Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g18690 FvH4_7g18690 FvH4_7g18690 FvH4_7g18690 FvH4_7g18690 FvH4_7g18690 FvH4_7g18690 FvH4_7g18690 |
| rosa_chinensis | RchiOBHm_Chr1g0362441 RchiOBHm_Chr1g0362461 |
| rosa_laevigata | RLG00000027646 RLG00000027647 |
| rosa_multiflora | Rmu_co8099662.1_g000001 Rmu_co8183750.1_g000001 Rmu_sc0001823.1_g000003 Rmu_sc0007589.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00294140 Rroxscaffold_4G00294150 Rroxscaffold_4G00294160 |
| rosa_rugosa | Rorug01G0298100 |
| rosa_samantha | Rh1AG307400 Rh1AG307600 Rh1BG270700 Rh1CG084300 Rh1CG084400 Rh1CG288100 Rh1CG288300 Rh1DG300900 |
| rosa_wichuraiana | Rw0G020280 Rw1G027280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1146 |
| AccB1I | GGYRCC | 1 cut(s) | 570 |
| AccI | GTMKAC | 1 cut(s) | 1383 |
| AccII | CGCG | 2 cut(s) | 1415, 1550 |
| AccIII | TCCGGA | 1 cut(s) | 48 |
| AciI | CCGC | 3 cut(s) | 32, 1413, 1550 |
| AclWI | GGATC | 3 cut(s) | 113, 1173, 1290 |
| AcoI | YGGCCR | 1 cut(s) | 1016 |
| AcsI | RAATTY | 3 cut(s) | 679, 985, 1007 |
| AcyI | GRCGYC | 1 cut(s) | 1143 |
| AfaI | GTAC | 6 cut(s) | 36, 826, 1110, 1241, 1271, 1477 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 172, 468 |
| AflII | CTTAAG | 1 cut(s) | 443 |
| AflIII | ACRYGT | 1 cut(s) | 596 |
| AhlI | ACTAGT | 2 cut(s) | 649, 725 |
| AjnI | CCWGG | 1 cut(s) | 1220 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 891, 923 |
| AluBI | AGCT | 5 cut(s) | 275, 311, 953, 973, 1662 |
| AluI | AGCT | 5 cut(s) | 275, 311, 953, 973, 1662 |
| Alw26I | GTCTC | 3 cut(s) | 115, 1028, 1368 |
| AlwI | GGATC | 3 cut(s) | 113, 1173, 1290 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 973 |
| Aor13HI | TCCGGA | 1 cut(s) | 48 |
| AoxI | GGCC | 3 cut(s) | 1016, 1410, 1634 |
| ApeKI | GCWGC | 1 cut(s) | 618 |
| ApoI | RAATTY | 3 cut(s) | 679, 985, 1007 |
| AspLEI | GCGC | 1 cut(s) | 1417 |
| AspS9I | GGNCC | 2 cut(s) | 1318, 1410 |
| AsuHPI | GGTGA | 1 cut(s) | 829 |
| AvaII | GGWCC | 1 cut(s) | 1318 |
| BalI | TGGCCA | 1 cut(s) | 1018 |
| BanI | GGYRCC | 1 cut(s) | 570 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 749, 781 |
| BauI | CACGAG | 1 cut(s) | 529 |
| BbvI | GCAGC | 1 cut(s) | 630 |
| BccI | CCATC | 2 cut(s) | 988, 1354 |
| BceAI | ACGGC | 1 cut(s) | 282 |
| BciT130I | CCWGG | 1 cut(s) | 1222 |
| BciVI | GTATCC | 1 cut(s) | 70 |
| BcoDI | GTCTC | 3 cut(s) | 115, 1028, 1368 |
| BcuI | ACTAGT | 2 cut(s) | 649, 725 |
| BfaI | CTAG | 8 cut(s) | 116, 650, 719, 726, 1160, 1329, 1587, 1659 |
| BfmI | CTRYAG | 1 cut(s) | 1663 |
| BfrI | CTTAAG | 1 cut(s) | 443 |
| BfuI | GTATCC | 1 cut(s) | 70 |
| BisI | GCNGC | 3 cut(s) | 619, 1413, 1551 |
| BlsI | GCNGC | 3 cut(s) | 620, 1414, 1552 |
| BmcAI | AGTACT | 1 cut(s) | 826 |
| Bme1390I | CCNGG | 1 cut(s) | 1222 |
| Bme18I | GGWCC | 1 cut(s) | 1318 |
| BmgT120I | GGNCC | 2 cut(s) | 1318, 1410 |
| BmiI | GGNNCC | 2 cut(s) | 572, 1319 |
| BmrFI | CCNGG | 1 cut(s) | 1222 |
| BmsI | GCATC | 1 cut(s) | 1146 |
| BpuEI | CTTGAG | 1 cut(s) | 1388 |
| BsaHI | GRCGYC | 1 cut(s) | 1143 |
| BsaI | GGTCTC | 1 cut(s) | 1368 |
| BsaJI | CCNNGG | 3 cut(s) | 407, 1013, 1019 |
| BsaWI | WCCGGW | 2 cut(s) | 48, 461 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 172, 468 |
| Bse1I | ACTGG | 1 cut(s) | 1172 |
| BseAI | TCCGGA | 1 cut(s) | 48 |
| BseBI | CCWGG | 1 cut(s) | 1222 |
| BseDI | CCNNGG | 3 cut(s) | 407, 1013, 1019 |
| BseGI | GGATG | 5 cut(s) | 57, 345, 393, 999, 1230 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 172, 468 |
| BseMII | CTCAG | 2 cut(s) | 1394, 1583 |
| BseNI | ACTGG | 1 cut(s) | 1172 |
| BseRI | GAGGAG | 3 cut(s) | 956, 959, 1330 |
| BseXI | GCAGC | 1 cut(s) | 630 |
| BseYI | CCCAGC | 1 cut(s) | 1149 |
| BsgI | GTGCAG | 1 cut(s) | 637 |
| Bsh1236I | CGCG | 2 cut(s) | 1415, 1550 |
| BshFI | GGCC | 3 cut(s) | 1018, 1412, 1636 |
| BshNI | GGYRCC | 1 cut(s) | 570 |
| BsiSI | CCGG | 2 cut(s) | 49, 462 |
| BslFI | GGGAC | 3 cut(s) | 251, 308, 470 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 172, 468 |
| BsmAI | GTCTC | 3 cut(s) | 115, 1028, 1368 |
| BsmFI | GGGAC | 3 cut(s) | 251, 308, 470 |
| BsmI | GAATGC | 1 cut(s) | 482 |
| BsnI | GGCC | 3 cut(s) | 1018, 1412, 1636 |
| Bso31I | GGTCTC | 1 cut(s) | 1368 |
| Bsp13I | TCCGGA | 1 cut(s) | 48 |
| Bsp143I | GATC | 9 cut(s) | 40, 118, 209, 287, 1165, 1183, 1282, 1543, 1595 |
| BspACI | CCGC | 3 cut(s) | 32, 1413, 1550 |
| BspANI | GGCC | 3 cut(s) | 1018, 1412, 1636 |
| BspCNI | CTCAG | 2 cut(s) | 1395, 1584 |
| BspEI | TCCGGA | 1 cut(s) | 48 |
| BspFNI | CGCG | 2 cut(s) | 1415, 1550 |
| BspLI | GGNNCC | 2 cut(s) | 572, 1319 |
| BspPI | GGATC | 3 cut(s) | 113, 1173, 1290 |
| BspT107I | GGYRCC | 1 cut(s) | 570 |
| BspTI | CTTAAG | 1 cut(s) | 443 |
| BspTNI | GGTCTC | 1 cut(s) | 1368 |
| BsrI | ACTGG | 1 cut(s) | 1172 |
| BssECI | CCNNGG | 3 cut(s) | 407, 1013, 1019 |
| BssMI | GATC | 9 cut(s) | 40, 118, 209, 287, 1165, 1183, 1282, 1543, 1595 |
| BssNI | GRCGYC | 1 cut(s) | 1143 |
| BssSI | CACGAG | 1 cut(s) | 529 |
| BssT1I | CCWWGG | 3 cut(s) | 407, 1013, 1019 |
| Bst2BI | CACGAG | 1 cut(s) | 529 |
| Bst2UI | CCWGG | 1 cut(s) | 1222 |
| Bst4CI | ACNGT | 3 cut(s) | 28, 688, 1465 |
| Bst6I | CTCTTC | 1 cut(s) | 50 |
| BstACI | GRCGYC | 1 cut(s) | 1143 |
| BstAFI | CTTAAG | 1 cut(s) | 443 |
| BstC8I | GCNNGC | 1 cut(s) | 507 |
| BstDEI | CTNAG | 3 cut(s) | 422, 1403, 1592 |
| BstF5I | GGATG | 5 cut(s) | 57, 345, 393, 999, 1230 |
| BstFNI | CGCG | 2 cut(s) | 1415, 1550 |
| BstHHI | GCGC | 1 cut(s) | 1417 |
| BstKTI | GATC | 9 cut(s) | 43, 121, 212, 290, 1168, 1186, 1285, 1546, 1598 |
| BstMAI | GTCTC | 3 cut(s) | 115, 1028, 1368 |
| BstMBI | GATC | 9 cut(s) | 40, 118, 209, 287, 1165, 1183, 1282, 1543, 1595 |
| BstNI | CCWGG | 1 cut(s) | 1222 |
| BstNSI | RCATGY | 3 cut(s) | 505, 600, 1382 |
| BstSCI | CCNGG | 1 cut(s) | 1220 |
| BstSFI | CTRYAG | 1 cut(s) | 1663 |
| BstUI | CGCG | 2 cut(s) | 1415, 1550 |
| BstV1I | GCAGC | 1 cut(s) | 630 |
| BstX2I | RGATCY | 2 cut(s) | 118, 1165 |
| BstYI | RGATCY | 2 cut(s) | 118, 1165 |
| BsuI | GTATCC | 1 cut(s) | 70 |
| BsuRI | GGCC | 3 cut(s) | 1018, 1412, 1636 |
| BtgZI | GCGATG | 1 cut(s) | 1169 |
| BtsCI | GGATG | 5 cut(s) | 57, 345, 393, 999, 1230 |
| BtsIMutI | CAGTG | 1 cut(s) | 1179 |
| Cac8I | GCNNGC | 1 cut(s) | 507 |
| CaiI | CAGNNNCTG | 1 cut(s) | 973 |
| CfoI | GCGC | 1 cut(s) | 1417 |
| Cfr13I | GGNCC | 2 cut(s) | 1318, 1410 |
| Csp6I | GTAC | 6 cut(s) | 35, 825, 1109, 1240, 1270, 1476 |
| CviAII | CATG | 4 cut(s) | 502, 597, 1288, 1379 |
| CviQI | GTAC | 6 cut(s) | 35, 825, 1109, 1240, 1270, 1476 |
| DdeI | CTNAG | 3 cut(s) | 422, 1403, 1592 |
| DpnI | GATC | 9 cut(s) | 42, 120, 211, 289, 1167, 1185, 1284, 1545, 1597 |
| DpnII | GATC | 9 cut(s) | 40, 118, 209, 287, 1165, 1183, 1282, 1543, 1595 |
| DraI | TTTAAA | 1 cut(s) | 1180 |
| EaeI | YGGCCR | 1 cut(s) | 1016 |
| Eam1104I | CTCTTC | 1 cut(s) | 50 |
| EarI | CTCTTC | 1 cut(s) | 50 |
| Eco130I | CCWWGG | 3 cut(s) | 407, 1013, 1019 |
| Eco31I | GGTCTC | 1 cut(s) | 1368 |
| Eco32I | GATATC | 1 cut(s) | 374 |
| Eco47I | GGWCC | 1 cut(s) | 1318 |
| EcoRI | GAATTC | 1 cut(s) | 1007 |
| EcoRII | CCWGG | 1 cut(s) | 1220 |
| EcoRV | GATATC | 1 cut(s) | 374 |
| EcoT14I | CCWWGG | 3 cut(s) | 407, 1013, 1019 |
| ErhI | CCWWGG | 3 cut(s) | 407, 1013, 1019 |
| FaeI | CATG | 4 cut(s) | 505, 600, 1291, 1382 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1350, 1382 |
| FaqI | GGGAC | 3 cut(s) | 251, 308, 470 |
| FatI | CATG | 4 cut(s) | 501, 596, 1287, 1378 |
| FauNDI | CATATG | 2 cut(s) | 233, 1188 |
| FblI | GTMKAC | 1 cut(s) | 1383 |
| Fnu4HI | GCNGC | 3 cut(s) | 619, 1413, 1551 |
| FokI | GGATG | 5 cut(s) | 64, 332, 380, 1006, 1237 |
| Fsp4HI | GCNGC | 3 cut(s) | 619, 1413, 1551 |
| FspBI | CTAG | 8 cut(s) | 116, 650, 719, 726, 1160, 1329, 1587, 1659 |
| GlaI | GCGC | 1 cut(s) | 1416 |
| GluI | GCNGC | 3 cut(s) | 619, 1413, 1551 |
| GsaI | CCCAGC | 1 cut(s) | 1153 |
| HaeIII | GGCC | 3 cut(s) | 1018, 1412, 1636 |
| HapII | CCGG | 2 cut(s) | 49, 462 |
| HhaI | GCGC | 1 cut(s) | 1417 |
| Hin1I | GRCGYC | 1 cut(s) | 1143 |
| Hin1II | CATG | 4 cut(s) | 505, 600, 1291, 1382 |
| Hin6I | GCGC | 1 cut(s) | 1415 |
| HinP1I | GCGC | 1 cut(s) | 1415 |
| HinfI | GANTC | 3 cut(s) | 670, 1093, 1337 |
| HpaII | CCGG | 2 cut(s) | 49, 462 |
| HphI | GGTGA | 1 cut(s) | 829 |
| Hpy166II | GTNNAC | 3 cut(s) | 1240, 1321, 1384 |
| Hpy188I | TCNGA | 2 cut(s) | 378, 912 |
| Hpy188III | TCNNGA | 7 cut(s) | 49, 362, 633, 751, 1033, 1367, 1530 |
| Hpy8I | GTNNAC | 3 cut(s) | 1240, 1321, 1384 |
| Hpy99I | CGWCG | 1 cut(s) | 757 |
| HpyAV | CCTTC | 6 cut(s) | 1298, 1454, 1481, 1510, 1613, 1631 |
| HpyCH4III | ACNGT | 3 cut(s) | 28, 688, 1465 |
| HpyCH4IV | ACGT | 2 cut(s) | 979, 1143 |
| HpyCH4V | TGCA | 8 cut(s) | 107, 296, 404, 482, 618, 851, 922, 1057 |
| HpyF3I | CTNAG | 3 cut(s) | 422, 1403, 1592 |
| HpySE526I | ACGT | 2 cut(s) | 979, 1143 |
| Hsp92I | GRCGYC | 1 cut(s) | 1143 |
| Hsp92II | CATG | 4 cut(s) | 505, 600, 1291, 1382 |
| HspAI | GCGC | 1 cut(s) | 1415 |
| Kpn2I | TCCGGA | 1 cut(s) | 48 |
| Kzo9I | GATC | 9 cut(s) | 40, 118, 209, 287, 1165, 1183, 1282, 1543, 1595 |
| Lsp1109I | GCAGC | 1 cut(s) | 630 |
| LweI | GCATC | 1 cut(s) | 1146 |
| MaeI | CTAG | 8 cut(s) | 116, 650, 719, 726, 1160, 1329, 1587, 1659 |
| MaeII | ACGT | 2 cut(s) | 979, 1143 |
| MaeIII | GTNAC | 6 cut(s) | 3, 512, 640, 817, 1139, 1508 |
| MalI | GATC | 9 cut(s) | 42, 120, 211, 289, 1167, 1185, 1284, 1545, 1597 |
| MboI | GATC | 9 cut(s) | 40, 118, 209, 287, 1165, 1183, 1282, 1543, 1595 |
| MboII | GAAGA | 7 cut(s) | 37, 167, 601, 1037, 1139, 1160, 1575 |
| MflI | RGATCY | 2 cut(s) | 118, 1165 |
| MlsI | TGGCCA | 1 cut(s) | 1018 |
| MluNI | TGGCCA | 1 cut(s) | 1018 |
| MlyI | GAGTC | 2 cut(s) | 1087, 1331 |
| MmeI | TCCRAC | 2 cut(s) | 47, 164 |
| Mox20I | TGGCCA | 1 cut(s) | 1018 |
| MroI | TCCGGA | 1 cut(s) | 48 |
| MscI | TGGCCA | 1 cut(s) | 1018 |
| MseI | TTAA | 4 cut(s) | 335, 444, 1044, 1179 |
| MslI | CAYNNNNRTG | 1 cut(s) | 775 |
| Msp20I | TGGCCA | 1 cut(s) | 1018 |
| MspCI | CTTAAG | 1 cut(s) | 443 |
| MspI | CCGG | 2 cut(s) | 49, 462 |
| MspR9I | CCNGG | 1 cut(s) | 1222 |
| Mva1269I | GAATGC | 1 cut(s) | 482 |
| MvaI | CCWGG | 1 cut(s) | 1222 |
| MvnI | CGCG | 2 cut(s) | 1415, 1550 |
| NdeI | CATATG | 2 cut(s) | 233, 1188 |
| NdeII | GATC | 9 cut(s) | 40, 118, 209, 287, 1165, 1183, 1282, 1543, 1595 |
| NlaIII | CATG | 4 cut(s) | 505, 600, 1291, 1382 |
| NlaIV | GGNNCC | 2 cut(s) | 572, 1319 |
| NmuCI | GTSAC | 5 cut(s) | 512, 640, 817, 1139, 1508 |
| NspI | RCATGY | 3 cut(s) | 505, 600, 1382 |
| PciI | ACATGT | 1 cut(s) | 596 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1434, 1612 |
| PctI | GAATGC | 1 cut(s) | 482 |
| PfeI | GAWTC | 1 cut(s) | 670 |
| PflFI | GACNNNGTC | 1 cut(s) | 423 |
| PkrI | GCNGC | 3 cut(s) | 620, 1414, 1552 |
| PleI | GAGTC | 2 cut(s) | 1087, 1331 |
| PpsI | GAGTC | 2 cut(s) | 1087, 1331 |
| PscI | ACATGT | 1 cut(s) | 596 |
| Psp6I | CCWGG | 1 cut(s) | 1220 |
| PspFI | CCCAGC | 1 cut(s) | 1149 |
| PspGI | CCWGG | 1 cut(s) | 1220 |
| PspN4I | GGNNCC | 2 cut(s) | 572, 1319 |
| PspPI | GGNCC | 2 cut(s) | 1318, 1410 |
| PstNI | CAGNNNCTG | 1 cut(s) | 973 |
| PsuI | RGATCY | 2 cut(s) | 118, 1165 |
| PsyI | GACNNNGTC | 1 cut(s) | 423 |
| RsaI | GTAC | 6 cut(s) | 36, 826, 1110, 1241, 1271, 1477 |
| RsaNI | GTAC | 6 cut(s) | 35, 825, 1109, 1240, 1270, 1476 |
| RseI | CAYNNNNRTG | 1 cut(s) | 775 |
| SaqAI | TTAA | 4 cut(s) | 335, 444, 1044, 1179 |
| SatI | GCNGC | 3 cut(s) | 619, 1413, 1551 |
| Sau3AI | GATC | 9 cut(s) | 40, 118, 209, 287, 1165, 1183, 1282, 1543, 1595 |
| Sau96I | GGNCC | 2 cut(s) | 1318, 1410 |
| ScaI | AGTACT | 1 cut(s) | 826 |
| SchI | GAGTC | 2 cut(s) | 1087, 1331 |
| ScrFI | CCNGG | 1 cut(s) | 1222 |
| SfaNI | GCATC | 1 cut(s) | 1146 |
| SfcI | CTRYAG | 1 cut(s) | 1663 |
| SinI | GGWCC | 1 cut(s) | 1318 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 775 |
| SmlI | CTYRAG | 2 cut(s) | 443, 1367 |
| SmoI | CTYRAG | 2 cut(s) | 443, 1367 |
| SpeI | ACTAGT | 2 cut(s) | 649, 725 |
| SsiI | CCGC | 3 cut(s) | 32, 1413, 1550 |
| SspI | AATATT | 1 cut(s) | 1567 |
| SspMI | CTAG | 8 cut(s) | 116, 650, 719, 726, 1160, 1329, 1587, 1659 |
| StyD4I | CCNGG | 1 cut(s) | 1220 |
| StyI | CCWWGG | 3 cut(s) | 407, 1013, 1019 |
| TaaI | ACNGT | 3 cut(s) | 28, 688, 1465 |
| TaiI | ACGT | 2 cut(s) | 982, 1146 |
| TaqI | TCGA | 8 cut(s) | 39, 418, 632, 752, 1032, 1091, 1437, 1650 |
| TaqII | GACCGA | 1 cut(s) | 853 |
| TatI | WGTACW | 2 cut(s) | 824, 1269 |
| TauI | GCSGC | 2 cut(s) | 1415, 1553 |
| TfiI | GAWTC | 1 cut(s) | 670 |
| Tru1I | TTAA | 4 cut(s) | 335, 444, 1044, 1179 |
| Tru9I | TTAA | 4 cut(s) | 335, 444, 1044, 1179 |
| TscAI | CASTG | 1 cut(s) | 1179 |
| TseFI | GTSAC | 5 cut(s) | 512, 640, 817, 1139, 1508 |
| TseI | GCWGC | 1 cut(s) | 618 |
| Tsp45I | GTSAC | 5 cut(s) | 512, 640, 817, 1139, 1508 |
| TspDTI | ATGAA | 6 cut(s) | 220, 382, 683, 941, 950, 1241 |
| TspGWI | ACGGA | 4 cut(s) | 233, 1349, 1401, 1443 |
| TspRI | CASTG | 1 cut(s) | 1179 |
| Tth111I | GACNNNGTC | 1 cut(s) | 423 |
| Vha464I | CTTAAG | 1 cut(s) | 443 |
| VpaK11BI | GGWCC | 1 cut(s) | 1318 |
| XapI | RAATTY | 3 cut(s) | 679, 985, 1007 |
| XceI | RCATGY | 3 cut(s) | 505, 600, 1382 |
| XmiI | GTMKAC | 1 cut(s) | 1383 |
| XspI | CTAG | 8 cut(s) | 116, 650, 719, 726, 1160, 1329, 1587, 1659 |
| ZraI | GACGTC | 1 cut(s) | 1144 |
| ZrmI | AGTACT | 1 cut(s) | 826 |