Ankyrin repeat and kinase domain containing 1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0465191 RchiOBHm_Chr3g0465811 RchiOBHm_Chr5g0019031 RchiOBHm_Chr5g0034941 RchiOBHm_Chr7g0195931 |
| rosa_laevigata | RLG00000024649 RLG00000027116 |
| rosa_multiflora | Rmu_sc0000148.1_g000031 Rmu_sc0001238.1_g000002 Rmu_sc0003823.1_g000007 Rmu_sc0007965.1_g000001 Rmu_sc0024363.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00054870 Rroxscaffold_1G00055810 Rroxscaffold_2G00105910 Rroxscaffold_2G00150290 Rroxscaffold_6G00419080 |
| rosa_rugosa | Rorug05G0401700 Rorug05G0401800 Rorug05G0401900 Rorug05G0401900 |
| rosa_samantha | Rh1CG177500 Rh1CG311700 Rh2AG050200 Rh3BG139900 Rh3CG141600 Rh3CG150000 Rh3DG141100 Rh4AG403900 Rh5CG224600 Rh5DG078700 Rh7AG321100 Rh7DG364900 |
| rosa_wichuraiana | Rw1G007010 Rw3G011460 Rw7G025010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 47 |
| AccBSI | CCGCTC | 1 cut(s) | 16 |
| AccII | CGCG | 1 cut(s) | 25 |
| AciI | CCGC | 4 cut(s) | 8, 16, 25, 92 |
| AcuI | CTGAAG | 1 cut(s) | 62 |
| AcyI | GRCGYC | 1 cut(s) | 48 |
| AfaI | GTAC | 1 cut(s) | 174 |
| AspLEI | GCGC | 1 cut(s) | 50 |
| BanI | GGYRCC | 1 cut(s) | 47 |
| BanII | GRGCYC | 1 cut(s) | 23 |
| BccI | CCATC | 1 cut(s) | 59 |
| BfoI | RGCGCY | 1 cut(s) | 51 |
| BisI | GCNGC | 2 cut(s) | 9, 26 |
| BlsI | GCNGC | 2 cut(s) | 10, 27 |
| BmiI | GGNNCC | 1 cut(s) | 49 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 37 |
| BpuEI | CTTGAG | 1 cut(s) | 56 |
| BsaHI | GRCGYC | 1 cut(s) | 48 |
| Bse118I | RCCGGY | 1 cut(s) | 94 |
| Bse1I | ACTGG | 2 cut(s) | 64, 163 |
| BseNI | ACTGG | 2 cut(s) | 64, 163 |
| Bsh1236I | CGCG | 1 cut(s) | 25 |
| BshNI | GGYRCC | 1 cut(s) | 47 |
| BsiSI | CCGG | 1 cut(s) | 95 |
| Bsp1286I | GDGCHC | 1 cut(s) | 23 |
| Bsp1407I | TGTACA | 1 cut(s) | 172 |
| BspACI | CCGC | 4 cut(s) | 8, 16, 25, 92 |
| BspFNI | CGCG | 1 cut(s) | 25 |
| BspLI | GGNNCC | 1 cut(s) | 49 |
| BspT107I | GGYRCC | 1 cut(s) | 47 |
| BsrBI | CCGCTC | 1 cut(s) | 16 |
| BsrFI | RCCGGY | 1 cut(s) | 94 |
| BsrGI | TGTACA | 1 cut(s) | 172 |
| BsrI | ACTGG | 2 cut(s) | 64, 163 |
| BssAI | RCCGGY | 1 cut(s) | 94 |
| BssNI | GRCGYC | 1 cut(s) | 48 |
| BstACI | GRCGYC | 1 cut(s) | 48 |
| BstAUI | TGTACA | 1 cut(s) | 172 |
| BstC8I | GCNNGC | 2 cut(s) | 23, 96 |
| BstFNI | CGCG | 1 cut(s) | 25 |
| BstH2I | RGCGCY | 1 cut(s) | 51 |
| BstHHI | GCGC | 1 cut(s) | 50 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 22 |
| BstUI | CGCG | 1 cut(s) | 25 |
| BtgZI | GCGATG | 1 cut(s) | 177 |
| Cac8I | GCNNGC | 2 cut(s) | 23, 96 |
| CfoI | GCGC | 1 cut(s) | 50 |
| Cfr10I | RCCGGY | 1 cut(s) | 94 |
| Csp6I | GTAC | 1 cut(s) | 173 |
| CviJI | RGCY | 2 cut(s) | 21, 28 |
| CviKI_1 | RGCY | 2 cut(s) | 21, 28 |
| CviQI | GTAC | 1 cut(s) | 173 |
| DinI | GGCGCC | 1 cut(s) | 49 |
| Eco24I | GRGCYC | 1 cut(s) | 23 |
| Eco57I | CTGAAG | 1 cut(s) | 62 |
| EcoT22I | ATGCAT | 1 cut(s) | 185 |
| EcoT38I | GRGCYC | 1 cut(s) | 23 |
| EgeI | GGCGCC | 1 cut(s) | 49 |
| EheI | GGCGCC | 1 cut(s) | 49 |
| FaiI | YATR | 6 cut(s) | 143, 145, 177, 179, 181, 196 |
| FauI | CCCGC | 1 cut(s) | 9 |
| Fnu4HI | GCNGC | 2 cut(s) | 9, 26 |
| FriOI | GRGCYC | 1 cut(s) | 23 |
| Fsp4HI | GCNGC | 2 cut(s) | 9, 26 |
| GlaI | GCGC | 1 cut(s) | 49 |
| GluI | GCNGC | 2 cut(s) | 9, 26 |
| HaeII | RGCGCY | 1 cut(s) | 51 |
| HapII | CCGG | 1 cut(s) | 95 |
| HhaI | GCGC | 1 cut(s) | 50 |
| Hin1I | GRCGYC | 1 cut(s) | 48 |
| Hin6I | GCGC | 1 cut(s) | 48 |
| HinP1I | GCGC | 1 cut(s) | 48 |
| HpaII | CCGG | 1 cut(s) | 95 |
| Hpy166II | GTNNAC | 1 cut(s) | 124 |
| Hpy188I | TCNGA | 2 cut(s) | 33, 42 |
| Hpy188III | TCNNGA | 2 cut(s) | 55, 109 |
| Hpy8I | GTNNAC | 1 cut(s) | 124 |
| HpyAV | CCTTC | 1 cut(s) | 37 |
| HpyCH4V | TGCA | 1 cut(s) | 183 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 22 |
| Hsp92I | GRCGYC | 1 cut(s) | 48 |
| HspAI | GCGC | 1 cut(s) | 48 |
| KasI | GGCGCC | 1 cut(s) | 47 |
| KroI | GCCGGC | 1 cut(s) | 94 |
| KroNI | GCCGGC | 1 cut(s) | 96 |
| LpnPI | CCDG | 5 cut(s) | 45, 94, 108, 144, 183 |
| MbiI | CCGCTC | 1 cut(s) | 16 |
| MboII | GAAGA | 1 cut(s) | 124 |
| MhlI | GDGCHC | 1 cut(s) | 23 |
| Mly113I | GGCGCC | 1 cut(s) | 48 |
| MnlI | CCTC | 1 cut(s) | 93 |
| Mph1103I | ATGCAT | 1 cut(s) | 185 |
| MreI | CGCCGGCG | 1 cut(s) | 94 |
| MroNI | GCCGGC | 1 cut(s) | 94 |
| MspI | CCGG | 1 cut(s) | 95 |
| MvnI | CGCG | 1 cut(s) | 25 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 22 |
| NaeI | GCCGGC | 1 cut(s) | 96 |
| NarI | GGCGCC | 1 cut(s) | 48 |
| NgoMIV | GCCGGC | 1 cut(s) | 94 |
| NlaIV | GGNNCC | 1 cut(s) | 49 |
| NsiI | ATGCAT | 1 cut(s) | 185 |
| PdiI | GCCGGC | 1 cut(s) | 96 |
| PkrI | GCNGC | 2 cut(s) | 10, 27 |
| PluTI | GGCGCC | 1 cut(s) | 51 |
| PspN4I | GGNNCC | 1 cut(s) | 49 |
| RsaI | GTAC | 1 cut(s) | 174 |
| RsaNI | GTAC | 1 cut(s) | 173 |
| SatI | GCNGC | 2 cut(s) | 9, 26 |
| SduI | GDGCHC | 1 cut(s) | 23 |
| SetI | ASST | 1 cut(s) | 172 |
| SfoI | GGCGCC | 1 cut(s) | 49 |
| SgrAI | CRCCGGYG | 1 cut(s) | 94 |
| SmlI | CTYRAG | 1 cut(s) | 71 |
| SmoI | CTYRAG | 1 cut(s) | 71 |
| SsiI | CCGC | 4 cut(s) | 8, 16, 25, 92 |
| SspDI | GGCGCC | 1 cut(s) | 47 |
| TaqI | TCGA | 1 cut(s) | 56 |
| TatI | WGTACW | 1 cut(s) | 172 |
| TauI | GCSGC | 2 cut(s) | 11, 28 |
| TspDTI | ATGAA | 2 cut(s) | 17, 180 |
| Zsp2I | ATGCAT | 1 cut(s) | 185 |