ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0465191 RchiOBHm_Chr3g0465811 RchiOBHm_Chr5g0019031 RchiOBHm_Chr5g0034941 RchiOBHm_Chr7g0195931 |
| rosa_laevigata | RLG00000024649 RLG00000027116 |
| rosa_multiflora | Rmu_sc0000148.1_g000031 Rmu_sc0001238.1_g000002 Rmu_sc0003823.1_g000007 Rmu_sc0007965.1_g000001 Rmu_sc0024363.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00054870 Rroxscaffold_1G00055810 Rroxscaffold_2G00105910 Rroxscaffold_2G00150290 Rroxscaffold_6G00419080 |
| rosa_rugosa | Rorug05G0401700 Rorug05G0401800 Rorug05G0401900 Rorug05G0401900 |
| rosa_samantha | Rh1CG177500 Rh1CG311700 Rh2AG050200 Rh3BG139900 Rh3CG141600 Rh3CG150000 Rh3DG141100 Rh4AG403900 Rh5CG224600 Rh5DG078700 Rh7AG321100 Rh7DG364900 |
| rosa_wichuraiana | Rw1G007010 Rw3G011460 Rw7G025010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 46 |
| AciI | CCGC | 6 cut(s) | 46, 65, 132, 155, 158, 167 |
| AfaI | GTAC | 2 cut(s) | 35, 202 |
| AluBI | AGCT | 2 cut(s) | 152, 182 |
| AluI | AGCT | 2 cut(s) | 152, 182 |
| AoxI | GGCC | 1 cut(s) | 212 |
| ApeKI | GCWGC | 5 cut(s) | 149, 152, 169, 182, 185 |
| AsuHPI | GGTGA | 1 cut(s) | 108 |
| BbvI | GCAGC | 5 cut(s) | 139, 156, 161, 169, 197 |
| BciVI | GTATCC | 1 cut(s) | 85 |
| BfmI | CTRYAG | 1 cut(s) | 183 |
| BfuI | GTATCC | 1 cut(s) | 85 |
| BisI | GCNGC | 8 cut(s) | 47, 150, 153, 156, 167, 170, 183, 186 |
| BlsI | GCNGC | 8 cut(s) | 48, 151, 154, 157, 168, 171, 184, 187 |
| BsaJI | CCNNGG | 1 cut(s) | 215 |
| BseDI | CCNNGG | 1 cut(s) | 215 |
| BseMII | CTCAG | 1 cut(s) | 60 |
| BseXI | GCAGC | 5 cut(s) | 139, 156, 161, 169, 197 |
| Bsh1236I | CGCG | 1 cut(s) | 46 |
| BshFI | GGCC | 1 cut(s) | 214 |
| BslFI | GGGAC | 2 cut(s) | 73, 140 |
| BsmFI | GGGAC | 2 cut(s) | 73, 140 |
| BsnI | GGCC | 1 cut(s) | 214 |
| Bsp143I | GATC | 1 cut(s) | 16 |
| BspACI | CCGC | 6 cut(s) | 46, 65, 132, 155, 158, 167 |
| BspANI | GGCC | 1 cut(s) | 214 |
| BspCNI | CTCAG | 1 cut(s) | 61 |
| BspFNI | CGCG | 1 cut(s) | 46 |
| BspMAI | CTGCAG | 1 cut(s) | 187 |
| BssECI | CCNNGG | 1 cut(s) | 215 |
| BssMI | GATC | 1 cut(s) | 16 |
| BssT1I | CCWWGG | 1 cut(s) | 215 |
| BstDEI | CTNAG | 1 cut(s) | 69 |
| BstEII | GGTNACC | 1 cut(s) | 114 |
| BstFNI | CGCG | 1 cut(s) | 46 |
| BstKTI | GATC | 1 cut(s) | 19 |
| BstMBI | GATC | 1 cut(s) | 16 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 155, 211 |
| BstPI | GGTNACC | 1 cut(s) | 114 |
| BstSFI | CTRYAG | 1 cut(s) | 183 |
| BstUI | CGCG | 1 cut(s) | 46 |
| BstV1I | GCAGC | 5 cut(s) | 139, 156, 161, 169, 197 |
| BsuI | GTATCC | 1 cut(s) | 85 |
| BsuRI | GGCC | 1 cut(s) | 214 |
| CseI | GACGC | 1 cut(s) | 52 |
| Csp6I | GTAC | 2 cut(s) | 34, 201 |
| CviAII | CATG | 1 cut(s) | 222 |
| CviJI | RGCY | 7 cut(s) | 7, 49, 152, 166, 182, 188, 214 |
| CviKI_1 | RGCY | 7 cut(s) | 7, 49, 152, 166, 182, 188, 214 |
| CviQI | GTAC | 2 cut(s) | 34, 201 |
| DdeI | CTNAG | 1 cut(s) | 69 |
| DpnI | GATC | 1 cut(s) | 18 |
| DpnII | GATC | 1 cut(s) | 16 |
| EciI | GGCGGA | 1 cut(s) | 173 |
| Eco130I | CCWWGG | 1 cut(s) | 215 |
| Eco147I | AGGCCT | 1 cut(s) | 214 |
| Eco91I | GGTNACC | 1 cut(s) | 114 |
| EcoO65I | GGTNACC | 1 cut(s) | 114 |
| EcoT14I | CCWWGG | 1 cut(s) | 215 |
| ErhI | CCWWGG | 1 cut(s) | 215 |
| FaeI | CATG | 1 cut(s) | 225 |
| FaiI | YATR | 2 cut(s) | 15, 223 |
| FaqI | GGGAC | 2 cut(s) | 73, 140 |
| FatI | CATG | 1 cut(s) | 221 |
| Fnu4HI | GCNGC | 8 cut(s) | 47, 150, 153, 156, 167, 170, 183, 186 |
| Fsp4HI | GCNGC | 8 cut(s) | 47, 150, 153, 156, 167, 170, 183, 186 |
| GluI | GCNGC | 8 cut(s) | 47, 150, 153, 156, 167, 170, 183, 186 |
| HaeIII | GGCC | 1 cut(s) | 214 |
| HgaI | GACGC | 1 cut(s) | 52 |
| Hin1II | CATG | 1 cut(s) | 225 |
| HphI | GGTGA | 1 cut(s) | 108 |
| Hpy166II | GTNNAC | 1 cut(s) | 201 |
| Hpy188I | TCNGA | 1 cut(s) | 84 |
| Hpy8I | GTNNAC | 1 cut(s) | 201 |
| Hpy99I | CGWCG | 1 cut(s) | 46 |
| HpyCH4V | TGCA | 1 cut(s) | 185 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 155, 211 |
| HpyF3I | CTNAG | 1 cut(s) | 69 |
| Hsp92II | CATG | 1 cut(s) | 225 |
| Kzo9I | GATC | 1 cut(s) | 16 |
| LpnPI | CCDG | 4 cut(s) | 81, 131, 132, 192 |
| Lsp1109I | GCAGC | 5 cut(s) | 139, 156, 161, 169, 197 |
| MaeIII | GTNAC | 1 cut(s) | 114 |
| MalI | GATC | 1 cut(s) | 18 |
| MboI | GATC | 1 cut(s) | 16 |
| MluCI | AATT | 1 cut(s) | 107 |
| MnlI | CCTC | 1 cut(s) | 148 |
| MseI | TTAA | 1 cut(s) | 110 |
| MspA1I | CMGCKG | 3 cut(s) | 152, 169, 182 |
| MvnI | CGCG | 1 cut(s) | 46 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 155, 211 |
| NdeII | GATC | 1 cut(s) | 16 |
| NlaIII | CATG | 1 cut(s) | 225 |
| NmuCI | GTSAC | 1 cut(s) | 114 |
| PceI | AGGCCT | 1 cut(s) | 214 |
| PkrI | GCNGC | 8 cut(s) | 48, 151, 154, 157, 168, 171, 184, 187 |
| PspEI | GGTNACC | 1 cut(s) | 114 |
| PstI | CTGCAG | 1 cut(s) | 187 |
| PvuII | CAGCTG | 2 cut(s) | 152, 182 |
| RsaI | GTAC | 2 cut(s) | 35, 202 |
| RsaNI | GTAC | 2 cut(s) | 34, 201 |
| SaqAI | TTAA | 1 cut(s) | 110 |
| SatI | GCNGC | 8 cut(s) | 47, 150, 153, 156, 167, 170, 183, 186 |
| Sau3AI | GATC | 1 cut(s) | 16 |
| SetI | ASST | 5 cut(s) | 116, 121, 140, 154, 184 |
| SfcI | CTRYAG | 1 cut(s) | 183 |
| SgeI | CNNG | 8 cut(s) | 43, 52, 57, 80, 108, 131, 158, 191 |
| Sse9I | AATT | 1 cut(s) | 107 |
| SseBI | AGGCCT | 1 cut(s) | 214 |
| SsiI | CCGC | 6 cut(s) | 46, 65, 132, 155, 158, 167 |
| StuI | AGGCCT | 1 cut(s) | 214 |
| StyI | CCWWGG | 1 cut(s) | 215 |
| TasI | AATT | 1 cut(s) | 107 |
| TauI | GCSGC | 3 cut(s) | 49, 158, 169 |
| Tru1I | TTAA | 1 cut(s) | 110 |
| Tru9I | TTAA | 1 cut(s) | 110 |
| TseFI | GTSAC | 1 cut(s) | 114 |
| TseI | GCWGC | 5 cut(s) | 149, 152, 169, 182, 185 |
| Tsp45I | GTSAC | 1 cut(s) | 114 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 142 |