Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004817

Physical Location & Seq

Genomic Coordinates Forward (+)

1374050 .. 1375585

Gene Structure 1536 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0009000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGATTGCAGGGTTTCAGTGTCGTCGACTTGGAGCTCAAGCTATTGATCTGTTTGTACAAATGCACGTTGATGGACTCGAGTTTGACCGTGCCACACTTCTCAGCGTCTTATCTTCCTTGAATGGAGTAAATGACATTGATGATGTTGTGGTTACTAAGTTTTGTTATCAATTGCATTGTCTGGTTATCAAAACCGGGTTTATATTAGGAATTGAAGTGGTCACTGCACTAGTTAAAGCTTATTCAGATCTTGGAGGGGATGCTGCTGACTGTTACAGGCTCTTCTCTGAGACAAGTTGTCATCGGGATATTGTTGCGTGGACAGGCATTATGACAATATTTTCCGAGCGGGACCCTGAAGAAGCACTCTCCCTTTTTCATCAATTACGCAGGGAGAATTTAGCTCCAGACAGGTATACCTTCTCAATTGTTTTAAAAGCCTATGCAAGCCTTGCAGCCGAGCGCCATGCCTCAGCAGTTCATTCTCAAGTTATTAAAGGTGGGTTTGGGGGTGACACAGTCCTTGCAAACGCCTTGATCCATGCCTATGCTCGGTGTGGCTCCATTTCCTTGTCTAAACAAGTTTTTGATGGAATTGAGTTTCGTGATGTTGTTTCGTGGAACACAATGCTCAAGGCTTATGCCTTGTATGGACAAGCTACAGAGGCACTGCAGCTATTTTCACAAATGGACATCAAACCCGATTCTGCTACCTTTGTTTCTCTCCTCTGTGCTTGTAGCCATGCTGGACTGGTAGCAGAAGGAACCAGAATCTTTGACTCCATGCTTGAGAGATATGGAATTATACCTCTATGTGATCATTATGCCTGCATGGTTGACATTCTTGGTCGAGCTGGACGAGTTGGTGAGGCTGAGATGCTTGTAAGTAGAATACCAATGGAGCCCGATTCTGTAGTTTGGAGTGCACTCCTTGGATCGTGTAGGAAGCATGGAAATACACAGTTGGCCAAGTTAGCAGCTGATAGACTGAAGGAGTTGGCTCCAGAGTATTCATTAGTTTATGTACAAATGTCAAATATATATAGCTCTGATGGTAACTTTGGTGAAGCGGGCCTAATTAGGAAGGAAATGAAAGGGTCTCGAGTGAAAAAGGAACCTGGATTAAGCTGGATTGAGATTGGAAATCAGGTTCATGAGTTCTCCTCTGGAGGCCGACGCCATCCAGAAAGGACTCTTATAAGCAGAAAACTAAAAGAACTGATTGGACGGTTGAGGGAAATTGGTTATGTTCCAGATACAAGCTCATCCTTGCATGATGTGGAAGAGGAGCACAAAGAGGAGCAGCTGTACCATCATAGTGAGAAGCTAGCTTTAGTGTTTGCTATTATGAATGAAAGCAGTTTACATTGTGGTAGGACTGCTATAAAAATAATGAAGAATATCAGAGTATGCGTCGATTGCCATAACTTCATGAAGTTAGCATCAAATCTACTTCAAAAGGATATTGTTGTGAGAGACTCAAACCGCTTCCACCACTTTAAAGATGGCATATGTTCTTGCAATGATTACTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANTH

Protein Analysis

511

Amino Acids

57.0

Weight (kDa)

6.29

Isoelectric Point (pI)

36.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	103 - 149	2.9e-08	PPR repeat family
PPR_2	PF13041	202 - 247	5e-09	PPR repeat family
E_motif	PF20431	317 - 379	6.6e-15	E motif
DYW_deaminase	PF14432	415 - 511	1.4e-36	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004817)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35200 AT5G35200
fragaria_vesca	FvH4_1g02540 FvH4_1g02540 FvH4_1g02540
malus_domestica	MD02G1022900.v1.1 MD15G1165600.v1.1
prunus_persica	Prupe.7G249200_v2.0.a1 Prupe.7G249200_v2.0.a1
pyrus_communis	pycom15g14840
rosa_chinensis	RchiOBHm_Chr1g0354531 RchiOBHm_Chr2g0087571
rosa_laevigata	RLG00000015879
rosa_multiflora	Rmu_co7995458.1_g000001 Rmu_sc0002299.1_g000024 Rmu_sc0003071.1_g000007 Rmu_sc0006059.1_g000023
rosa_roxburghii	Rroxscaffold_2G00153460
rosa_rugosa	Rorug01G0476600 Rorug06G0009000
rosa_samantha	Rh2AG030100 Rh2AG444300 Rh2BG030000 Rh2CG030300 Rh2CG431200 Rh2DG030200 Rh2DG503600 Rh4AG121800
rosa_wichuraiana	Rw1G014010 Rw2G002390 Rw5G022520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1199
AccBSI	CCGCTC	1 cut(s)	349
AccI	GTMKAC	2 cut(s)	25, 416
AciI	CCGC	3 cut(s)	349, 1070, 1486
AclWI	GGATC	2 cut(s)	532, 943
AcoI	YGGCCR	1 cut(s)	966
AcsI	RAATTY	1 cut(s)	397
AcuI	CTGAAG	2 cut(s)	378, 1010
AcyI	GRCGYC	1 cut(s)	1177
AfaI	GTAC	3 cut(s)	57, 1026, 1310
AfiI	CCNNNNNNNGG	1 cut(s)	552
AgsI	TTSAA	3 cut(s)	121, 215, 1457
AhdI	GACNNNNNGTC	1 cut(s)	297
AhlI	ACTAGT	1 cut(s)	229
AjnI	CCWGG	1 cut(s)	1117
AloI	GAACNNNNNNTCC	2 cut(s)	1134, 1166
Alw21I	GWGCWC	3 cut(s)	37, 928, 1293
Alw26I	GTCTC	3 cut(s)	284, 1104, 1470
Alw44I	GTGCAC	1 cut(s)	924
AlwI	GGATC	2 cut(s)	532, 943
Ama87I	CYCGRG	2 cut(s)	77, 1101
AoxI	GGCC	3 cut(s)	966, 1072, 1171
ApaLI	GTGCAC	1 cut(s)	924
ApeKI	GCWGC	5 cut(s)	263, 455, 673, 977, 1303
ApoI	RAATTY	1 cut(s)	397
AspLEI	GCGC	1 cut(s)	465
AspS9I	GGNCC	2 cut(s)	352, 1072
AsuC2I	CCSGG	1 cut(s)	196
AsuHPI	GGTGA	3 cut(s)	524, 878, 1076
AsuNHI	GCTAGC	1 cut(s)	1327
AvaI	CYCGRG	2 cut(s)	77, 1101
AvaII	GGWCC	1 cut(s)	352
BaeGI	GKGCMC	1 cut(s)	928
BalI	TGGCCA	1 cut(s)	968
BanII	GRGCYC	2 cut(s)	37, 906
Bbv12I	GWGCWC	3 cut(s)	37, 928, 1293
BbvCI	CCTCAGC	1 cut(s)	472
BbvI	GCAGC	5 cut(s)	250, 467, 685, 989, 1315
BccI	CCATC	6 cut(s)	65, 584, 1046, 1188, 1320, 1499
BcgI	CGANNNNNNTGC	2 cut(s)	449, 483
BciT130I	CCWGG	1 cut(s)	1119
BclI	TGATCA	1 cut(s)	817
BcnI	CCSGG	1 cut(s)	196
BcoDI	GTCTC	3 cut(s)	284, 1104, 1470
BcuI	ACTAGT	1 cut(s)	229
BfaI	CTAG	2 cut(s)	230, 1328
BfmI	CTRYAG	3 cut(s)	660, 671, 912
BfoI	RGCGCY	1 cut(s)	466
BglII	AGATCT	1 cut(s)	247
BisI	GCNGC	5 cut(s)	264, 456, 674, 978, 1304
BlsI	GCNGC	5 cut(s)	265, 457, 675, 979, 1305
Bme1390I	CCNGG	2 cut(s)	196, 1119
Bme18I	GGWCC	1 cut(s)	352
BmeRI	GACNNNNNGTC	1 cut(s)	297
BmeT110I	CYCGRG	2 cut(s)	77, 1101
BmgT120I	GGNCC	2 cut(s)	352, 1072
BmiI	GGNNCC	7 cut(s)	353, 354, 562, 766, 903, 1002, 1116
BmrFI	CCNGG	2 cut(s)	196, 1119
BmsI	GCATC	3 cut(s)	250, 867, 1451
BmtI	GCTAGC	1 cut(s)	1331
BplI	GAGNNNNNCTC	2 cut(s)	1148, 1180
BpmI	CTGGAG	3 cut(s)	390, 987, 1188
Bpu10I	CCTNAGC	1 cut(s)	472
BpuEI	CTTGAG	4 cut(s)	21, 471, 617, 809
BpuMI	CCSGG	1 cut(s)	196
BsaHI	GRCGYC	1 cut(s)	1177
BsaI	GGTCTC	1 cut(s)	1104
BsaJI	CCNNGG	1 cut(s)	931
BsaXI	ACNNNNNCTCC	2 cut(s)	1292, 1322
Bsc4I	CCNNNNNNNGG	1 cut(s)	552
Bse1I	ACTGG	2 cut(s)	756, 1535
Bse3DI	GCAATG	1 cut(s)	1528
BseBI	CCWGG	1 cut(s)	1119
BseDI	CCNNGG	1 cut(s)	931
BseGI	GGATG	3 cut(s)	265, 1180, 1265
BseLI	CCNNNNNNNGG	1 cut(s)	552
BseMI	GCAATG	1 cut(s)	1528
BseMII	CTCAG	4 cut(s)	115, 279, 486, 864
BseNI	ACTGG	2 cut(s)	756, 1535
BseRI	GAGGAG	4 cut(s)	716, 1153, 1301, 1313
BseSI	GKGCMC	1 cut(s)	928
BseXI	GCAGC	5 cut(s)	250, 467, 685, 989, 1315
BsgI	GTGCAG	1 cut(s)	210
BshFI	GGCC	3 cut(s)	968, 1074, 1173
BsiHKAI	GWGCWC	3 cut(s)	37, 928, 1293
BsiHKCI	CYCGRG	2 cut(s)	77, 1101
BsiSI	CCGG	1 cut(s)	195
BslFI	GGGAC	1 cut(s)	365
BslI	CCNNNNNNNGG	1 cut(s)	552
BsmAI	GTCTC	3 cut(s)	284, 1104, 1470
BsmFI	GGGAC	1 cut(s)	365
BsnI	GGCC	3 cut(s)	968, 1074, 1173
Bso31I	GGTCTC	1 cut(s)	1104
BsoBI	CYCGRG	2 cut(s)	77, 1101
Bsp1286I	GDGCHC	4 cut(s)	37, 906, 928, 1293
Bsp1407I	TGTACA	2 cut(s)	55, 1024
Bsp143I	GATC	5 cut(s)	46, 247, 537, 817, 935
BspACI	CCGC	3 cut(s)	349, 1070, 1486
BspANI	GGCC	3 cut(s)	968, 1074, 1173
BspCNI	CTCAG	4 cut(s)	114, 280, 485, 865
BspHI	TCATGA	2 cut(s)	1153, 1431
BspLI	GGNNCC	7 cut(s)	353, 354, 562, 766, 903, 1002, 1116
BspMAI	CTGCAG	1 cut(s)	675
BspOI	GCTAGC	1 cut(s)	1331
BspPI	GGATC	2 cut(s)	532, 943
BspQI	GCTCTTC	1 cut(s)	287
BspTNI	GGTCTC	1 cut(s)	1104
BsrBI	CCGCTC	1 cut(s)	349
BsrDI	GCAATG	1 cut(s)	1528
BsrGI	TGTACA	2 cut(s)	55, 1024
BsrI	ACTGG	2 cut(s)	756, 1535
BssECI	CCNNGG	1 cut(s)	931
BssMI	GATC	5 cut(s)	46, 247, 537, 817, 935
BssNAI	GTATAC	1 cut(s)	417
BssNI	GRCGYC	1 cut(s)	1177
BssT1I	CCWWGG	1 cut(s)	931
Bst1107I	GTATAC	1 cut(s)	417
Bst2UI	CCWGG	1 cut(s)	1119
Bst4CI	ACNGT	5 cut(s)	89, 272, 520, 963, 1230
Bst6I	CTCTTC	2 cut(s)	287, 1278
BstACI	GRCGYC	1 cut(s)	1177
BstAPI	GCANNNNNTGC	1 cut(s)	452
BstAUI	TGTACA	2 cut(s)	55, 1024
BstC8I	GCNNGC	4 cut(s)	448, 829, 1072, 1329
BstDEI	CTNAG	5 cut(s)	101, 156, 288, 472, 873
BstF5I	GGATG	3 cut(s)	265, 1180, 1265
BstH2I	RGCGCY	1 cut(s)	466
BstHHI	GCGC	1 cut(s)	465
BstKTI	GATC	5 cut(s)	49, 250, 540, 820, 938
BstMAI	GTCTC	3 cut(s)	284, 1104, 1470
BstMBI	GATC	5 cut(s)	46, 247, 537, 817, 935
BstMWI	GCNNNNNNNGC	4 cut(s)	452, 665, 974, 1419
BstNI	CCWGG	1 cut(s)	1119
BstSCI	CCNGG	2 cut(s)	194, 1117
BstSFI	CTRYAG	3 cut(s)	660, 671, 912
BstSLI	GKGCMC	1 cut(s)	928
BstV1I	GCAGC	5 cut(s)	250, 467, 685, 989, 1315
BstX2I	RGATCY	1 cut(s)	247
BstYI	RGATCY	1 cut(s)	247
BstZ17I	GTATAC	1 cut(s)	417
BsuRI	GGCC	3 cut(s)	968, 1074, 1173
BtsCI	GGATG	3 cut(s)	265, 1180, 1265
BtsI	GCAGTG	2 cut(s)	222, 668
BtsIMutI	CAGTG	3 cut(s)	23, 222, 668
Cac8I	GCNNGC	4 cut(s)	448, 829, 1072, 1329
CciI	TCATGA	2 cut(s)	1153, 1431
CfoI	GCGC	1 cut(s)	465
Cfr13I	GGNCC	2 cut(s)	352, 1072
CseI	GACGC	3 cut(s)	94, 1185, 1402
Csp6I	GTAC	3 cut(s)	56, 1025, 1309
CviAII	CATG	9 cut(s)	467, 542, 743, 784, 832, 950, 1154, 1274, 1432
CviQI	GTAC	3 cut(s)	56, 1025, 1309
DdeI	CTNAG	5 cut(s)	101, 156, 288, 472, 873
DpnI	GATC	5 cut(s)	48, 249, 539, 819, 937
DpnII	GATC	5 cut(s)	46, 247, 537, 817, 935
DraI	TTTAAA	2 cut(s)	435, 1501
DriI	GACNNNNNGTC	1 cut(s)	297
EaeI	YGGCCR	1 cut(s)	966
Eam1104I	CTCTTC	2 cut(s)	287, 1278
Eam1105I	GACNNNNNGTC	1 cut(s)	297
EarI	CTCTTC	2 cut(s)	287, 1278
Ecl136II	GAGCTC	1 cut(s)	35
Eco130I	CCWWGG	1 cut(s)	931
Eco24I	GRGCYC	2 cut(s)	37, 906
Eco31I	GGTCTC	1 cut(s)	1104
Eco47I	GGWCC	1 cut(s)	352
Eco53kI	GAGCTC	1 cut(s)	35
Eco57I	CTGAAG	2 cut(s)	378, 1010
Eco88I	CYCGRG	2 cut(s)	77, 1101
EcoICRI	GAGCTC	1 cut(s)	35
EcoO109I	RGGNCCY	1 cut(s)	352
EcoRII	CCWGG	1 cut(s)	1117
EcoT14I	CCWWGG	1 cut(s)	931
EcoT38I	GRGCYC	2 cut(s)	37, 906
ErhI	CCWWGG	1 cut(s)	931
FaeI	CATG	9 cut(s)	470, 545, 746, 787, 835, 953, 1157, 1277, 1435
FaqI	GGGAC	1 cut(s)	365
FatI	CATG	9 cut(s)	466, 541, 742, 783, 831, 949, 1153, 1273, 1431
FauI	CCCGC	2 cut(s)	342, 1063
FauNDI	CATATG	1 cut(s)	1511
FbaI	TGATCA	1 cut(s)	817
FblI	GTMKAC	2 cut(s)	25, 416
Fnu4HI	GCNGC	5 cut(s)	264, 456, 674, 978, 1304
FokI	GGATG	3 cut(s)	272, 1167, 1252
FriOI	GRGCYC	2 cut(s)	37, 906
Fsp4HI	GCNGC	5 cut(s)	264, 456, 674, 978, 1304
FspBI	CTAG	2 cut(s)	230, 1328
GlaI	GCGC	1 cut(s)	464
GluI	GCNGC	5 cut(s)	264, 456, 674, 978, 1304
GsuI	CTGGAG	3 cut(s)	390, 987, 1188
HaeII	RGCGCY	1 cut(s)	466
HaeIII	GGCC	3 cut(s)	968, 1074, 1173
HapII	CCGG	1 cut(s)	195
HgaI	GACGC	3 cut(s)	94, 1185, 1402
HhaI	GCGC	1 cut(s)	465
Hin1I	GRCGYC	1 cut(s)	1177
Hin1II	CATG	9 cut(s)	470, 545, 746, 787, 835, 953, 1157, 1277, 1435
Hin6I	GCGC	1 cut(s)	463
HinP1I	GCGC	1 cut(s)	463
HincII	GTYRAC	2 cut(s)	26, 838
HindII	GTYRAC	2 cut(s)	26, 838
HindIII	AAGCTT	1 cut(s)	237
HinfI	GANTC	7 cut(s)	75, 704, 771, 779, 908, 1192, 1478
HpaII	CCGG	1 cut(s)	195
HphI	GGTGA	3 cut(s)	524, 878, 1076
Hpy166II	GTNNAC	6 cut(s)	26, 321, 417, 838, 926, 1364
Hpy188I	TCNGA	5 cut(s)	247, 289, 346, 1051, 1406
Hpy8I	GTNNAC	6 cut(s)	26, 321, 417, 838, 926, 1364
Hpy99I	CGWCG	3 cut(s)	27, 1179, 1418
HpyAV	CCTTC	4 cut(s)	430, 755, 985, 1078
HpyCH4III	ACNGT	5 cut(s)	89, 272, 520, 963, 1230
HpyCH4IV	ACGT	1 cut(s)	66
HpyF10VI	GCNNNNNNNGC	4 cut(s)	452, 665, 974, 1419
HpyF3I	CTNAG	5 cut(s)	101, 156, 288, 472, 873
HpySE526I	ACGT	1 cut(s)	66
Hsp92I	GRCGYC	1 cut(s)	1177
Hsp92II	CATG	9 cut(s)	470, 545, 746, 787, 835, 953, 1157, 1277, 1435
HspAI	GCGC	1 cut(s)	463
KflI	GGGWCCC	1 cut(s)	352
Ksp22I	TGATCA	1 cut(s)	817
Kzo9I	GATC	5 cut(s)	46, 247, 537, 817, 935
LguI	GCTCTTC	1 cut(s)	287
LmnI	GCTCC	7 cut(s)	32, 409, 566, 901, 1006, 1288, 1300
Lsp1109I	GCAGC	5 cut(s)	250, 467, 685, 989, 1315
LweI	GCATC	3 cut(s)	250, 867, 1451
MaeI	CTAG	2 cut(s)	230, 1328
MaeII	ACGT	1 cut(s)	66
MaeIII	GTNAC	5 cut(s)	151, 220, 272, 512, 1055
MalI	GATC	5 cut(s)	48, 249, 539, 819, 937
MbiI	CCGCTC	1 cut(s)	349
MboI	GATC	5 cut(s)	46, 247, 537, 817, 935
MboII	GAAGA	5 cut(s)	105, 274, 371, 1295, 1408
MfeI	CAATTG	2 cut(s)	170, 426
MflI	RGATCY	1 cut(s)	247
MhlI	GDGCHC	4 cut(s)	37, 906, 928, 1293
MlsI	TGGCCA	1 cut(s)	968
MluCI	AATT	9 cut(s)	170, 210, 383, 397, 426, 594, 801, 1077, 1239
MluNI	TGGCCA	1 cut(s)	968
MlyI	GAGTC	4 cut(s)	69, 773, 1186, 1472
Mox20I	TGGCCA	1 cut(s)	968
MscI	TGGCCA	1 cut(s)	968
MseI	TTAA	5 cut(s)	234, 434, 495, 1124, 1500
MslI	CAYNNNNRTG	3 cut(s)	69, 546, 1317
Msp20I	TGGCCA	1 cut(s)	968
MspA1I	CMGCKG	2 cut(s)	980, 1306
MspI	CCGG	1 cut(s)	195
MspR9I	CCNGG	2 cut(s)	196, 1119
MunI	CAATTG	2 cut(s)	170, 426
MvaI	CCWGG	1 cut(s)	1119
MwoI	GCNNNNNNNGC	4 cut(s)	452, 665, 974, 1419
NciI	CCSGG	1 cut(s)	196
NdeI	CATATG	1 cut(s)	1511
NdeII	GATC	5 cut(s)	46, 247, 537, 817, 935
NheI	GCTAGC	1 cut(s)	1327
NlaIII	CATG	9 cut(s)	470, 545, 746, 787, 835, 953, 1157, 1277, 1435
NlaIV	GGNNCC	7 cut(s)	353, 354, 562, 766, 903, 1002, 1116
NmeAIII	GCCGAG	1 cut(s)	484
NmuCI	GTSAC	2 cut(s)	220, 512
PaeR7I	CTCGAG	2 cut(s)	77, 1101
PagI	TCATGA	2 cut(s)	1153, 1431
PciSI	GCTCTTC	1 cut(s)	287
PcsI	WCGNNNNNNNCGW	1 cut(s)	856
PfeI	GAWTC	3 cut(s)	704, 771, 908
PflFI	GACNNNGTC	1 cut(s)	518
PkrI	GCNGC	5 cut(s)	265, 457, 675, 979, 1305
PleI	GAGTC	4 cut(s)	69, 773, 1186, 1472
PpsI	GAGTC	4 cut(s)	69, 773, 1186, 1472
PpuMI	RGGWCCY	1 cut(s)	352
PsiI	TTATAA	1 cut(s)	1199
Psp124BI	GAGCTC	1 cut(s)	37
Psp5II	RGGWCCY	1 cut(s)	352
Psp6I	CCWGG	1 cut(s)	1117
PspGI	CCWGG	1 cut(s)	1117
PspN4I	GGNNCC	7 cut(s)	353, 354, 562, 766, 903, 1002, 1116
PspPI	GGNCC	2 cut(s)	352, 1072
PspPPI	RGGWCCY	1 cut(s)	352
PspXI	VCTCGAGB	1 cut(s)	77
PstI	CTGCAG	1 cut(s)	675
PsuI	RGATCY	1 cut(s)	247
PsyI	GACNNNGTC	1 cut(s)	518
PvuII	CAGCTG	2 cut(s)	980, 1306
RsaI	GTAC	3 cut(s)	57, 1026, 1310
RsaNI	GTAC	3 cut(s)	56, 1025, 1309
RseI	CAYNNNNRTG	3 cut(s)	69, 546, 1317
SacI	GAGCTC	1 cut(s)	37
SalI	GTCGAC	1 cut(s)	24
SapI	GCTCTTC	1 cut(s)	287
SaqAI	TTAA	5 cut(s)	234, 434, 495, 1124, 1500
SatI	GCNGC	5 cut(s)	264, 456, 674, 978, 1304
Sau3AI	GATC	5 cut(s)	46, 247, 537, 817, 935
Sau96I	GGNCC	2 cut(s)	352, 1072
SchI	GAGTC	4 cut(s)	69, 773, 1186, 1472
ScrFI	CCNGG	2 cut(s)	196, 1119
SduI	GDGCHC	4 cut(s)	37, 906, 928, 1293
SfaNI	GCATC	3 cut(s)	250, 867, 1451
SfcI	CTRYAG	3 cut(s)	660, 671, 912
Sfr274I	CTCGAG	2 cut(s)	77, 1101
SinI	GGWCC	1 cut(s)	352
SlaI	CTCGAG	2 cut(s)	77, 1101
SmiMI	CAYNNNNRTG	3 cut(s)	69, 546, 1317
SmlI	CTYRAG	6 cut(s)	36, 77, 486, 632, 788, 1101
SmoI	CTYRAG	6 cut(s)	36, 77, 486, 632, 788, 1101
SpeI	ACTAGT	1 cut(s)	229
Sse9I	AATT	9 cut(s)	170, 210, 383, 397, 426, 594, 801, 1077, 1239
SsiI	CCGC	3 cut(s)	349, 1070, 1486
SspI	AATATT	1 cut(s)	339
SspMI	CTAG	2 cut(s)	230, 1328
SstI	GAGCTC	1 cut(s)	37
StyD4I	CCNGG	2 cut(s)	194, 1117
StyI	CCWWGG	1 cut(s)	931
TaaI	ACNGT	5 cut(s)	89, 272, 520, 963, 1230
TaiI	ACGT	1 cut(s)	69
TaqI	TCGA	5 cut(s)	25, 78, 850, 1102, 1416
TasI	AATT	9 cut(s)	170, 210, 383, 397, 426, 594, 801, 1077, 1239
TatI	WGTACW	2 cut(s)	55, 1024
TfiI	GAWTC	3 cut(s)	704, 771, 908
Tru1I	TTAA	5 cut(s)	234, 434, 495, 1124, 1500
Tru9I	TTAA	5 cut(s)	234, 434, 495, 1124, 1500
TscAI	CASTG	3 cut(s)	23, 229, 675
TseFI	GTSAC	2 cut(s)	220, 512
TseI	GCWGC	5 cut(s)	263, 455, 673, 977, 1303
Tsp45I	GTSAC	2 cut(s)	220, 512
TspRI	CASTG	3 cut(s)	23, 229, 675
Tth111I	GACNNNGTC	1 cut(s)	518
VneI	GTGCAC	1 cut(s)	924
VpaK11BI	GGWCC	1 cut(s)	352
XapI	RAATTY	1 cut(s)	397
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1502
XhoI	CTCGAG	2 cut(s)	77, 1101
XmiI	GTMKAC	2 cut(s)	25, 416
XspI	CTAG	2 cut(s)	230, 1328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.