Clathrin assembly protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G35200 AT5G35200 |
| fragaria_vesca | FvH4_1g02540 FvH4_1g02540 FvH4_1g02540 |
| malus_domestica | MD02G1022900.v1.1 MD15G1165600.v1.1 |
| prunus_persica | Prupe.7G249200_v2.0.a1 Prupe.7G249200_v2.0.a1 |
| pyrus_communis | pycom15g14840 |
| rosa_chinensis | RchiOBHm_Chr1g0354531 RchiOBHm_Chr2g0087571 |
| rosa_laevigata | RLG00000015879 |
| rosa_multiflora | Rmu_co7995458.1_g000001 Rmu_sc0002299.1_g000024 Rmu_sc0003071.1_g000007 Rmu_sc0006059.1_g000023 |
| rosa_roxburghii | Rroxscaffold_2G00153460 |
| rosa_rugosa | Rorug01G0476600 Rorug06G0009000 |
| rosa_samantha | Rh2AG030100 Rh2AG444300 Rh2BG030000 Rh2CG030300 Rh2CG431200 Rh2DG030200 Rh2DG503600 Rh4AG121800 |
| rosa_wichuraiana | Rw1G014010 Rw2G002390 Rw5G022520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1570 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 695 |
| Acc36I | ACCTGC | 4 cut(s) | 565, 1177, 1570, 1571 |
| AciI | CCGC | 7 cut(s) | 269, 608, 1172, 1265, 1425, 1449, 1523 |
| AclWI | GGATC | 6 cut(s) | 42, 55, 427, 440, 513, 1391 |
| AcoI | YGGCCR | 4 cut(s) | 975, 1422, 1446, 1455 |
| AcsI | RAATTY | 2 cut(s) | 951, 1389 |
| AcuI | CTGAAG | 1 cut(s) | 639 |
| AfaI | GTAC | 4 cut(s) | 42, 439, 896, 1440 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1367, 1613 |
| AgsI | TTSAA | 7 cut(s) | 280, 391, 426, 487, 1067, 1090, 1534 |
| AjiI | CACGTC | 1 cut(s) | 1013 |
| AjnI | CCWGG | 1 cut(s) | 428 |
| AluBI | AGCT | 8 cut(s) | 173, 571, 680, 908, 1145, 1230, 1250, 1338 |
| AluI | AGCT | 8 cut(s) | 173, 571, 680, 908, 1145, 1230, 1250, 1338 |
| Alw21I | GWGCWC | 1 cut(s) | 1561 |
| Alw26I | GTCTC | 3 cut(s) | 387, 781, 922 |
| AlwI | GGATC | 6 cut(s) | 42, 55, 427, 440, 513, 1391 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1160 |
| Ama87I | CYCGRG | 1 cut(s) | 204 |
| AoxI | GGCC | 8 cut(s) | 975, 1137, 1422, 1446, 1455, 1473, 1510, 1615 |
| ApeKI | GCWGC | 4 cut(s) | 859, 1112, 1250, 1465 |
| ApoI | RAATTY | 2 cut(s) | 951, 1389 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 508, 540, 701, 733 |
| AspLEI | GCGC | 1 cut(s) | 751 |
| AspS9I | GGNCC | 5 cut(s) | 319, 516, 628, 1510, 1615 |
| AsuHPI | GGTGA | 1 cut(s) | 949 |
| AsuNHI | GCTAGC | 1 cut(s) | 1253 |
| AvaI | CYCGRG | 1 cut(s) | 204 |
| AvaII | GGWCC | 3 cut(s) | 319, 516, 628 |
| BalI | TGGCCA | 2 cut(s) | 977, 1457 |
| BamHI | GGATCC | 2 cut(s) | 47, 432 |
| BbsI | GAAGAC | 2 cut(s) | 260, 998 |
| Bbv12I | GWGCWC | 1 cut(s) | 1561 |
| BbvI | GCAGC | 4 cut(s) | 871, 1124, 1237, 1477 |
| BccI | CCATC | 4 cut(s) | 496, 640, 1438, 1501 |
| BciT130I | CCWGG | 1 cut(s) | 430 |
| BclI | TGATCA | 2 cut(s) | 1093, 1162 |
| BcoDI | GTCTC | 3 cut(s) | 387, 781, 922 |
| BfaI | CTAG | 3 cut(s) | 240, 1254, 1289 |
| BfmI | CTRYAG | 3 cut(s) | 1059, 1110, 1245 |
| BfoI | RGCGCY | 1 cut(s) | 752 |
| BfuAI | ACCTGC | 4 cut(s) | 565, 1177, 1570, 1571 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1454 |
| BisI | GCNGC | 8 cut(s) | 609, 860, 1113, 1173, 1251, 1425, 1449, 1466 |
| BlsI | GCNGC | 8 cut(s) | 610, 861, 1114, 1174, 1252, 1426, 1450, 1467 |
| BmcAI | AGTACT | 1 cut(s) | 42 |
| Bme1390I | CCNGG | 1 cut(s) | 430 |
| Bme18I | GGWCC | 3 cut(s) | 319, 516, 628 |
| BmeT110I | CYCGRG | 1 cut(s) | 204 |
| BmgBI | CACGTC | 1 cut(s) | 1013 |
| BmgT120I | GGNCC | 5 cut(s) | 319, 516, 628, 1510, 1615 |
| BmiI | GGNNCC | 4 cut(s) | 49, 321, 434, 1359 |
| BmrFI | CCNGG | 1 cut(s) | 430 |
| BmrI | ACTGGG | 1 cut(s) | 274 |
| BmsI | GCATC | 8 cut(s) | 234, 672, 714, 727, 878, 1297, 1368, 1418 |
| BmtI | GCTAGC | 1 cut(s) | 1257 |
| BmuI | ACTGGG | 1 cut(s) | 274 |
| BpiI | GAAGAC | 2 cut(s) | 260, 998 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1141 |
| BpuEI | CTTGAG | 3 cut(s) | 38, 566, 1167 |
| BsaBI | GATNNNNATC | 1 cut(s) | 759 |
| BsaJI | CCNNGG | 9 cut(s) | 153, 203, 229, 512, 519, 885, 963, 1134, 1346 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1367, 1613 |
| Bse1I | ACTGG | 6 cut(s) | 111, 269, 402, 1040, 1154, 1266 |
| Bse3DI | GCAATG | 2 cut(s) | 111, 1458 |
| Bse8I | GATNNNNATC | 1 cut(s) | 759 |
| BseBI | CCWGG | 1 cut(s) | 430 |
| BseDI | CCNNGG | 9 cut(s) | 153, 203, 229, 512, 519, 885, 963, 1134, 1346 |
| BseGI | GGATG | 3 cut(s) | 225, 1009, 1409 |
| BseJI | GATNNNNATC | 1 cut(s) | 759 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1367, 1613 |
| BseMI | GCAATG | 2 cut(s) | 111, 1458 |
| BseNI | ACTGG | 6 cut(s) | 111, 269, 402, 1040, 1154, 1266 |
| BseRI | GAGGAG | 2 cut(s) | 473, 849 |
| BseXI | GCAGC | 4 cut(s) | 871, 1124, 1237, 1477 |
| BseYI | CCCAGC | 1 cut(s) | 1081 |
| BshFI | GGCC | 8 cut(s) | 977, 1139, 1424, 1448, 1457, 1475, 1512, 1617 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1561 |
| BsiHKCI | CYCGRG | 1 cut(s) | 204 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1367, 1613 |
| BsmAI | GTCTC | 3 cut(s) | 387, 781, 922 |
| BsmI | GAATGC | 1 cut(s) | 1135 |
| BsnI | GGCC | 8 cut(s) | 977, 1139, 1424, 1448, 1457, 1475, 1512, 1617 |
| BsoBI | CYCGRG | 1 cut(s) | 204 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1561 |
| Bsp1407I | TGTACA | 1 cut(s) | 1438 |
| Bsp143I | GATC | 6 cut(s) | 47, 432, 505, 1093, 1162, 1396 |
| Bsp19I | CCATGG | 4 cut(s) | 229, 885, 1134, 1346 |
| BspACI | CCGC | 7 cut(s) | 269, 608, 1172, 1265, 1425, 1449, 1523 |
| BspANI | GGCC | 8 cut(s) | 977, 1139, 1424, 1448, 1457, 1475, 1512, 1617 |
| BspHI | TCATGA | 3 cut(s) | 331, 342, 1393 |
| BspLI | GGNNCC | 4 cut(s) | 49, 321, 434, 1359 |
| BspMAI | CTGCAG | 1 cut(s) | 1114 |
| BspMI | ACCTGC | 4 cut(s) | 565, 1177, 1570, 1571 |
| BspOI | GCTAGC | 1 cut(s) | 1257 |
| BspPI | GGATC | 6 cut(s) | 42, 55, 427, 440, 513, 1391 |
| BspQI | GCTCTTC | 1 cut(s) | 20 |
| BsrDI | GCAATG | 2 cut(s) | 111, 1458 |
| BsrGI | TGTACA | 1 cut(s) | 1438 |
| BsrI | ACTGG | 6 cut(s) | 111, 269, 402, 1040, 1154, 1266 |
| BssECI | CCNNGG | 9 cut(s) | 153, 203, 229, 512, 519, 885, 963, 1134, 1346 |
| BssMI | GATC | 6 cut(s) | 47, 432, 505, 1093, 1162, 1396 |
| BssT1I | CCWWGG | 8 cut(s) | 153, 229, 512, 519, 885, 963, 1134, 1346 |
| Bst2UI | CCWGG | 1 cut(s) | 430 |
| Bst4CI | ACNGT | 4 cut(s) | 70, 697, 792, 1420 |
| Bst6I | CTCTTC | 2 cut(s) | 20, 885 |
| BstAUI | TGTACA | 1 cut(s) | 1438 |
| BstC8I | GCNNGC | 5 cut(s) | 20, 596, 780, 1255, 1356 |
| BstDEI | CTNAG | 1 cut(s) | 1141 |
| BstDSI | CCRYGG | 4 cut(s) | 229, 885, 1134, 1346 |
| BstF5I | GGATG | 3 cut(s) | 225, 1009, 1409 |
| BstH2I | RGCGCY | 1 cut(s) | 752 |
| BstHHI | GCGC | 1 cut(s) | 751 |
| BstKTI | GATC | 6 cut(s) | 50, 435, 508, 1096, 1165, 1399 |
| BstMAI | GTCTC | 3 cut(s) | 387, 781, 922 |
| BstMBI | GATC | 6 cut(s) | 47, 432, 505, 1093, 1162, 1396 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 191, 215, 746, 1250, 1454 |
| BstNI | CCWGG | 1 cut(s) | 430 |
| BstSCI | CCNGG | 1 cut(s) | 428 |
| BstSFI | CTRYAG | 3 cut(s) | 1059, 1110, 1245 |
| BstV1I | GCAGC | 4 cut(s) | 871, 1124, 1237, 1477 |
| BstV2I | GAAGAC | 2 cut(s) | 260, 998 |
| BstX2I | RGATCY | 2 cut(s) | 47, 432 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 414, 526, 1420, 1574 |
| BstYI | RGATCY | 2 cut(s) | 47, 432 |
| BsuRI | GGCC | 8 cut(s) | 977, 1139, 1424, 1448, 1457, 1475, 1512, 1617 |
| BtgI | CCRYGG | 4 cut(s) | 229, 885, 1134, 1346 |
| BtrI | CACGTC | 1 cut(s) | 1013 |
| BtsCI | GGATG | 3 cut(s) | 225, 1009, 1409 |
| BtsI | GCAGTG | 1 cut(s) | 531 |
| BtsIMutI | CAGTG | 2 cut(s) | 531, 1425 |
| BveI | ACCTGC | 4 cut(s) | 565, 1177, 1570, 1571 |
| Cac8I | GCNNGC | 5 cut(s) | 20, 596, 780, 1255, 1356 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1160 |
| CciI | TCATGA | 3 cut(s) | 331, 342, 1393 |
| CfoI | GCGC | 1 cut(s) | 751 |
| Cfr13I | GGNCC | 5 cut(s) | 319, 516, 628, 1510, 1615 |
| CseI | GACGC | 1 cut(s) | 134 |
| Csp6I | GTAC | 4 cut(s) | 41, 438, 895, 1439 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1059, 1094 |
| CviQI | GTAC | 4 cut(s) | 41, 438, 895, 1439 |
| DdeI | CTNAG | 1 cut(s) | 1141 |
| DpnI | GATC | 6 cut(s) | 49, 434, 507, 1095, 1164, 1398 |
| DpnII | GATC | 6 cut(s) | 47, 432, 505, 1093, 1162, 1396 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 695 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 695 |
| EaeI | YGGCCR | 4 cut(s) | 975, 1422, 1446, 1455 |
| Eam1104I | CTCTTC | 2 cut(s) | 20, 885 |
| EarI | CTCTTC | 2 cut(s) | 20, 885 |
| Eco130I | CCWWGG | 8 cut(s) | 153, 229, 512, 519, 885, 963, 1134, 1346 |
| Eco147I | AGGCCT | 1 cut(s) | 1475 |
| Eco47I | GGWCC | 3 cut(s) | 319, 516, 628 |
| Eco57I | CTGAAG | 1 cut(s) | 639 |
| Eco88I | CYCGRG | 1 cut(s) | 204 |
| EcoRI | GAATTC | 1 cut(s) | 1389 |
| EcoRII | CCWGG | 1 cut(s) | 428 |
| EcoT14I | CCWWGG | 8 cut(s) | 153, 229, 512, 519, 885, 963, 1134, 1346 |
| EcoT22I | ATGCAT | 2 cut(s) | 415, 1411 |
| ErhI | CCWWGG | 8 cut(s) | 153, 229, 512, 519, 885, 963, 1134, 1346 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 956, 988 |
| FauI | CCCGC | 1 cut(s) | 1258 |
| FauNDI | CATATG | 1 cut(s) | 369 |
| FbaI | TGATCA | 2 cut(s) | 1093, 1162 |
| Fnu4HI | GCNGC | 8 cut(s) | 609, 860, 1113, 1173, 1251, 1425, 1449, 1466 |
| FokI | GGATG | 3 cut(s) | 212, 1016, 1396 |
| Fsp4HI | GCNGC | 8 cut(s) | 609, 860, 1113, 1173, 1251, 1425, 1449, 1466 |
| FspBI | CTAG | 3 cut(s) | 240, 1254, 1289 |
| GlaI | GCGC | 1 cut(s) | 750 |
| GluI | GCNGC | 8 cut(s) | 609, 860, 1113, 1173, 1251, 1425, 1449, 1466 |
| GsaI | CCCAGC | 1 cut(s) | 1085 |
| HaeII | RGCGCY | 1 cut(s) | 752 |
| HaeIII | GGCC | 8 cut(s) | 977, 1139, 1424, 1448, 1457, 1475, 1512, 1617 |
| HgaI | GACGC | 1 cut(s) | 134 |
| HhaI | GCGC | 1 cut(s) | 751 |
| Hin6I | GCGC | 1 cut(s) | 749 |
| HinP1I | GCGC | 1 cut(s) | 749 |
| HincII | GTYRAC | 1 cut(s) | 709 |
| HindII | GTYRAC | 1 cut(s) | 709 |
| HinfI | GANTC | 5 cut(s) | 133, 398, 817, 1534, 1546 |
| HphI | GGTGA | 1 cut(s) | 949 |
| Hpy166II | GTNNAC | 3 cut(s) | 319, 709, 1016 |
| Hpy188I | TCNGA | 6 cut(s) | 170, 658, 765, 796, 902, 1162 |
| Hpy188III | TCNNGA | 6 cut(s) | 332, 343, 667, 821, 1103, 1394 |
| Hpy8I | GTNNAC | 3 cut(s) | 319, 709, 1016 |
| HpyAV | CCTTC | 3 cut(s) | 739, 1029, 1486 |
| HpyCH4III | ACNGT | 4 cut(s) | 70, 697, 792, 1420 |
| HpyCH4IV | ACGT | 2 cut(s) | 897, 1012 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 191, 215, 746, 1250, 1454 |
| HpyF3I | CTNAG | 1 cut(s) | 1141 |
| HpySE526I | ACGT | 2 cut(s) | 897, 1012 |
| HspAI | GCGC | 1 cut(s) | 749 |
| Ksp22I | TGATCA | 2 cut(s) | 1093, 1162 |
| Kzo9I | GATC | 6 cut(s) | 47, 432, 505, 1093, 1162, 1396 |
| LguI | GCTCTTC | 1 cut(s) | 20 |
| LmnI | GCTCC | 5 cut(s) | 913, 1351, 1363, 1556, 1577 |
| Lsp1109I | GCAGC | 4 cut(s) | 871, 1124, 1237, 1477 |
| LweI | GCATC | 8 cut(s) | 234, 672, 714, 727, 878, 1297, 1368, 1418 |
| MaeI | CTAG | 3 cut(s) | 240, 1254, 1289 |
| MaeII | ACGT | 2 cut(s) | 897, 1012 |
| MaeIII | GTNAC | 2 cut(s) | 686, 1216 |
| MalI | GATC | 6 cut(s) | 49, 434, 507, 1095, 1164, 1398 |
| MboI | GATC | 6 cut(s) | 47, 432, 505, 1093, 1162, 1396 |
| MboII | GAAGA | 7 cut(s) | 37, 265, 347, 902, 1003, 1138, 1329 |
| MflI | RGATCY | 2 cut(s) | 47, 432 |
| MhlI | GDGCHC | 1 cut(s) | 1561 |
| MlsI | TGGCCA | 2 cut(s) | 977, 1457 |
| MluNI | TGGCCA | 2 cut(s) | 977, 1457 |
| MlyI | GAGTC | 1 cut(s) | 826 |
| MmeI | TCCRAC | 2 cut(s) | 1254, 1437 |
| Mox20I | TGGCCA | 2 cut(s) | 977, 1457 |
| Mph1103I | ATGCAT | 2 cut(s) | 415, 1411 |
| MscI | TGGCCA | 2 cut(s) | 977, 1457 |
| MseI | TTAA | 2 cut(s) | 375, 849 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1572 |
| Msp20I | TGGCCA | 2 cut(s) | 977, 1457 |
| MspA1I | CMGCKG | 1 cut(s) | 1250 |
| MspR9I | CCNGG | 1 cut(s) | 430 |
| Mva1269I | GAATGC | 1 cut(s) | 1135 |
| MvaI | CCWGG | 1 cut(s) | 430 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 191, 215, 746, 1250, 1454 |
| NcoI | CCATGG | 4 cut(s) | 229, 885, 1134, 1346 |
| NdeI | CATATG | 1 cut(s) | 369 |
| NdeII | GATC | 6 cut(s) | 47, 432, 505, 1093, 1162, 1396 |
| NheI | GCTAGC | 1 cut(s) | 1253 |
| NlaIV | GGNNCC | 4 cut(s) | 49, 321, 434, 1359 |
| NmuCI | GTSAC | 1 cut(s) | 686 |
| NsiI | ATGCAT | 2 cut(s) | 415, 1411 |
| PagI | TCATGA | 3 cut(s) | 331, 342, 1393 |
| PaqCI | CACCTGC | 1 cut(s) | 1570 |
| PceI | AGGCCT | 1 cut(s) | 1475 |
| PciSI | GCTCTTC | 1 cut(s) | 20 |
| PctI | GAATGC | 1 cut(s) | 1135 |
| PfeI | GAWTC | 4 cut(s) | 133, 398, 1534, 1546 |
| PkrI | GCNGC | 8 cut(s) | 610, 861, 1114, 1174, 1252, 1426, 1450, 1467 |
| PleI | GAGTC | 1 cut(s) | 825 |
| PpsI | GAGTC | 1 cut(s) | 825 |
| Psp6I | CCWGG | 1 cut(s) | 428 |
| PspFI | CCCAGC | 1 cut(s) | 1081 |
| PspGI | CCWGG | 1 cut(s) | 428 |
| PspN4I | GGNNCC | 4 cut(s) | 49, 321, 434, 1359 |
| PspPI | GGNCC | 5 cut(s) | 319, 516, 628, 1510, 1615 |
| PstI | CTGCAG | 1 cut(s) | 1114 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1160 |
| PsuI | RGATCY | 2 cut(s) | 47, 432 |
| PvuII | CAGCTG | 1 cut(s) | 1250 |
| RsaI | GTAC | 4 cut(s) | 42, 439, 896, 1440 |
| RsaNI | GTAC | 4 cut(s) | 41, 438, 895, 1439 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1572 |
| SapI | GCTCTTC | 1 cut(s) | 20 |
| SaqAI | TTAA | 2 cut(s) | 375, 849 |
| SatI | GCNGC | 8 cut(s) | 609, 860, 1113, 1173, 1251, 1425, 1449, 1466 |
| Sau3AI | GATC | 6 cut(s) | 47, 432, 505, 1093, 1162, 1396 |
| Sau96I | GGNCC | 5 cut(s) | 319, 516, 628, 1510, 1615 |
| ScaI | AGTACT | 1 cut(s) | 42 |
| SchI | GAGTC | 1 cut(s) | 826 |
| ScrFI | CCNGG | 1 cut(s) | 430 |
| SduI | GDGCHC | 1 cut(s) | 1561 |
| SfaNI | GCATC | 8 cut(s) | 234, 672, 714, 727, 878, 1297, 1368, 1418 |
| SfcI | CTRYAG | 3 cut(s) | 1059, 1110, 1245 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1454 |
| SinI | GGWCC | 3 cut(s) | 319, 516, 628 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1572 |
| SmlI | CTYRAG | 3 cut(s) | 53, 545, 1182 |
| SmoI | CTYRAG | 3 cut(s) | 53, 545, 1182 |
| SseBI | AGGCCT | 1 cut(s) | 1475 |
| SsiI | CCGC | 7 cut(s) | 269, 608, 1172, 1265, 1425, 1449, 1523 |
| SspMI | CTAG | 3 cut(s) | 240, 1254, 1289 |
| StuI | AGGCCT | 1 cut(s) | 1475 |
| StyD4I | CCNGG | 1 cut(s) | 428 |
| StyI | CCWWGG | 8 cut(s) | 153, 229, 512, 519, 885, 963, 1134, 1346 |
| TaaI | ACNGT | 4 cut(s) | 70, 697, 792, 1420 |
| TaiI | ACGT | 2 cut(s) | 900, 1015 |
| TaqI | TCGA | 1 cut(s) | 644 |
| TatI | WGTACW | 2 cut(s) | 40, 1438 |
| TauI | GCSGC | 4 cut(s) | 611, 1175, 1427, 1451 |
| TfiI | GAWTC | 4 cut(s) | 133, 398, 1534, 1546 |
| Tru1I | TTAA | 2 cut(s) | 375, 849 |
| Tru9I | TTAA | 2 cut(s) | 375, 849 |
| TscAI | CASTG | 2 cut(s) | 538, 1425 |
| TseFI | GTSAC | 1 cut(s) | 686 |
| TseI | GCWGC | 4 cut(s) | 859, 1112, 1250, 1465 |
| Tsp45I | GTSAC | 1 cut(s) | 686 |
| TspGWI | ACGGA | 2 cut(s) | 425, 705 |
| TspRI | CASTG | 2 cut(s) | 538, 1425 |
| VpaK11BI | GGWCC | 3 cut(s) | 319, 516, 628 |
| XapI | RAATTY | 2 cut(s) | 951, 1389 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 73, 970 |
| XspI | CTAG | 3 cut(s) | 240, 1254, 1289 |
| ZrmI | AGTACT | 1 cut(s) | 42 |
| Zsp2I | ATGCAT | 2 cut(s) | 415, 1411 |