Clathrin assembly protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G35200 AT5G35200 |
| fragaria_vesca | FvH4_1g02540 FvH4_1g02540 FvH4_1g02540 |
| malus_domestica | MD02G1022900.v1.1 MD15G1165600.v1.1 |
| prunus_persica | Prupe.7G249200_v2.0.a1 Prupe.7G249200_v2.0.a1 |
| pyrus_communis | pycom15g14840 |
| rosa_chinensis | RchiOBHm_Chr1g0354531 RchiOBHm_Chr2g0087571 |
| rosa_laevigata | RLG00000015879 |
| rosa_multiflora | Rmu_co7995458.1_g000001 Rmu_sc0002299.1_g000024 Rmu_sc0003071.1_g000007 Rmu_sc0006059.1_g000023 |
| rosa_roxburghii | Rroxscaffold_2G00153460 |
| rosa_rugosa | Rorug01G0476600 Rorug06G0009000 |
| rosa_samantha | Rh2AG030100 Rh2AG444300 Rh2BG030000 Rh2CG030300 Rh2CG431200 Rh2DG030200 Rh2DG503600 Rh4AG121800 |
| rosa_wichuraiana | Rw1G014010 Rw2G002390 Rw5G022520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 194 |
| AcoI | YGGCCR | 1 cut(s) | 90 |
| AcsI | RAATTY | 1 cut(s) | 66 |
| AgsI | TTSAA | 2 cut(s) | 196, 284 |
| AjiI | CACGTC | 1 cut(s) | 128 |
| AluBI | AGCT | 5 cut(s) | 23, 149, 251, 336, 356 |
| AluI | AGCT | 5 cut(s) | 23, 149, 251, 336, 356 |
| Alw26I | GTCTC | 1 cut(s) | 37 |
| AlwI | GGATC | 1 cut(s) | 194 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 266 |
| AoxI | GGCC | 1 cut(s) | 90 |
| ApeKI | GCWGC | 1 cut(s) | 218 |
| ApoI | RAATTY | 1 cut(s) | 66 |
| AsuHPI | GGTGA | 1 cut(s) | 64 |
| BalI | TGGCCA | 1 cut(s) | 92 |
| BbvI | GCAGC | 1 cut(s) | 230 |
| BclI | TGATCA | 1 cut(s) | 268 |
| BcoDI | GTCTC | 1 cut(s) | 37 |
| BfaI | CTAG | 1 cut(s) | 360 |
| BfmI | CTRYAG | 1 cut(s) | 216 |
| BisI | GCNGC | 1 cut(s) | 219 |
| BlsI | GCNGC | 1 cut(s) | 220 |
| BmgBI | CACGTC | 1 cut(s) | 128 |
| BpmI | CTGGAG | 1 cut(s) | 129 |
| BpuEI | CTTGAG | 1 cut(s) | 273 |
| BsaJI | CCNNGG | 2 cut(s) | 78, 240 |
| Bse1I | ACTGG | 3 cut(s) | 155, 260, 372 |
| BseDI | CCNNGG | 2 cut(s) | 78, 240 |
| BseNI | ACTGG | 3 cut(s) | 155, 260, 372 |
| BseXI | GCAGC | 1 cut(s) | 230 |
| BseYI | CCCAGC | 1 cut(s) | 187 |
| BshFI | GGCC | 1 cut(s) | 92 |
| BsmAI | GTCTC | 1 cut(s) | 37 |
| BsmI | GAATGC | 1 cut(s) | 241 |
| BsnI | GGCC | 1 cut(s) | 92 |
| Bsp143I | GATC | 2 cut(s) | 199, 268 |
| Bsp19I | CCATGG | 1 cut(s) | 240 |
| BspANI | GGCC | 1 cut(s) | 92 |
| BspMAI | CTGCAG | 1 cut(s) | 220 |
| BspPI | GGATC | 1 cut(s) | 194 |
| BsrI | ACTGG | 3 cut(s) | 155, 260, 372 |
| BssECI | CCNNGG | 2 cut(s) | 78, 240 |
| BssMI | GATC | 2 cut(s) | 199, 268 |
| BssT1I | CCWWGG | 2 cut(s) | 78, 240 |
| Bst4CI | ACNGT | 2 cut(s) | 280, 387 |
| BstDSI | CCRYGG | 1 cut(s) | 240 |
| BstKTI | GATC | 2 cut(s) | 202, 271 |
| BstMAI | GTCTC | 1 cut(s) | 37 |
| BstMBI | GATC | 2 cut(s) | 199, 268 |
| BstSFI | CTRYAG | 1 cut(s) | 216 |
| BstV1I | GCAGC | 1 cut(s) | 230 |
| BsuRI | GGCC | 1 cut(s) | 92 |
| BtgI | CCRYGG | 1 cut(s) | 240 |
| BtrI | CACGTC | 1 cut(s) | 128 |
| CaiI | CAGNNNCTG | 1 cut(s) | 266 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 165, 200 |
| CviAII | CATG | 1 cut(s) | 241 |
| CviJI | RGCY | 8 cut(s) | 23, 92, 149, 245, 251, 329, 336, 356 |
| CviKI_1 | RGCY | 8 cut(s) | 23, 92, 149, 245, 251, 329, 336, 356 |
| DpnI | GATC | 2 cut(s) | 201, 270 |
| DpnII | GATC | 2 cut(s) | 199, 268 |
| EaeI | YGGCCR | 1 cut(s) | 90 |
| Eco130I | CCWWGG | 2 cut(s) | 78, 240 |
| EcoT14I | CCWWGG | 2 cut(s) | 78, 240 |
| ErhI | CCWWGG | 2 cut(s) | 78, 240 |
| FaeI | CATG | 1 cut(s) | 244 |
| FaiI | YATR | 3 cut(s) | 12, 95, 242 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 71, 103 |
| FatI | CATG | 1 cut(s) | 240 |
| FbaI | TGATCA | 1 cut(s) | 268 |
| Fnu4HI | GCNGC | 1 cut(s) | 219 |
| Fsp4HI | GCNGC | 1 cut(s) | 219 |
| FspBI | CTAG | 1 cut(s) | 360 |
| GluI | GCNGC | 1 cut(s) | 219 |
| GsaI | CCCAGC | 1 cut(s) | 191 |
| GsuI | CTGGAG | 1 cut(s) | 129 |
| HaeIII | GGCC | 1 cut(s) | 92 |
| Hin1II | CATG | 1 cut(s) | 244 |
| HphI | GGTGA | 1 cut(s) | 64 |
| Hpy166II | GTNNAC | 2 cut(s) | 131, 383 |
| Hpy188I | TCNGA | 2 cut(s) | 17, 268 |
| Hpy188III | TCNNGA | 1 cut(s) | 209 |
| Hpy8I | GTNNAC | 2 cut(s) | 131, 383 |
| HpyAV | CCTTC | 1 cut(s) | 144 |
| HpyCH4III | ACNGT | 2 cut(s) | 280, 387 |
| HpyCH4IV | ACGT | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 2 cut(s) | 218, 375 |
| HpySE526I | ACGT | 1 cut(s) | 127 |
| Hsp92II | CATG | 1 cut(s) | 244 |
| Ksp22I | TGATCA | 1 cut(s) | 268 |
| Kzo9I | GATC | 2 cut(s) | 199, 268 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| LpnPI | CCDG | 8 cut(s) | 159, 168, 173, 216, 273, 288, 353, 361 |
| Lsp1109I | GCAGC | 1 cut(s) | 230 |
| MaeI | CTAG | 1 cut(s) | 360 |
| MaeII | ACGT | 1 cut(s) | 127 |
| MaeIII | GTNAC | 1 cut(s) | 322 |
| MalI | GATC | 2 cut(s) | 201, 270 |
| MboI | GATC | 2 cut(s) | 199, 268 |
| MboII | GAAGA | 2 cut(s) | 17, 244 |
| MlsI | TGGCCA | 1 cut(s) | 92 |
| MluCI | AATT | 2 cut(s) | 66, 311 |
| MluNI | TGGCCA | 1 cut(s) | 92 |
| MnlI | CCTC | 5 cut(s) | 43, 91, 115, 153, 297 |
| Mox20I | TGGCCA | 1 cut(s) | 92 |
| MscI | TGGCCA | 1 cut(s) | 92 |
| Msp20I | TGGCCA | 1 cut(s) | 92 |
| Mva1269I | GAATGC | 1 cut(s) | 241 |
| NcoI | CCATGG | 1 cut(s) | 240 |
| NdeII | GATC | 2 cut(s) | 199, 268 |
| NlaIII | CATG | 1 cut(s) | 244 |
| PctI | GAATGC | 1 cut(s) | 241 |
| PkrI | GCNGC | 1 cut(s) | 220 |
| PspFI | CCCAGC | 1 cut(s) | 187 |
| PstI | CTGCAG | 1 cut(s) | 220 |
| PstNI | CAGNNNCTG | 1 cut(s) | 266 |
| SatI | GCNGC | 1 cut(s) | 219 |
| Sau3AI | GATC | 2 cut(s) | 199, 268 |
| SfcI | CTRYAG | 1 cut(s) | 216 |
| SmlI | CTYRAG | 1 cut(s) | 288 |
| SmoI | CTYRAG | 1 cut(s) | 288 |
| Sse9I | AATT | 2 cut(s) | 66, 311 |
| SspMI | CTAG | 1 cut(s) | 360 |
| StyI | CCWWGG | 2 cut(s) | 78, 240 |
| TaaI | ACNGT | 2 cut(s) | 280, 387 |
| TaiI | ACGT | 1 cut(s) | 130 |
| TasI | AATT | 2 cut(s) | 66, 311 |
| TseI | GCWGC | 1 cut(s) | 218 |
| XapI | RAATTY | 1 cut(s) | 66 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 85 |
| XspI | CTAG | 1 cut(s) | 360 |