Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002511

Physical Location & Seq

Genomic Coordinates Reverse (-)

59916156 .. 59924601

Gene Structure 8446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3750 bp

ATGTTGGCTAAACTCTTCAAAAGACCCTCACAAAAACAACATCATCCTCAGGCAAGGGTGTCACAAGCTGATTTGGATCCAAGAATTGTTTTTCACTATGGGATTCCATCTACTGCATCGATTCTCGCACTTGATCGCACGCAGAGCTTGCTGGCAATTGGAACCCTGGATGGCAGGATAAAAGTGATCGGTGGCGATAATATTGAAGGGCTTCTGATATCTCCTGAGCCATTGGCCTTTAAATACTTGGAGTTCTTAGAAAATCAAGGTTTTTTAGCTAGTGTCTCAAGTGAAAATGAAATTCAGGTTTGGGATTTGGAACAGAAGCAAATAGCCGGTTCTTTACAGTGGGAATGCAATATAACTGCCTTCTCTGTTATTTATGGCACCAATTACATGTATATTGGAAGCGAATATGCAATGGTGTCTATGGTGAAACTGCTGATTGCATATGAGAATGGTCTGATTGTTCTCTGGGATGCTTTAGAAGATCAAGTTGTGCTTGTAAGAGGTTCCAAGGACCTGCAAGTGAAGGAAGAAACAGTCCATAATTCTTTTGAAGGCACAAGAACTGAGCTGACTGATGCTACATCAGACAGCAAACAGGTGGAGAAAGAGATAAGCTCTCTTTGTTGGGTATGCGATGATGGGTCAAGTCTTGCTGTTGGCTATGTAGATGGTGATATAATGTTTTGGGATATATCAACTGCTGAGTCTACCCAGGATCATAGATCTAAAAAGTTAGCTAACAATGTTGCGAAGCTAGAGTTATCATCAGATGACAAGAGATTCCCTGTCATAGTTTTACACTGGTCTGCAAATAGGTTAAGTCATCATCCTAGGGGCCAACTCTTTGTTTATGGAGGTGAAGGAATTGGGTCTGAAGAAGTTCTCACGGTTCTGAGCGTGGATTGGTCTTCAGGAATAGAAAGTCTGAAATGCATAGGTCGTGTGGACCTTACACTTGTTGGTTCATTTGCAGATATGATTTTACTTCCAGCAGCTGGTGCAATGGAGAACGGTGAAACATTGCTATTCACTTTGACAAATCAGGGACAACTGCATGTCTATGACAAGGCTTGCTGGTCTGCCTTAATGTCTCACCAAAAGAAAAGGACTGATGGGACTGCAGTGCAGTCTCCTACGTTTATACCTACTACTGAACCGTGTATGACTGTGGCAAAGCTTGCTTTGGTGGATAGAGATGGGAAATACTCCTCAGCTTTGTCCAAGGTAGTGTTCTTTTGTGACACAATCAACTCTAGTTACATTGCATCTTGGTACTATCATCAACCATCACTTAGGTTTTCTATAATAATGAGATTGACTCGGCTGAAAAACTTCACGAAGCATATAGAAGGAGAATTCAAGTATTCTTCCTCTTCCCTGTCTCTTCCTTTGTTGATTTTGTGTCTTTTGGTCATTAAGGAAGTTTCAGTTGACAAGTCTAATGCGAAACACACTTTGAAGAAGGGGGGTGCAAAGTGGCCTTTGACTGGTGGTGTTCCCAGCCAACTTTCTGATGCTGAAAATTTTCATGTCGAGAGACTATATGTAGCAGGATATCAAGATGGATCTGTTCGACTATGGGATGCCACCTATCCAACTCCGTCGCTTATATATGCTATAGGTCCTGAGGTAAAAGGCATCAGATCTACAGGTGCAAATGGAACAGTCTCAGCATTGGAATTTTGTTCTCTTACTTTAAAATTAGCTATTGGTGATGTGTGTGGTCTGGTTCGTCTATATAAACTAATTGGGAGTTCAGATGAGACAGAATTGCACTTTGTGACAAAAACAGAGAAGGAAGTTTATACTTCACAACAAGGTAATGGGCCTCGGTGCACAGCTGTGTTTTCTATTCTTGATTCTCCTATATCCATACTACAATATGCAAATTTTGGAGCAAGACTGACTGTGGGATATGAATGTGGCCGGGTTGCAATGCTTGATATTAGTACATCGTCAGTTTTGTTTCTTACAGACAGTGTCTCCAACTCAAGTTCCCCAGTCATCTGTCTGTCTGTGAAATCATTTTCAGATACTAATAGCATATCACAGAGCCCAAAGGGCTCTGAATCCAAGAATTCGACTGATCCTCAAAATGGAATGAATCCAAAGGATTCTGAATCCAAAACTTTAAGTGATTCTGGAAATGAGTTGGCAATCCCAAAGGACTCTGAATCCAAGAATGTGGCTGACCCTGAACATGGAATGAGAGTAAAAGATGCTGAATTTAAGACTTTGAGTGATTCTGGAAATGGGTTGGCAATCCCGGAGAACTCTGAATCCAAGAATGTGGCTGATCCTGAACCTGGAATGAGTGTAAAAGATCCTGAATCCCAGACTTTGAGTGATTCTGGAAATGAGTTGGCAATCCCAAAAGACTCTGAATCCAAGAATGTGACTGATCCTGAACATGAAGATCCTGAATCCAAGACTTTGAGTGATTCTGAAAATGGGTTGGCGTTCATTATGACCAGAAATGCACATGTTGTTATTTTAGATAGTGCCACTGGCAATATGATCAGGTCTTGGCCCATGCATCCAAAAATGGATTCTACTGCGATTTCGATGTACATTATAGAGGATGGTGATGTTTTATTTGATTTGTCGAGTGCAAAAAAGGATTCTTTAGACTTACCTCAGAAAGGCGTAGCTAAACATGATGACGTACCACCTAATGCTGACTCTGGAGGGACACAGCTTGTAGTTGACCAGGATACCTCCACCAAAACTGCATATTTTTTGCAGAGATCGGTGAACATGTGTGTTTTACTTTGTTGTGACTACACATTGCACTTATGTTCATTGAAGTCTCTGCTTGAGGGTGATAGTAACTGCATTCTGAAGGTGAATCTTGTAAAACCGTGTTGTTGGACTACAATCTTCAAAAAAGATGGAAAAGACAGTGGATTGGTTATACTAAATCAGACAGGAGTCTTTGAGATCAGGTCTTTTCCAAATCTTGAAGTGGTCAGAGATATATCATTAATGACGATTCTAAGATGGAACTTCGTGATCAACATGGATAAGACATTCTGTTCCTCTGATCGTGGGCAAATGATTCTGGTACATGGGTGTGAATTAGCTTTTGTATCTCTTTTGGCCTACGAAGATGACTTCAGGATTTCGGAGTCCTTCCCTTGTCTTCATGATAAAGTGCTTGCAGCTGCTACAGATGTCATTGCTGATTTATCTCAAAGACAGAAACAGAGTGCTGCCCATAGGATTTTAGGAGGTATCATTAAGGGCTTAAAAACTGGTAAAACGGATCAAAACATGGACCCGACTGGAAATCATGAAAAATATTGTGCGAATTTGGAGAGCTTATTTTCAAATCCCCCATTCTTAAAACCTTCCACAGATGTGAAGGATGGCCAAGAACCCGTGGTGCTTAACCTAGATGATATTGTAATTGATGGCCCTATTACTGTCTTGCCTAAAGATCCAAACAAGAAGAATGAAAAGAAAGACAAGGGATCAGAGAAGAAAAAGTTATTTGAAGGCGCAACTAGTGATACAAAGCCAAAAATGAGGACAGCTGCAGAAATCAAGGCTAAATATAGAGAAACTGGGGATGTCTCTGCAGCAGCTGCACGTGCAAGAGATATGCTTGCCGAACGTGGGGAAAAACTTGAGAAACTCAGAGAAAACACAGAAGAACTATCGAGTGGAGCTCAAGACTTCGCATCGATGGCAAAGGAACTCGCCAAGAGAATGGAGAATCGTAAATGGTGGCACATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0002791 GO:0002792 GO:0002793 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0008047 GO:0008150 GO:0010646 GO:0010648 GO:0010817 GO:0016020 GO:0017016 GO:0017137 GO:0017157 GO:0019899 GO:0019905 GO:0023051 GO:0023057 GO:0030234 GO:0030695 GO:0031267 GO:0032879 GO:0032880 GO:0033500 GO:0042592 GO:0042593 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044464 GO:0046676 GO:0046883 GO:0046888 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048878 GO:0050708 GO:0050709 GO:0050714 GO:0050789 GO:0050790 GO:0050794 GO:0050796 GO:0051020 GO:0051046 GO:0051047 GO:0051048 GO:0051049 GO:0051050 GO:0051051 GO:0051222 GO:0051223 GO:0051224 GO:0051336 GO:0051345 GO:0060589 GO:0060627 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071944 GO:0090087 GO:0090276 GO:0090278 GO:0098772 GO:1903530 GO:1903531 GO:1903532 GO:1904950 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANAPC4_WD40 Synaptobrevin

Protein Analysis

1249

Amino Acids

137.3

Weight (kDa)

5.37

Isoelectric Point (pI)

37.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Synaptobrevin	PF00957	1204 - 1246	2e-06	Synaptobrevin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05570 AT5G05570
fragaria_vesca	FvH4_6g11290 FvH4_6g11290 FvH4_6g11290 FvH4_7g24600 FvH4_7g24600
malus_domestica	MD01G1154200.v1.1 MD04G1155600.v1.1 MD07G1223200.v1.1 MD12G1168800.v1.1
prunus_persica	Prupe.2G251300_v2.0.a1 Prupe.6G279100_v2.0.a1 Prupe.6G279100_v2.0.a1
pyrus_communis	pycom01g17150 pycom04g14030 pycom12g16030
rosa_chinensis	RchiOBHm_Chr1g0370431 RchiOBHm_Chr3g0462831
rosa_laevigata	RLG00000024829 RLG00000027044
rosa_multiflora	Rmu_sc0000766.1_g000011 Rmu_sc0005656.1_g000008 Rmu_sc0035228.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286580 Rroxscaffold_6G00417170
rosa_rugosa	Rorug01G0356400 Rorug01G0356500 Rorug01G0356600 Rorug03G0059500 Rorug03G0059500
rosa_samantha	Rh1AG364900 Rh1BG328100 Rh1CG341100 Rh1DG358400 Rh3AG117600 Rh3BG121400 Rh3CG124300 Rh3DG123000
rosa_wichuraiana	Rw1G032160 Rw3G009970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	531
AccB1I	GGYRCC	1 cut(s)	386
AccB7I	CCANNNNNTGG	1 cut(s)	1004
AccI	GTMKAC	1 cut(s)	716
AcoI	YGGCCR	2 cut(s)	1933, 3379
AcsI	RAATTY	8 cut(s)	300, 1364, 1531, 1688, 1897, 2086, 2234, 3319
AcuI	CTGAAG	4 cut(s)	903, 903, 2870, 3109
AcvI	CACGTG	1 cut(s)	3602
AdeI	CACNNNGTG	1 cut(s)	1789
AfaI	GTAC	5 cut(s)	1283, 1960, 2579, 2676, 3075
AfiI	CCNNNNNNNGG	7 cut(s)	1004, 1496, 2105, 2210, 2315, 2651, 3627
AflIII	ACRYGT	3 cut(s)	396, 2491, 2766
AhlI	ACTAGT	1 cut(s)	3515
AjnI	CCWGG	4 cut(s)	165, 720, 2314, 2718
AjuI	GAANNNNNNNTTGG	4 cut(s)	1223, 1255, 2542, 2574
AleI	CACNNNNGTG	2 cut(s)	1850, 3368
AloI	GAACNNNNNNTCC	2 cut(s)	2273, 2305
Alw21I	GWGCWC	2 cut(s)	1847, 3682
Alw44I	GTGCAC	1 cut(s)	1843
AlwNI	CAGNNNCTG	2 cut(s)	1004, 3596
AoxI	GGCC	9 cut(s)	234, 844, 1487, 1835, 1933, 2537, 3108, 3379, 3424
ApaLI	GTGCAC	1 cut(s)	1843
ApeKI	GCWGC	8 cut(s)	1001, 3170, 3173, 3221, 3545, 3590, 3593, 3596
ApoI	RAATTY	8 cut(s)	300, 1364, 1531, 1688, 1897, 2086, 2234, 3319
AseI	ATTAAT	1 cut(s)	2993
Asp700I	GAANNNNTTC	4 cut(s)	210, 888, 1340, 1533
AspA2I	CCTAGG	1 cut(s)	839
AspLEI	GCGC	1 cut(s)	3512
AspS9I	GGNCC	8 cut(s)	520, 844, 955, 1631, 1835, 2538, 3286, 3425
AsuC2I	CCSGG	2 cut(s)	1937, 2276
AvaII	GGWCC	4 cut(s)	520, 955, 1631, 3286
AvrII	CCTAGG	1 cut(s)	839
AxyI	CCTNAGG	2 cut(s)	48, 1635
BaeGI	GKGCMC	1 cut(s)	1847
BaeI	ACNNNNGTAYC	2 cut(s)	3065, 3098
BalI	TGGCCA	1 cut(s)	3381
BamHI	GGATCC	1 cut(s)	76
BanI	GGYRCC	1 cut(s)	386
BanII	GRGCYC	3 cut(s)	2066, 2075, 3682
BbrPI	CACGTG	1 cut(s)	3602
BbsI	GAAGAC	2 cut(s)	909, 3143
Bbv12I	GWGCWC	2 cut(s)	1847, 3682
BbvCI	CCTCAGC	1 cut(s)	1219
BbvI	GCAGC	8 cut(s)	1013, 3160, 3182, 3208, 3532, 3583, 3602, 3605
BciT130I	CCWGG	4 cut(s)	167, 722, 2316, 2720
BciVI	GTATCC	1 cut(s)	2716
BclI	TGATCA	2 cut(s)	2526, 3021
BcnI	CCSGG	2 cut(s)	1937, 2276
BcuI	ACTAGT	1 cut(s)	3515
BfaI	CTAG	6 cut(s)	279, 764, 840, 1263, 3404, 3516
BfmI	CTRYAG	6 cut(s)	1128, 1626, 1656, 3177, 3546, 3588
BfuAI	ACCTGC	1 cut(s)	531
BfuI	GTATCC	1 cut(s)	2716
BglI	GCCNNNNNGGC	1 cut(s)	2070
BglII	AGATCT	2 cut(s)	731, 1652
BisI	GCNGC	8 cut(s)	1002, 3171, 3174, 3222, 3546, 3591, 3594, 3597
BlnI	CCTAGG	1 cut(s)	839
BlsI	GCNGC	8 cut(s)	1003, 3172, 3175, 3223, 3547, 3592, 3595, 3598
Bme1390I	CCNGG	6 cut(s)	167, 722, 1937, 2276, 2316, 2720
Bme18I	GGWCC	4 cut(s)	520, 955, 1631, 3286
BmgT120I	GGNCC	8 cut(s)	520, 844, 955, 1631, 1835, 2538, 3286, 3425
BmiI	GGNNCC	6 cut(s)	78, 163, 388, 514, 845, 3288
BmrFI	CCNGG	6 cut(s)	167, 722, 1937, 2276, 2316, 2720
BmrI	ACTGGG	2 cut(s)	2003, 3585
BmuI	ACTGGG	2 cut(s)	2003, 3585
BoxI	GACNNNNGTC	1 cut(s)	2939
BpiI	GAAGAC	2 cut(s)	909, 3143
BplI	GAGNNNNNCTC	6 cut(s)	608, 640, 1312, 1344, 3664, 3696
BpmI	CTGGAG	1 cut(s)	2715
Bpu10I	CCTNAGC	2 cut(s)	225, 1219
BpuEI	CTTGAG	5 cut(s)	271, 1984, 2846, 3659, 3666
BpuMI	CCSGG	2 cut(s)	1937, 2276
Bsa29I	ATCGAT	2 cut(s)	119, 3695
BsaAI	YACGTR	1 cut(s)	3602
BsaBI	GATNNNNATC	1 cut(s)	75
BsaJI	CCNNGG	7 cut(s)	165, 516, 720, 839, 1230, 1838, 3390
BsaXI	ACNNNNNCTCC	2 cut(s)	1976, 2006
Bsc4I	CCNNNNNNNGG	7 cut(s)	1004, 1496, 2105, 2210, 2315, 2651, 3627
Bse118I	RCCGGY	1 cut(s)	335
Bse1I	ACTGG	7 cut(s)	815, 1501, 2009, 2521, 3268, 3298, 3580
Bse21I	CCTNAGG	2 cut(s)	48, 1635
Bse3DI	GCAATG	7 cut(s)	426, 1017, 1028, 1269, 1950, 2795, 3186
Bse8I	GATNNNNATC	1 cut(s)	75
BseBI	CCWGG	4 cut(s)	167, 722, 2316, 2720
BseCI	ATCGAT	2 cut(s)	119, 3695
BseDI	CCNNGG	7 cut(s)	165, 516, 720, 839, 1230, 1838, 3390
BseGI	GGATG	9 cut(s)	43, 175, 484, 835, 1597, 2545, 2596, 3382, 3586
BseJI	GATNNNNATC	1 cut(s)	75
BseLI	CCNNNNNNNGG	7 cut(s)	1004, 1496, 2105, 2210, 2315, 2651, 3627
BseMI	GCAATG	7 cut(s)	426, 1017, 1028, 1269, 1950, 2795, 3186
BseNI	ACTGG	7 cut(s)	815, 1501, 2009, 2521, 3268, 3298, 3580
BseRI	GAGGAG	1 cut(s)	1207
BseSI	GKGCMC	1 cut(s)	1847
BseXI	GCAGC	8 cut(s)	1013, 3160, 3182, 3208, 3532, 3583, 3602, 3605
BseYI	CCCAGC	1 cut(s)	1508
BsgI	GTGCAG	2 cut(s)	1154, 3582
BshFI	GGCC	9 cut(s)	236, 846, 1489, 1837, 1935, 2539, 3110, 3381, 3426
BshNI	GGYRCC	1 cut(s)	386
BshVI	ATCGAT	2 cut(s)	119, 3695
BsiHKAI	GWGCWC	2 cut(s)	1847, 3682
BsiSI	CCGG	3 cut(s)	336, 1936, 2276
BslFI	GGGAC	3 cut(s)	1068, 1138, 2713
BslI	CCNNNNNNNGG	7 cut(s)	1004, 1496, 2105, 2210, 2315, 2651, 3627
BsmFI	GGGAC	3 cut(s)	1068, 1138, 2713
BsmI	GAATGC	2 cut(s)	359, 2844
BsnI	GGCC	9 cut(s)	236, 846, 1489, 1837, 1935, 2539, 3110, 3381, 3426
Bsp1286I	GDGCHC	4 cut(s)	1847, 2066, 2075, 3682
Bsp1407I	TGTACA	1 cut(s)	2577
BspANI	GGCC	9 cut(s)	236, 846, 1489, 1837, 1935, 2539, 3110, 3381, 3426
BspDI	ATCGAT	2 cut(s)	119, 3695
BspHI	TCATGA	2 cut(s)	3154, 3301
BspLI	GGNNCC	6 cut(s)	78, 163, 388, 514, 845, 3288
BspMAI	CTGCAG	3 cut(s)	1132, 3550, 3592
BspMI	ACCTGC	1 cut(s)	531
BspT107I	GGYRCC	1 cut(s)	386
BsrDI	GCAATG	7 cut(s)	426, 1017, 1028, 1269, 1950, 2795, 3186
BsrFI	RCCGGY	1 cut(s)	335
BsrGI	TGTACA	1 cut(s)	2577
BsrI	ACTGG	7 cut(s)	815, 1501, 2009, 2521, 3268, 3298, 3580
BssAI	RCCGGY	1 cut(s)	335
BssECI	CCNNGG	7 cut(s)	165, 516, 720, 839, 1230, 1838, 3390
BssT1I	CCWWGG	3 cut(s)	516, 839, 1230
Bst2UI	CCWGG	4 cut(s)	167, 722, 2316, 2720
Bst6I	CTCTTC	3 cut(s)	20, 1387, 1398
BstAPI	GCANNNNNTGC	4 cut(s)	148, 1007, 1187, 3596
BstAUI	TGTACA	1 cut(s)	2577
BstBAI	YACGTR	1 cut(s)	3602
BstC8I	GCNNGC	7 cut(s)	140, 149, 153, 1081, 1188, 3168, 3618
BstDSI	CCRYGG	1 cut(s)	3390
BstENI	CCTNNNNNAGG	1 cut(s)	2649
BstF5I	GGATG	9 cut(s)	43, 175, 484, 835, 1597, 2545, 2596, 3382, 3586
BstHHI	GCGC	1 cut(s)	3512
BstMWI	GCNNNNNNNGC	8 cut(s)	144, 148, 1007, 1187, 2070, 3596, 3602, 3698
BstNI	CCWGG	4 cut(s)	167, 722, 2316, 2720
BstNSI	RCATGY	4 cut(s)	400, 1067, 2495, 2770
BstPAI	GACNNNNGTC	1 cut(s)	2939
BstSCI	CCNGG	6 cut(s)	165, 720, 1935, 2274, 2314, 2718
BstSFI	CTRYAG	6 cut(s)	1128, 1626, 1656, 3177, 3546, 3588
BstSLI	GKGCMC	1 cut(s)	1847
BstV1I	GCAGC	8 cut(s)	1013, 3160, 3182, 3208, 3532, 3583, 3602, 3605
BstV2I	GAAGAC	2 cut(s)	909, 3143
BstX2I	RGATCY	7 cut(s)	76, 731, 1574, 1652, 2332, 2425, 3448
BstXI	CCANNNNNNTGG	3 cut(s)	2194, 2299, 3721
BstYI	RGATCY	7 cut(s)	76, 731, 1574, 1652, 2332, 2425, 3448
Bsu15I	ATCGAT	2 cut(s)	119, 3695
Bsu36I	CCTNAGG	2 cut(s)	48, 1635
BsuI	GTATCC	1 cut(s)	2716
BsuRI	GGCC	9 cut(s)	236, 846, 1489, 1837, 1935, 2539, 3110, 3381, 3426
BsuTUI	ATCGAT	2 cut(s)	119, 3695
BtgI	CCRYGG	1 cut(s)	3390
BtgZI	GCGATG	1 cut(s)	657
BtsCI	GGATG	9 cut(s)	43, 175, 484, 835, 1597, 2545, 2596, 3382, 3586
BtsI	GCAGTG	1 cut(s)	1137
BtsIMutI	CAGTG	6 cut(s)	353, 808, 1137, 1993, 2514, 2917
BveI	ACCTGC	1 cut(s)	531
Cac8I	GCNNGC	7 cut(s)	140, 149, 153, 1081, 1188, 3168, 3618
CaiI	CAGNNNCTG	2 cut(s)	1004, 3596
CciI	TCATGA	2 cut(s)	3154, 3301
CfoI	GCGC	1 cut(s)	3512
Cfr10I	RCCGGY	1 cut(s)	335
Cfr13I	GGNCC	8 cut(s)	520, 844, 955, 1631, 1835, 2538, 3286, 3425
ClaI	ATCGAT	2 cut(s)	119, 3695
Csp6I	GTAC	5 cut(s)	1282, 1959, 2578, 2675, 3074
CviQI	GTAC	5 cut(s)	1282, 1959, 2578, 2675, 3074
DraI	TTTAAA	2 cut(s)	241, 1707
DraIII	CACNNNGTG	1 cut(s)	1789
EaeI	YGGCCR	2 cut(s)	1933, 3379
Eam1104I	CTCTTC	3 cut(s)	20, 1387, 1398
EarI	CTCTTC	3 cut(s)	20, 1387, 1398
Ecl136II	GAGCTC	1 cut(s)	3680
Eco130I	CCWWGG	3 cut(s)	516, 839, 1230
Eco24I	GRGCYC	3 cut(s)	2066, 2075, 3682
Eco32I	GATATC	2 cut(s)	219, 1565
Eco47I	GGWCC	4 cut(s)	520, 955, 1631, 3286
Eco53kI	GAGCTC	1 cut(s)	3680
Eco57I	CTGAAG	4 cut(s)	903, 903, 2870, 3109
Eco72I	CACGTG	1 cut(s)	3602
Eco81I	CCTNAGG	2 cut(s)	48, 1635
EcoICRI	GAGCTC	1 cut(s)	3680
EcoNI	CCTNNNNNAGG	1 cut(s)	2649
EcoO109I	RGGNCCY	2 cut(s)	520, 1631
EcoRI	GAATTC	2 cut(s)	1364, 2086
EcoRII	CCWGG	4 cut(s)	165, 720, 2314, 2718
EcoRV	GATATC	2 cut(s)	219, 1565
EcoT14I	CCWWGG	3 cut(s)	516, 839, 1230
EcoT22I	ATGCAT	2 cut(s)	944, 2547
EcoT38I	GRGCYC	3 cut(s)	2066, 2075, 3682
ErhI	CCWWGG	3 cut(s)	516, 839, 1230
FalI	AAGNNNNNCTT	2 cut(s)	486, 518
FaqI	GGGAC	3 cut(s)	1068, 1138, 2713
FauNDI	CATATG	2 cut(s)	451, 3746
FbaI	TGATCA	2 cut(s)	2526, 3021
FblI	GTMKAC	1 cut(s)	716
Fnu4HI	GCNGC	8 cut(s)	1002, 3171, 3174, 3222, 3546, 3591, 3594, 3597
FokI	GGATG	9 cut(s)	30, 182, 491, 822, 1604, 2532, 2603, 3389, 3593
FriOI	GRGCYC	3 cut(s)	2066, 2075, 3682
Fsp4HI	GCNGC	8 cut(s)	1002, 3171, 3174, 3222, 3546, 3591, 3594, 3597
FspBI	CTAG	6 cut(s)	279, 764, 840, 1263, 3404, 3516
GlaI	GCGC	1 cut(s)	3511
GluI	GCNGC	8 cut(s)	1002, 3171, 3174, 3222, 3546, 3591, 3594, 3597
GsaI	CCCAGC	1 cut(s)	1512
GsuI	CTGGAG	1 cut(s)	2715
HaeIII	GGCC	9 cut(s)	236, 846, 1489, 1837, 1935, 2539, 3110, 3381, 3426
HapII	CCGG	3 cut(s)	336, 1936, 2276
HhaI	GCGC	1 cut(s)	3512
Hin6I	GCGC	1 cut(s)	3510
HinP1I	GCGC	1 cut(s)	3510
HincII	GTYRAC	2 cut(s)	1441, 2716
HindII	GTYRAC	2 cut(s)	1441, 2716
HindIII	AAGCTT	1 cut(s)	1184
HpaII	CCGG	3 cut(s)	336, 1936, 2276
Hpy166II	GTNNAC	6 cut(s)	717, 955, 1441, 1845, 2716, 2764
Hpy8I	GTNNAC	6 cut(s)	717, 955, 1441, 1845, 2716, 2764
Hpy99I	CGWCG	1 cut(s)	1615
HpyCH4IV	ACGT	4 cut(s)	1145, 2673, 3601, 3625
HpyF10VI	GCNNNNNNNGC	8 cut(s)	144, 148, 1007, 1187, 2070, 3596, 3602, 3698
HpySE526I	ACGT	4 cut(s)	1145, 2673, 3601, 3625
HspAI	GCGC	1 cut(s)	3510
Ksp22I	TGATCA	2 cut(s)	2526, 3021
LmnI	GCTCC	2 cut(s)	1904, 3677
Lsp1109I	GCAGC	8 cut(s)	1013, 3160, 3182, 3208, 3532, 3583, 3602, 3605
MaeI	CTAG	6 cut(s)	279, 764, 840, 1263, 3404, 3516
MaeII	ACGT	4 cut(s)	1145, 2673, 3601, 3625
MaeIII	GTNAC	7 cut(s)	60, 1247, 1265, 1789, 2404, 2786, 2837
MfeI	CAATTG	1 cut(s)	156
MflI	RGATCY	7 cut(s)	76, 731, 1574, 1652, 2332, 2425, 3448
MhlI	GDGCHC	4 cut(s)	1847, 2066, 2075, 3682
MlsI	TGGCCA	1 cut(s)	3381
MluNI	TGGCCA	1 cut(s)	3381
MlyI	GAGTC	7 cut(s)	722, 1321, 2171, 2381, 2684, 2949, 3146
MmeI	TCCRAC	3 cut(s)	1628, 2019, 2858
Mox20I	TGGCCA	1 cut(s)	3381
Mph1103I	ATGCAT	2 cut(s)	944, 2547
MroXI	GAANNNNTTC	4 cut(s)	210, 888, 1340, 1533
MscI	TGGCCA	1 cut(s)	3381
MslI	CAYNNNNRTG	4 cut(s)	1068, 1850, 3081, 3368
Msp20I	TGGCCA	1 cut(s)	3381
MspA1I	CMGCKG	5 cut(s)	1004, 1850, 3173, 3545, 3596
MspI	CCGG	3 cut(s)	336, 1936, 2276
MspR9I	CCNGG	6 cut(s)	167, 722, 1937, 2276, 2316, 2720
MunI	CAATTG	1 cut(s)	156
Mva1269I	GAATGC	2 cut(s)	359, 2844
MvaI	CCWGG	4 cut(s)	167, 722, 2316, 2720
MwoI	GCNNNNNNNGC	8 cut(s)	144, 148, 1007, 1187, 2070, 3596, 3602, 3698
NciI	CCSGG	2 cut(s)	1937, 2276
NdeI	CATATG	2 cut(s)	451, 3746
NlaIV	GGNNCC	6 cut(s)	78, 163, 388, 514, 845, 3288
NmeAIII	GCCGAG	1 cut(s)	1309
NmuCI	GTSAC	5 cut(s)	60, 1247, 1789, 2404, 2786
NsiI	ATGCAT	2 cut(s)	944, 2547
NspI	RCATGY	4 cut(s)	400, 1067, 2495, 2770
OliI	CACNNNNGTG	2 cut(s)	1850, 3368
PagI	TCATGA	2 cut(s)	3154, 3301
PciI	ACATGT	3 cut(s)	396, 2491, 2766
PctI	GAATGC	2 cut(s)	359, 2844
PdmI	GAANNNNTTC	4 cut(s)	210, 888, 1340, 1533
PflFI	GACNNNGTC	1 cut(s)	1988
PflMI	CCANNNNNTGG	1 cut(s)	1004
PfoI	TCCNGGA	1 cut(s)	2274
PkrI	GCNGC	8 cut(s)	1003, 3172, 3175, 3223, 3547, 3592, 3595, 3598
PleI	GAGTC	7 cut(s)	721, 1321, 2171, 2381, 2684, 2948, 3145
PmaCI	CACGTG	1 cut(s)	3602
PmlI	CACGTG	1 cut(s)	3602
PpsI	GAGTC	7 cut(s)	721, 1321, 2171, 2381, 2684, 2948, 3145
Ppu21I	YACGTR	1 cut(s)	3602
PpuMI	RGGWCCY	2 cut(s)	520, 1631
PscI	ACATGT	3 cut(s)	396, 2491, 2766
PshAI	GACNNNNGTC	1 cut(s)	2939
PshBI	ATTAAT	1 cut(s)	2993
Psp124BI	GAGCTC	1 cut(s)	3682
Psp5II	RGGWCCY	2 cut(s)	520, 1631
Psp6I	CCWGG	4 cut(s)	165, 720, 2314, 2718
PspCI	CACGTG	1 cut(s)	3602
PspFI	CCCAGC	1 cut(s)	1508
PspGI	CCWGG	4 cut(s)	165, 720, 2314, 2718
PspN4I	GGNNCC	6 cut(s)	78, 163, 388, 514, 845, 3288
PspPI	GGNCC	8 cut(s)	520, 844, 955, 1631, 1835, 2538, 3286, 3425
PspPPI	RGGWCCY	2 cut(s)	520, 1631
PstI	CTGCAG	3 cut(s)	1132, 3550, 3592
PstNI	CAGNNNCTG	2 cut(s)	1004, 3596
PsuI	RGATCY	7 cut(s)	76, 731, 1574, 1652, 2332, 2425, 3448
PsyI	GACNNNGTC	1 cut(s)	1988
PvuII	CAGCTG	5 cut(s)	1004, 1850, 3173, 3545, 3596
RsaI	GTAC	5 cut(s)	1283, 1960, 2579, 2676, 3075
RsaNI	GTAC	5 cut(s)	1282, 1959, 2578, 2675, 3074
RseI	CAYNNNNRTG	4 cut(s)	1068, 1850, 3081, 3368
SacI	GAGCTC	1 cut(s)	3682
SatI	GCNGC	8 cut(s)	1002, 3171, 3174, 3222, 3546, 3591, 3594, 3597
Sau96I	GGNCC	8 cut(s)	520, 844, 955, 1631, 1835, 2538, 3286, 3425
SchI	GAGTC	7 cut(s)	722, 1321, 2171, 2381, 2684, 2949, 3146
ScrFI	CCNGG	6 cut(s)	167, 722, 1937, 2276, 2316, 2720
SduI	GDGCHC	4 cut(s)	1847, 2066, 2075, 3682
SfcI	CTRYAG	6 cut(s)	1128, 1626, 1656, 3177, 3546, 3588
SinI	GGWCC	4 cut(s)	520, 955, 1631, 3286
SmiMI	CAYNNNNRTG	4 cut(s)	1068, 1850, 3081, 3368
SmlI	CTYRAG	5 cut(s)	286, 1999, 2825, 3638, 3681
SmoI	CTYRAG	5 cut(s)	286, 1999, 2825, 3638, 3681
SpeI	ACTAGT	1 cut(s)	3515
SspI	AATATT	2 cut(s)	202, 3311
SspMI	CTAG	6 cut(s)	279, 764, 840, 1263, 3404, 3516
SstI	GAGCTC	1 cut(s)	3682
StyD4I	CCNGG	6 cut(s)	165, 720, 1935, 2274, 2314, 2718
StyI	CCWWGG	3 cut(s)	516, 839, 1230
TaiI	ACGT	4 cut(s)	1148, 2676, 3604, 3628
TaqI	TCGA	8 cut(s)	119, 1542, 1582, 2090, 2573, 2615, 3671, 3695
TatI	WGTACW	2 cut(s)	1958, 2577
TscAI	CASTG	6 cut(s)	353, 815, 1137, 1993, 2521, 2917
TseFI	GTSAC	5 cut(s)	60, 1247, 1789, 2404, 2786
TseI	GCWGC	8 cut(s)	1001, 3170, 3173, 3221, 3545, 3590, 3593, 3596
Tsp45I	GTSAC	5 cut(s)	60, 1247, 1789, 2404, 2786
TspGWI	ACGGA	2 cut(s)	1599, 3287
TspRI	CASTG	6 cut(s)	353, 815, 1137, 1993, 2521, 2917
Tth111I	GACNNNGTC	1 cut(s)	1988
Van91I	CCANNNNNTGG	1 cut(s)	1004
VneI	GTGCAC	1 cut(s)	1843
VpaK11BI	GGWCC	4 cut(s)	520, 955, 1631, 3286
VspI	ATTAAT	1 cut(s)	2993
XagI	CCTNNNNNAGG	1 cut(s)	2649
XapI	RAATTY	8 cut(s)	300, 1364, 1531, 1688, 1897, 2086, 2234, 3319
XceI	RCATGY	4 cut(s)	400, 1067, 2495, 2770
XmaJI	CCTAGG	1 cut(s)	839
XmiI	GTMKAC	1 cut(s)	716
XmnI	GAANNNNTTC	4 cut(s)	210, 888, 1340, 1533
XspI	CTAG	6 cut(s)	279, 764, 840, 1263, 3404, 3516
Zsp2I	ATGCAT	2 cut(s)	944, 2547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.