RchiOBHm_Chr1g0314761

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
2101550 .. 2102838
1289 bp
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UTR
Exon/CDS
Intron
PRQ54531

Sequence Viewer

Length: 186 bp
ATGTCCATTGAACTTCTTGATCCATCGGTGGAGGACTCTATCACTCTACATGAAGTTGTGCGACCGATTCATGTAGGTCTTTTATGTGTGCAACAAAAACCACAAGATAGGCCGAGTATGCCAGCTGCTGTTCTAATATTGAGTGGTGAAGGTGCATTGCCTCAACCTCAGAAGCCTGGAATTTGA

Protein Analysis

61

Amino Acids

6.55

Weight (kDa)

5.01

Isoelectric Point (pI)

70.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 14
AcsI RAATTY 1 cut(s) 180
AgsI TTSAA 1 cut(s) 11
AjnI CCWGG 1 cut(s) 175
AluBI AGCT 1 cut(s) 125
AluI AGCT 1 cut(s) 125
AlwI GGATC 1 cut(s) 14
AlwNI CAGNNNCTG 1 cut(s) 128
AoxI GGCC 1 cut(s) 110
ApeKI GCWGC 1 cut(s) 125
ApoI RAATTY 1 cut(s) 180
AsuHPI GGTGA 1 cut(s) 158
BbvI GCAGC 1 cut(s) 112
BccI CCATC 1 cut(s) 31
BciT130I CCWGG 1 cut(s) 177
BisI GCNGC 1 cut(s) 126
BlsI GCNGC 1 cut(s) 127
Bme1390I CCNGG 1 cut(s) 177
BmrFI CCNGG 1 cut(s) 177
Bse3DI GCAATG 1 cut(s) 155
BseBI CCWGG 1 cut(s) 177
BseMI GCAATG 1 cut(s) 155
BseMII CTCAG 1 cut(s) 182
BseXI GCAGC 1 cut(s) 112
Bsh1285I CGRYCG 1 cut(s) 65
BshFI GGCC 1 cut(s) 112
BsiEI CGRYCG 1 cut(s) 65
BsnI GGCC 1 cut(s) 112
Bsp143I GATC 1 cut(s) 19
BspANI GGCC 1 cut(s) 112
BspCNI CTCAG 1 cut(s) 181
BspPI GGATC 1 cut(s) 14
BsrDI GCAATG 1 cut(s) 155
BssMI GATC 1 cut(s) 19
Bst2UI CCWGG 1 cut(s) 177
BstC8I GCNNGC 1 cut(s) 123
BstDEI CTNAG 1 cut(s) 168
BstKTI GATC 1 cut(s) 22
BstMBI GATC 1 cut(s) 19
BstMCI CGRYCG 1 cut(s) 65
BstMWI GCNNNNNNNGC 1 cut(s) 118
BstNI CCWGG 1 cut(s) 177
BstSCI CCNGG 1 cut(s) 175
BstV1I GCAGC 1 cut(s) 112
BsuRI GGCC 1 cut(s) 112
Cac8I GCNNGC 1 cut(s) 123
CaiI CAGNNNCTG 1 cut(s) 128
CviAII CATG 2 cut(s) 50, 71
CviJI RGCY 3 cut(s) 112, 125, 175
CviKI_1 RGCY 3 cut(s) 112, 125, 175
DdeI CTNAG 1 cut(s) 168
DpnI GATC 1 cut(s) 21
DpnII GATC 1 cut(s) 19
EcoRII CCWGG 1 cut(s) 175
FaeI CATG 2 cut(s) 53, 74
FaiI YATR 4 cut(s) 51, 72, 85, 119
FatI CATG 2 cut(s) 49, 70
Fnu4HI GCNGC 1 cut(s) 126
Fsp4HI GCNGC 1 cut(s) 126
GluI GCNGC 1 cut(s) 126
HaeIII GGCC 1 cut(s) 112
Hin1II CATG 2 cut(s) 53, 74
HinfI GANTC 2 cut(s) 35, 67
HphI GGTGA 1 cut(s) 158
Hpy188I TCNGA 1 cut(s) 171
Hpy188III TCNNGA 1 cut(s) 17
HpyAV CCTTC 1 cut(s) 143
HpyCH4V TGCA 2 cut(s) 91, 155
HpyF10VI GCNNNNNNNGC 1 cut(s) 118
HpyF3I CTNAG 1 cut(s) 168
Hsp92II CATG 2 cut(s) 53, 74
Kzo9I GATC 1 cut(s) 19
LpnPI CCDG 2 cut(s) 135, 162
Lsp1109I GCAGC 1 cut(s) 112
MalI GATC 1 cut(s) 21
MboI GATC 1 cut(s) 19
MluCI AATT 1 cut(s) 180
MlyI GAGTC 1 cut(s) 29
MnlI CCTC 3 cut(s) 25, 171, 177
MspA1I CMGCKG 1 cut(s) 125
MspR9I CCNGG 1 cut(s) 177
MvaI CCWGG 1 cut(s) 177
MwoI GCNNNNNNNGC 1 cut(s) 118
NdeII GATC 1 cut(s) 19
NlaIII CATG 2 cut(s) 53, 74
NmeAIII GCCGAG 1 cut(s) 138
PfeI GAWTC 1 cut(s) 67
PkrI GCNGC 1 cut(s) 127
PleI GAGTC 1 cut(s) 29
PpsI GAGTC 1 cut(s) 29
Psp6I CCWGG 1 cut(s) 175
PspGI CCWGG 1 cut(s) 175
PstNI CAGNNNCTG 1 cut(s) 128
PvuII CAGCTG 1 cut(s) 125
SatI GCNGC 1 cut(s) 126
Sau3AI GATC 1 cut(s) 19
SchI GAGTC 1 cut(s) 29
ScrFI CCNGG 1 cut(s) 177
SetI ASST 4 cut(s) 79, 127, 154, 169
SgeI CNNG 6 cut(s) 29, 62, 83, 116, 126, 134
Sse9I AATT 1 cut(s) 180
SspI AATATT 1 cut(s) 138
StyD4I CCNGG 1 cut(s) 175
TaqII GACCGA 1 cut(s) 79
TasI AATT 1 cut(s) 180
TfiI GAWTC 1 cut(s) 67
TseI GCWGC 1 cut(s) 125
TspDTI ATGAA 2 cut(s) 59, 66
XapI RAATTY 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.