Rroxscaffold_1G00053240

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
74066197 .. 74070743
4547 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_1G00053240.1

Sequence Viewer

Length: 186 bp
ATGGGGAAGTGGTATCGAACAAAGGCCTCCAATAATCACTCAACGGACACCGAAATAAGGCGTAGCAAACTCGTAGATGGTTACATGTCCCCAAAATACACAATTGATGGTTTCTACTCGATAAAATCCGATGTCTACAACTATGGAGTTTTGGTTCTAGAGATAGTGAGTGGGAAGAGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

61

Amino Acids

7.05

Weight (kDa)

9.52

Isoelectric Point (pI)

50.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 135
AfiI CCNNNNNNNGG 1 cut(s) 57
AflIII ACRYGT 1 cut(s) 84
AloI GAACNNNNNNTCC 2 cut(s) 138, 170
AoxI GGCC 1 cut(s) 24
BccI CCATC 2 cut(s) 71, 101
BfaI CTAG 1 cut(s) 158
BsaXI ACNNNNNCTCC 2 cut(s) 138, 168
Bsc4I CCNNNNNNNGG 1 cut(s) 57
BseLI CCNNNNNNNGG 1 cut(s) 57
BshFI GGCC 1 cut(s) 26
BslFI GGGAC 1 cut(s) 73
BslI CCNNNNNNNGG 1 cut(s) 57
BsmFI GGGAC 1 cut(s) 73
BsnI GGCC 1 cut(s) 26
BspANI GGCC 1 cut(s) 26
Bst6I CTCTTC 1 cut(s) 170
BstNSI RCATGY 1 cut(s) 88
BsuRI GGCC 1 cut(s) 26
CviAII CATG 1 cut(s) 85
CviJI RGCY 1 cut(s) 26
CviKI_1 RGCY 1 cut(s) 26
Eam1104I CTCTTC 1 cut(s) 170
EarI CTCTTC 1 cut(s) 170
Eco147I AGGCCT 1 cut(s) 26
FaeI CATG 1 cut(s) 88
FaiI YATR 2 cut(s) 86, 144
FaqI GGGAC 1 cut(s) 73
FatI CATG 1 cut(s) 84
FblI GTMKAC 1 cut(s) 135
FspBI CTAG 1 cut(s) 158
HaeIII GGCC 1 cut(s) 26
Hin1II CATG 1 cut(s) 88
Hpy166II GTNNAC 1 cut(s) 136
Hpy188I TCNGA 1 cut(s) 130
Hpy188III TCNNGA 1 cut(s) 158
Hpy8I GTNNAC 1 cut(s) 136
Hsp92II CATG 1 cut(s) 88
MaeI CTAG 1 cut(s) 158
MaeIII GTNAC 1 cut(s) 80
MfeI CAATTG 1 cut(s) 102
MluCI AATT 1 cut(s) 102
MnlI CCTC 1 cut(s) 37
MunI CAATTG 1 cut(s) 102
NlaIII CATG 1 cut(s) 88
NspI RCATGY 1 cut(s) 88
PceI AGGCCT 1 cut(s) 26
PciI ACATGT 1 cut(s) 84
PscI ACATGT 1 cut(s) 84
SgeI CNNG 4 cut(s) 83, 97, 130, 170
Sse9I AATT 1 cut(s) 102
SseBI AGGCCT 1 cut(s) 26
SspMI CTAG 1 cut(s) 158
StuI AGGCCT 1 cut(s) 26
TaqI TCGA 2 cut(s) 16, 119
TasI AATT 1 cut(s) 102
TspGWI ACGGA 1 cut(s) 59
XbaI TCTAGA 1 cut(s) 157
XceI RCATGY 1 cut(s) 88
XmiI GTMKAC 1 cut(s) 135
XspI CTAG 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.