ubiquitin-NEDD8-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G31340 AT2G35635 |
| fragaria_vesca | FvH4_3g15350 FvH4_6g21361 |
| malus_domestica | MD10G1205300.v1.1 MD12G1050500.v1.1 MD14G1049000.v1.1 |
| prunus_persica | Prupe.4G136400_v2.0.a1 Prupe.7G086300_v2.0.a1 |
| pyrus_communis | pycom10g17580 pycom12g04500 pycom14g04010 |
| rosa_chinensis | RchiOBHm_Chr0c32g0501481 RchiOBHm_Chr3g0477981 RchiOBHm_Chr3g0478131 RchiOBHm_Chr3g0478171 RchiOBHm_Chr3g0478321 RchiOBHm_Chr3g0478371 RchiOBHm_Chr3g0483791 RchiOBHm_Chr4g0426431 |
| rosa_laevigata | RLG00000032875 |
| rosa_multiflora | Rmu_sc0001218.1_g000001 Rmu_sc0001333.1_g000004 Rmu_sc0005657.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00403390 |
| rosa_rugosa | Rorug03G0165100 Rorug05G0088500 |
| rosa_samantha | Rh3AG215400 Rh3AG215900 |
| rosa_wichuraiana | Rw0G010130 Rw3G019400 Rw3G019430 Rw3G019480 Rw4G023230 Rw5G016380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 36 |
| AcsI | RAATTY | 1 cut(s) | 192 |
| AdeI | CACNNNGTG | 1 cut(s) | 308 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 166 |
| AjnI | CCWGG | 1 cut(s) | 63 |
| AluBI | AGCT | 1 cut(s) | 235 |
| AluI | AGCT | 1 cut(s) | 235 |
| AoxI | GGCC | 1 cut(s) | 157 |
| ApeKI | GCWGC | 1 cut(s) | 232 |
| ApoI | RAATTY | 1 cut(s) | 192 |
| AsuHPI | GGTGA | 2 cut(s) | 53, 112 |
| BbvCI | CCTCAGC | 1 cut(s) | 77 |
| BbvI | GCAGC | 1 cut(s) | 244 |
| BciT130I | CCWGG | 1 cut(s) | 65 |
| BfaI | CTAG | 2 cut(s) | 26, 293 |
| BisI | GCNGC | 1 cut(s) | 233 |
| BlsI | GCNGC | 1 cut(s) | 234 |
| Bme1390I | CCNGG | 1 cut(s) | 65 |
| BmrFI | CCNGG | 1 cut(s) | 65 |
| BmrI | ACTGGG | 1 cut(s) | 123 |
| BmuI | ACTGGG | 1 cut(s) | 123 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 263, 295 |
| Bpu10I | CCTNAGC | 1 cut(s) | 77 |
| BsaAI | YACGTR | 1 cut(s) | 308 |
| BsaWI | WCCGGW | 1 cut(s) | 199 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 166 |
| Bse1I | ACTGG | 1 cut(s) | 118 |
| BseBI | CCWGG | 1 cut(s) | 65 |
| BseGI | GGATG | 1 cut(s) | 39 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 166 |
| BseMII | CTCAG | 1 cut(s) | 68 |
| BseNI | ACTGG | 1 cut(s) | 118 |
| BseRI | GAGGAG | 1 cut(s) | 194 |
| BseXI | GCAGC | 1 cut(s) | 244 |
| BshFI | GGCC | 1 cut(s) | 159 |
| BsiSI | CCGG | 1 cut(s) | 200 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 166 |
| BsnI | GGCC | 1 cut(s) | 159 |
| BspANI | GGCC | 1 cut(s) | 159 |
| BspCNI | CTCAG | 1 cut(s) | 69 |
| BsrI | ACTGG | 1 cut(s) | 118 |
| Bst2UI | CCWGG | 1 cut(s) | 65 |
| Bst6I | CTCTTC | 1 cut(s) | 63 |
| BstBAI | YACGTR | 1 cut(s) | 308 |
| BstC8I | GCNNGC | 3 cut(s) | 226, 230, 300 |
| BstDEI | CTNAG | 1 cut(s) | 77 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 164 |
| BstF5I | GGATG | 1 cut(s) | 39 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 211 |
| BstNI | CCWGG | 1 cut(s) | 65 |
| BstSCI | CCNGG | 1 cut(s) | 63 |
| BstV1I | GCAGC | 1 cut(s) | 244 |
| BsuRI | GGCC | 1 cut(s) | 159 |
| BtsCI | GGATG | 1 cut(s) | 39 |
| Cac8I | GCNNGC | 3 cut(s) | 226, 230, 300 |
| CsiI | ACCWGGT | 1 cut(s) | 63 |
| CviJI | RGCY | 7 cut(s) | 10, 76, 107, 159, 214, 235, 279 |
| CviKI_1 | RGCY | 7 cut(s) | 10, 76, 107, 159, 214, 235, 279 |
| DdeI | CTNAG | 1 cut(s) | 77 |
| DraIII | CACNNNGTG | 1 cut(s) | 308 |
| Eam1104I | CTCTTC | 1 cut(s) | 63 |
| EarI | CTCTTC | 1 cut(s) | 63 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 164 |
| EcoRI | GAATTC | 1 cut(s) | 192 |
| EcoRII | CCWGG | 1 cut(s) | 63 |
| FaiI | YATR | 6 cut(s) | 36, 92, 137, 222, 264, 322 |
| Fnu4HI | GCNGC | 1 cut(s) | 233 |
| FokI | GGATG | 1 cut(s) | 26 |
| Fsp4HI | GCNGC | 1 cut(s) | 233 |
| FspBI | CTAG | 2 cut(s) | 26, 293 |
| GluI | GCNGC | 1 cut(s) | 233 |
| HaeIII | GGCC | 1 cut(s) | 159 |
| HapII | CCGG | 1 cut(s) | 200 |
| HincII | GTYRAC | 1 cut(s) | 54 |
| HindII | GTYRAC | 1 cut(s) | 54 |
| HinfI | GANTC | 1 cut(s) | 50 |
| HpaII | CCGG | 1 cut(s) | 200 |
| HphI | GGTGA | 2 cut(s) | 53, 112 |
| Hpy166II | GTNNAC | 1 cut(s) | 54 |
| Hpy8I | GTNNAC | 1 cut(s) | 54 |
| HpyAV | CCTTC | 2 cut(s) | 97, 296 |
| HpyCH4IV | ACGT | 1 cut(s) | 307 |
| HpyCH4V | TGCA | 2 cut(s) | 205, 302 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 211 |
| HpyF3I | CTNAG | 1 cut(s) | 77 |
| HpySE526I | ACGT | 1 cut(s) | 307 |
| LpnPI | CCDG | 6 cut(s) | 31, 50, 77, 99, 210, 213 |
| Lsp1109I | GCAGC | 1 cut(s) | 244 |
| MabI | ACCWGGT | 1 cut(s) | 63 |
| MaeI | CTAG | 2 cut(s) | 26, 293 |
| MaeII | ACGT | 1 cut(s) | 307 |
| MboII | GAAGA | 1 cut(s) | 50 |
| MluCI | AATT | 2 cut(s) | 123, 192 |
| MlyI | GAGTC | 1 cut(s) | 59 |
| MnlI | CCTC | 7 cut(s) | 66, 72, 77, 172, 181, 207, 265 |
| MseI | TTAA | 1 cut(s) | 96 |
| MspI | CCGG | 1 cut(s) | 200 |
| MspR9I | CCNGG | 1 cut(s) | 65 |
| MvaI | CCWGG | 1 cut(s) | 65 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 211 |
| PkrI | GCNGC | 1 cut(s) | 234 |
| PleI | GAGTC | 1 cut(s) | 58 |
| PpsI | GAGTC | 1 cut(s) | 58 |
| Ppu21I | YACGTR | 1 cut(s) | 308 |
| PsiI | TTATAA | 1 cut(s) | 36 |
| Psp6I | CCWGG | 1 cut(s) | 63 |
| PspGI | CCWGG | 1 cut(s) | 63 |
| SaqAI | TTAA | 1 cut(s) | 96 |
| SatI | GCNGC | 1 cut(s) | 233 |
| SchI | GAGTC | 1 cut(s) | 59 |
| ScrFI | CCNGG | 1 cut(s) | 65 |
| SetI | ASST | 4 cut(s) | 66, 102, 237, 310 |
| SexAI | ACCWGGT | 1 cut(s) | 63 |
| Sse9I | AATT | 2 cut(s) | 123, 192 |
| SspMI | CTAG | 2 cut(s) | 26, 293 |
| StyD4I | CCNGG | 1 cut(s) | 63 |
| TaiI | ACGT | 1 cut(s) | 310 |
| TasI | AATT | 2 cut(s) | 123, 192 |
| Tru1I | TTAA | 1 cut(s) | 96 |
| Tru9I | TTAA | 1 cut(s) | 96 |
| TseI | GCWGC | 1 cut(s) | 232 |
| TspDTI | ATGAA | 1 cut(s) | 278 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 164 |
| XapI | RAATTY | 1 cut(s) | 192 |
| XspI | CTAG | 2 cut(s) | 26, 293 |