	410
MspI	CCGG	8 cut(s)	273, 293, 743, 762, 785, 812, 1729, 1955
MspR9I	CCNGG	7 cut(s)	390, 570, 785, 786, 813, 1730, 1955
MunI	CAATTG	3 cut(s)	593, 710, 1623
MvaI	CCWGG	2 cut(s)	390, 570
MvnI	CGCG	3 cut(s)	941, 1070, 1087
NarI	GGCGCC	1 cut(s)	531
NciI	CCSGG	5 cut(s)	785, 786, 813, 1730, 1955
NdeI	CATATG	1 cut(s)	639
NdeII	GATC	3 cut(s)	517, 1044, 2074
NlaIII	CATG	6 cut(s)	13, 506, 1177, 1337, 1589, 2030
NlaIV	GGNNCC	3 cut(s)	291, 532, 775
NmuCI	GTSAC	5 cut(s)	384, 425, 1203, 1724, 1957
OliI	CACNNNNGTG	1 cut(s)	275
PagI	TCATGA	1 cut(s)	502
PceI	AGGCCT	1 cut(s)	1154
PciSI	GCTCTTC	1 cut(s)	1453
PcsI	WCGNNNNNNNCGW	1 cut(s)	1464
PfeI	GAWTC	5 cut(s)	65, 649, 808, 1307, 1793
PflMI	CCANNNNNTGG	3 cut(s)	350, 446, 1586
PleI	GAGTC	4 cut(s)	391, 1921, 1987, 2002
PluTI	GGCGCC	1 cut(s)	534
PpsI	GAGTC	4 cut(s)	391, 1921, 1987, 2002
Psp124BI	GAGCTC	1 cut(s)	1515
Psp6I	CCWGG	2 cut(s)	388, 568
PspGI	CCWGG	2 cut(s)	388, 568
PspN4I	GGNNCC	3 cut(s)	291, 532, 775
PspPI	GGNCC	5 cut(s)	100, 341, 773, 787, 1663
PstNI	CAGNNNCTG	2 cut(s)	895, 1610
PsuI	RGATCY	1 cut(s)	2074
RsaI	GTAC	2 cut(s)	837, 1847
RsaNI	GTAC	2 cut(s)	836, 1846
RseI	CAYNNNNRTG	2 cut(s)	275, 1441
SacI	GAGCTC	1 cut(s)	1515
SapI	GCTCTTC	1 cut(s)	1453
SaqAI	TTAA	6 cut(s)	411, 669, 1170, 1323, 1397, 1677
Sau3AI	GATC	3 cut(s)	517, 1044, 2074
Sau96I	GGNCC	5 cut(s)	100, 341, 773, 787, 1663
SchI	GAGTC	4 cut(s)	392, 1921, 1988, 2002
ScrFI	CCNGG	7 cut(s)	390, 570, 785, 786, 813, 1730, 1955
SduI	GDGCHC	3 cut(s)	159, 1515, 2058
SexAI	ACCWGGT	1 cut(s)	388
SfaNI	GCATC	3 cut(s)	1443, 1792, 1813
SfcI	CTRYAG	1 cut(s)	252
SfoI	GGCGCC	1 cut(s)	532
SgrAI	CRCCGGYG	1 cut(s)	272
SinI	GGWCC	3 cut(s)	341, 773, 1663
SmaI	CCCGGG	1 cut(s)	786
SmiMI	CAYNNNNRTG	2 cut(s)	275, 1441
SmlI	CTYRAG	4 cut(s)	410, 1482, 1493, 1780
SmoI	CTYRAG	4 cut(s)	410, 1482, 1493, 1780
SseBI	AGGCCT	1 cut(s)	1154
SspDI	GGCGCC	1 cut(s)	530
SspMI	CTAG	2 cut(s)	323, 1820
SstI	GAGCTC	1 cut(s)	1515
StuI	AGGCCT	1 cut(s)	1154
StyD4I	CCNGG	7 cut(s)	388, 568, 783, 784, 811, 1728, 1953
StyI	CCWWGG	2 cut(s)	1155, 1707
TaaI	ACNGT	2 cut(s)	1775, 2043
TaqI	TCGA	6 cut(s)	171, 1047, 1341, 1451, 1467, 1533
TauI	GCSGC	6 cut(s)	237, 284, 290, 941, 1090, 1722
TfiI	GAWTC	5 cut(s)	65, 649, 808, 1307, 1793
Tru1I	TTAA	6 cut(s)	411, 669, 1170, 1323, 1397, 1677
Tru9I	TTAA	6 cut(s)	411, 669, 1170, 1323, 1397, 1677
TscAI	CASTG	4 cut(s)	157, 1438, 1729, 1778
TseFI	GTSAC	5 cut(s)	384, 425, 1203, 1724, 1957
Tsp45I	GTSAC	5 cut(s)	384, 425, 1203, 1724, 1957
TspDTI	ATGAA	8 cut(s)	17, 491, 662, 992, 1001, 1190, 1476, 1574
TspGWI	ACGGA	2 cut(s)	1050, 2020
TspMI	CCCGGG	1 cut(s)	784
TspRI	CASTG	4 cut(s)	157, 1438, 1729, 1778
Van91I	CCANNNNNTGG	3 cut(s)	350, 446, 1586
Vha464I	CTTAAG	1 cut(s)	410
VpaK11BI	GGWCC	3 cut(s)	341, 773, 1663
XagI	CCTNNNNNAGG	1 cut(s)	1711
XapI	RAATTY	3 cut(s)	624, 1463, 1639
XbaI	TCTAGA	2 cut(s)	322, 1819
XmaI	CCCGGG	1 cut(s)	784
XmiI	GTMKAC	1 cut(s)	251
XspI	CTAG	2 cut(s)	323, 1820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.