Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003492

Physical Location & Seq

Genomic Coordinates Reverse (-)

13779222 .. 13784370

Gene Structure 5149 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0165100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGGATCATGAAGCACACTTGCGCAACAAGTTTGTCGACATGAAATCCCAAAGGGTGAAAGTGGAAGATTCATTTGCTCCTGCACTGGATGATGAAACCGAAACAATTGAGCACTTGCTTGCAGAACCTAAAACTGAATGTGTTACAGTAGATGGTGTCTTATGTTTTGGCAAGGAGAATGCAGAAAAATGCTTAAACTTTGATGATTTTTCTTCTGGATTTGACTATGGACTAAATACATATACTGGTGGGCGGCATTCTGCTCACCCTCGTGGGCCGCGTTCTGCTCATCCTCGCCAAGGAGACTATGAATTAGAACTTGGAGTTCTTGATGGATTGCTGGATGAAGTTGAAGAAGTGGAGGATATTCATGCAACAAATGGTCTTGCAAGTCCATGTGATGATTTTCTTCTAGATATTGGATTTACGGGGAAGGTTTCTGAACTGGAATTTGGTCCTTGTGAAAGATCACATCTTGGAAACTCTGAAAGTCGGTCTCCAGGGTTAAGTGGCAGTAGTAATAGTGCAGTAGGGGTTTCAGAATCGTCAACAGTGACAATTCAAGAATTTGAGTGCAAAAATCATTCTTGTCCCAAGGAATCACCTCATAAGTTGCCTGGTGACTTCAGGCGGAAAAAGAGACGTCAGGCACCAGTTGAAGGAAGTACCTGCCCTAGTTCATTCAGTTTACAAAATCTTGAAGAGTTAGATAATAATCAGAAACCTTTAGTAAGTGGATTATTGTCCAGTGAAAATGAGAAGAGCTCCGTTGAAGCAAACAAAATTGGTGCTATTATTAAGAAGAAAAGACTGCCTAAGACTACTCGGAGACTCGTTGAAGATTCTTCAAAAAGGAAAGCAAAAGATTTAATGGGAAGTGAAAATATTTCTCATCTTGCTGCTACAGATGATCAGTGCTTGAAGGCTAGATCTCAGAATAAACTTCATCATACAAGACCTATGACATTGTCGTCAGTTCCTGAGGAGGATTCAATTTCAGATAATCTGACGCTGTCTGAATTCAAGATTCGGGTAGCACGTCCAAAGAAGCAGGCAATTCGGACTGAATTTCAACCCATTACATCTGATTCTGAAGATGAAATTGTGAGAGTGACGATATCCGAAAAGCATGATCGAAGGAAGGATCAACCGATTAAATCCAAGTCTGACAATGAAACGGCGATCACGAAGATATCCAAAAAGCATGATCGAAGGAAGGATCAACATATTAAATCTGAGTCTGAAGATGAAACTGTGACAAGGAGAAGATCTACAAGGCATAATCGAAGGAAGCATCAGCCTATTAACTCCGAGTCAGAAGATGAGATTGTGAGAAAGAAAAGATCTAAAAAGCATGATCGAAGGAAGCATCAAAGGATGTGGGATGTCTCTGAGGTGATGGCATTGATTGATGGTATTTCTGAATATGGAGTTGGACAATGGACACGCATAAAGAGGCTTCTATTTACATCTTCTGCTTATCGCACACCAATAGATCTCAGGGACAAATGGAGAAATCTTCTGAGAAGTAGCTGTCGAAGGAAACTGAAGAAAGAGGATGAGGAAAACGAGGAGAATGACATGCATTTACCGAAGTCACTGATATACCGTGTCCGTGAGCTGGCAAAGAAACATCCATATCCAAGGCAGCGTGGTAAAAAGTGTTCCCCTGCCATACTCCCTGCTGAAAGCAAAGGTGCTTCATCTGACCTTATCATTAAGTATGTGAGAAGGAAGAACCGTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009692 GO:0009693 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0010817 GO:0016020 GO:0019538 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043412 GO:0043449 GO:0043450 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045116 GO:0050896 GO:0051603 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0071944 GO:1900673 GO:1900674 GO:1901564 GO:1901565 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ubiquitin

Protein Analysis

582

Amino Acids

66.32

Weight (kDa)

8.99

Isoelectric Point (pI)

62.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	461 - 508	6.3e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31340 AT2G35635
fragaria_vesca	FvH4_3g15350 FvH4_6g21361
malus_domestica	MD10G1205300.v1.1 MD12G1050500.v1.1 MD14G1049000.v1.1
prunus_persica	Prupe.4G136400_v2.0.a1 Prupe.7G086300_v2.0.a1
pyrus_communis	pycom10g17580 pycom12g04500 pycom14g04010
rosa_chinensis	RchiOBHm_Chr0c32g0501481 RchiOBHm_Chr3g0477981 RchiOBHm_Chr3g0478131 RchiOBHm_Chr3g0478171 RchiOBHm_Chr3g0478321 RchiOBHm_Chr3g0478371 RchiOBHm_Chr3g0483791 RchiOBHm_Chr4g0426431
rosa_laevigata	RLG00000032875
rosa_multiflora	Rmu_sc0001218.1_g000001 Rmu_sc0001333.1_g000004 Rmu_sc0005657.1_g000008
rosa_roxburghii	Rroxscaffold_6G00403390
rosa_rugosa	Rorug03G0165100 Rorug05G0088500
rosa_samantha	Rh3AG215400 Rh3AG215900
rosa_wichuraiana	Rw0G010130 Rw3G019400 Rw3G019430 Rw3G019480 Rw4G023230 Rw5G016380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	970
AatII	GACGTC	1 cut(s)	646
Acc16I	TGCGCA	1 cut(s)	23
Acc36I	ACCTGC	1 cut(s)	677
AccB1I	GGYRCC	1 cut(s)	649
AccI	GTMKAC	1 cut(s)	36
AccII	CGCG	1 cut(s)	280
AciI	CCGC	3 cut(s)	253, 278, 631
AclWI	GGATC	3 cut(s)	12, 1152, 1227
AcsI	RAATTY	4 cut(s)	449, 566, 1019, 1067
AcuI	CTGAAG	4 cut(s)	610, 1113, 1263, 1568
AcyI	GRCGYC	1 cut(s)	643
AfaI	GTAC	1 cut(s)	667
AfiI	CCNNNNNNNGG	3 cut(s)	299, 659, 1621
AjiI	CACGTC	1 cut(s)	1040
AjnI	CCWGG	2 cut(s)	499, 616
AjuI	GAANNNNNNNTTGG	6 cut(s)	303, 335, 435, 467, 1416, 1448
AleI	CACNNNNGTG	1 cut(s)	270
AloI	GAACNNNNNNTCC	1 cut(s)	1726
AluBI	AGCT	3 cut(s)	765, 1533, 1621
AluI	AGCT	3 cut(s)	765, 1533, 1621
Alw21I	GWGCWC	2 cut(s)	114, 767
Alw26I	GTCTC	5 cut(s)	297, 501, 634, 823, 1393
AlwI	GGATC	3 cut(s)	12, 1152, 1227
AlwNI	CAGNNNCTG	1 cut(s)	980
AoxI	GGCC	1 cut(s)	275
ApeKI	GCWGC	2 cut(s)	899, 1648
ApoI	RAATTY	4 cut(s)	449, 566, 1019, 1067
AspLEI	GCGC	1 cut(s)	24
AspS9I	GGNCC	2 cut(s)	275, 455
AsuHPI	GGTGA	5 cut(s)	67, 257, 594, 632, 1408
AvaII	GGWCC	1 cut(s)	455
AxyI	CCTNAGG	1 cut(s)	981
BanI	GGYRCC	1 cut(s)	649
BanII	GRGCYC	1 cut(s)	767
BauI	CACGAG	1 cut(s)	270
Bbv12I	GWGCWC	2 cut(s)	114, 767
BbvI	GCAGC	2 cut(s)	886, 1660
BccI	CCATC	4 cut(s)	146, 326, 1393, 1406
BceAI	ACGGC	1 cut(s)	1194
BcgI	CGANNNNNNTGC	2 cut(s)	1040, 1074
BciT130I	CCWGG	2 cut(s)	501, 618
BclI	TGATCA	1 cut(s)	910
BcoDI	GTCTC	5 cut(s)	297, 501, 634, 823, 1393
BfaI	CTAG	3 cut(s)	413, 675, 927
BfmI	CTRYAG	1 cut(s)	903
BfuAI	ACCTGC	1 cut(s)	677
BglII	AGATCT	4 cut(s)	929, 1268, 1343, 1495
BisI	GCNGC	4 cut(s)	254, 278, 900, 1649
BlsI	GCNGC	4 cut(s)	255, 279, 901, 1650
Bme1390I	CCNGG	2 cut(s)	501, 618
Bme18I	GGWCC	1 cut(s)	455
BmgBI	CACGTC	1 cut(s)	1040
BmgT120I	GGNCC	2 cut(s)	275, 455
BmiI	GGNNCC	1 cut(s)	651
BmrFI	CCNGG	2 cut(s)	501, 618
BmsI	GCATC	2 cut(s)	1303, 1378
BplI	GAGNNNNNCTC	2 cut(s)	749, 781
BpmI	CTGGAG	1 cut(s)	483
BsaBI	GATNNNNATC	1 cut(s)	714
BsaHI	GRCGYC	1 cut(s)	643
BsaI	GGTCTC	1 cut(s)	501
BsaJI	CCNNGG	4 cut(s)	298, 500, 594, 1643
Bsc4I	CCNNNNNNNGG	3 cut(s)	299, 659, 1621
Bse1I	ACTGG	5 cut(s)	90, 250, 450, 653, 747
Bse21I	CCTNAGG	1 cut(s)	981
Bse8I	GATNNNNATC	1 cut(s)	714
BseBI	CCWGG	2 cut(s)	501, 618
BseDI	CCNNGG	4 cut(s)	298, 500, 594, 1643
BseGI	GGATG	7 cut(s)	94, 289, 349, 1383, 1390, 1564, 1633
BseJI	GATNNNNATC	1 cut(s)	714
BseLI	CCNNNNNNNGG	3 cut(s)	299, 659, 1621
BseMII	CTCAG	6 cut(s)	947, 972, 1227, 1383, 1513, 1514
BseNI	ACTGG	5 cut(s)	90, 250, 450, 653, 747
BseRI	GAGGAG	2 cut(s)	998, 1586
BseXI	GCAGC	2 cut(s)	886, 1660
BsgI	GTGCAG	2 cut(s)	66, 546
Bsh1236I	CGCG	1 cut(s)	280
BshFI	GGCC	1 cut(s)	277
BshNI	GGYRCC	1 cut(s)	649
BsiHKAI	GWGCWC	2 cut(s)	114, 767
BslFI	GGGAC	2 cut(s)	576, 1517
BslI	CCNNNNNNNGG	3 cut(s)	299, 659, 1621
BsmAI	GTCTC	5 cut(s)	297, 501, 634, 823, 1393
BsmBI	CGTCTC	1 cut(s)	634
BsmFI	GGGAC	2 cut(s)	576, 1517
BsmI	GAATGC	2 cut(s)	184, 256
BsnI	GGCC	1 cut(s)	277
Bso31I	GGTCTC	1 cut(s)	501
Bsp1286I	GDGCHC	2 cut(s)	114, 767
BspACI	CCGC	3 cut(s)	253, 278, 631
BspANI	GGCC	1 cut(s)	277
BspCNI	CTCAG	6 cut(s)	946, 973, 1228, 1384, 1512, 1515
BspFNI	CGCG	1 cut(s)	280
BspHI	TCATGA	1 cut(s)	7
BspLI	GGNNCC	1 cut(s)	651
BspMI	ACCTGC	1 cut(s)	677
BspPI	GGATC	3 cut(s)	12, 1152, 1227
BspQI	GCTCTTC	1 cut(s)	755
BspT107I	GGYRCC	1 cut(s)	649
BspTNI	GGTCTC	1 cut(s)	501
BsrI	ACTGG	5 cut(s)	90, 250, 450, 653, 747
BssECI	CCNNGG	4 cut(s)	298, 500, 594, 1643
BssNI	GRCGYC	1 cut(s)	643
BssSI	CACGAG	1 cut(s)	270
BssT1I	CCWWGG	3 cut(s)	298, 594, 1643
Bst2BI	CACGAG	1 cut(s)	270
Bst2UI	CCWGG	2 cut(s)	501, 618
Bst4CI	ACNGT	5 cut(s)	148, 553, 1255, 1610, 1742
Bst6I	CTCTTC	2 cut(s)	696, 755
BstACI	GRCGYC	1 cut(s)	643
BstC8I	GCNNGC	3 cut(s)	120, 1053, 1623
BstDEI	CTNAG	7 cut(s)	816, 933, 981, 1236, 1392, 1499, 1523
BstENI	CCTNNNNNAGG	1 cut(s)	297
BstF5I	GGATG	7 cut(s)	94, 289, 349, 1383, 1390, 1564, 1633
BstFNI	CGCG	1 cut(s)	280
BstHHI	GCGC	1 cut(s)	24
BstMAI	GTCTC	5 cut(s)	297, 501, 634, 823, 1393
BstNI	CCWGG	2 cut(s)	501, 618
BstNSI	RCATGY	1 cut(s)	1585
BstSCI	CCNGG	2 cut(s)	499, 616
BstSFI	CTRYAG	1 cut(s)	903
BstUI	CGCG	1 cut(s)	280
BstV1I	GCAGC	2 cut(s)	886, 1660
BstX2I	RGATCY	4 cut(s)	929, 1268, 1343, 1495
BstYI	RGATCY	4 cut(s)	929, 1268, 1343, 1495
Bsu36I	CCTNAGG	1 cut(s)	981
BsuRI	GGCC	1 cut(s)	277
BtrI	CACGTC	1 cut(s)	1040
BtsCI	GGATG	7 cut(s)	94, 289, 349, 1383, 1390, 1564, 1633
BtsIMutI	CAGTG	5 cut(s)	83, 558, 754, 920, 1598
BveI	ACCTGC	1 cut(s)	677
Cac8I	GCNNGC	3 cut(s)	120, 1053, 1623
CaiI	CAGNNNCTG	1 cut(s)	980
CciI	TCATGA	1 cut(s)	7
CfoI	GCGC	1 cut(s)	24
Cfr13I	GGNCC	2 cut(s)	275, 455
CseI	GACGC	1 cut(s)	1018
Csp6I	GTAC	1 cut(s)	666
CspCI	CAANNNNNGTGG	2 cut(s)	1361, 1396
CviAII	CATG	8 cut(s)	8, 40, 371, 396, 1130, 1205, 1355, 1582
CviJI	RGCY	7 cut(s)	277, 765, 926, 1300, 1459, 1533, 1621
CviKI_1	RGCY	7 cut(s)	277, 765, 926, 1300, 1459, 1533, 1621
CviQI	GTAC	1 cut(s)	666
DdeI	CTNAG	7 cut(s)	816, 933, 981, 1236, 1392, 1499, 1523
DrdI	GACNNNNNNGTC	1 cut(s)	970
DseDI	GACNNNNNNGTC	1 cut(s)	970
Eam1104I	CTCTTC	2 cut(s)	696, 755
EarI	CTCTTC	2 cut(s)	696, 755
EciI	GGCGGA	1 cut(s)	646
Ecl136II	GAGCTC	1 cut(s)	765
Eco130I	CCWWGG	3 cut(s)	298, 594, 1643
Eco24I	GRGCYC	1 cut(s)	767
Eco31I	GGTCTC	1 cut(s)	501
Eco32I	GATATC	2 cut(s)	1119, 1194
Eco47I	GGWCC	1 cut(s)	455
Eco53kI	GAGCTC	1 cut(s)	765
Eco57I	CTGAAG	4 cut(s)	610, 1113, 1263, 1568
Eco81I	CCTNAGG	1 cut(s)	981
EcoICRI	GAGCTC	1 cut(s)	765
EcoNI	CCTNNNNNAGG	1 cut(s)	297
EcoRI	GAATTC	1 cut(s)	1019
EcoRII	CCWGG	2 cut(s)	499, 616
EcoRV	GATATC	2 cut(s)	1119, 1194
EcoT14I	CCWWGG	3 cut(s)	298, 594, 1643
EcoT22I	ATGCAT	1 cut(s)	1587
EcoT38I	GRGCYC	1 cut(s)	767
ErhI	CCWWGG	3 cut(s)	298, 594, 1643
Esp3I	CGTCTC	1 cut(s)	634
FaeI	CATG	8 cut(s)	11, 43, 374, 399, 1133, 1208, 1358, 1585
FaqI	GGGAC	2 cut(s)	576, 1517
FatI	CATG	8 cut(s)	7, 39, 370, 395, 1129, 1204, 1354, 1581
FbaI	TGATCA	1 cut(s)	910
FblI	GTMKAC	1 cut(s)	36
Fnu4HI	GCNGC	4 cut(s)	254, 278, 900, 1649
FokI	GGATG	7 cut(s)	101, 276, 356, 1390, 1397, 1571, 1620
FriOI	GRGCYC	1 cut(s)	767
Fsp4HI	GCNGC	4 cut(s)	254, 278, 900, 1649
FspBI	CTAG	3 cut(s)	413, 675, 927
FspI	TGCGCA	1 cut(s)	23
GlaI	GCGC	1 cut(s)	23
GluI	GCNGC	4 cut(s)	254, 278, 900, 1649
GsuI	CTGGAG	1 cut(s)	483
HaeIII	GGCC	1 cut(s)	277
HgaI	GACGC	1 cut(s)	1018
HhaI	GCGC	1 cut(s)	24
Hin1I	GRCGYC	1 cut(s)	643
Hin1II	CATG	8 cut(s)	11, 43, 374, 399, 1133, 1208, 1358, 1585
Hin6I	GCGC	1 cut(s)	22
HinP1I	GCGC	1 cut(s)	22
HincII	GTYRAC	2 cut(s)	37, 549
HindII	GTYRAC	2 cut(s)	37, 549
HphI	GGTGA	5 cut(s)	67, 257, 594, 632, 1408
Hpy166II	GTNNAC	3 cut(s)	37, 549, 689
Hpy8I	GTNNAC	3 cut(s)	37, 549, 689
HpyCH4III	ACNGT	5 cut(s)	148, 553, 1255, 1610, 1742
HpyCH4IV	ACGT	2 cut(s)	643, 1039
HpyCH4V	TGCA	8 cut(s)	83, 122, 182, 374, 389, 527, 576, 1585
HpyF3I	CTNAG	7 cut(s)	816, 933, 981, 1236, 1392, 1499, 1523
HpySE526I	ACGT	2 cut(s)	643, 1039
Hsp92I	GRCGYC	1 cut(s)	643
Hsp92II	CATG	8 cut(s)	11, 43, 374, 399, 1133, 1208, 1358, 1585
HspAI	GCGC	1 cut(s)	22
Ksp22I	TGATCA	1 cut(s)	910
LguI	GCTCTTC	1 cut(s)	755
LmnI	GCTCC	2 cut(s)	82, 770
Lsp1109I	GCAGC	2 cut(s)	886, 1660
LweI	GCATC	2 cut(s)	1303, 1378
MaeI	CTAG	3 cut(s)	413, 675, 927
MaeII	ACGT	2 cut(s)	643, 1039
MaeIII	GTNAC	6 cut(s)	142, 553, 620, 1111, 1255, 1596
MfeI	CAATTG	1 cut(s)	105
MflI	RGATCY	4 cut(s)	929, 1268, 1343, 1495
MhlI	GDGCHC	2 cut(s)	114, 767
MlyI	GAGTC	3 cut(s)	825, 1247, 1322
MmeI	TCCRAC	1 cut(s)	1414
Mph1103I	ATGCAT	1 cut(s)	1587
MseI	TTAA	8 cut(s)	194, 506, 798, 869, 1155, 1230, 1305, 1719
MslI	CAYNNNNRTG	1 cut(s)	270
MspR9I	CCNGG	2 cut(s)	501, 618
MunI	CAATTG	1 cut(s)	105
Mva1269I	GAATGC	2 cut(s)	184, 256
MvaI	CCWGG	2 cut(s)	501, 618
MvnI	CGCG	1 cut(s)	280
NlaIII	CATG	8 cut(s)	11, 43, 374, 399, 1133, 1208, 1358, 1585
NlaIV	GGNNCC	1 cut(s)	651
NmuCI	GTSAC	5 cut(s)	553, 620, 1111, 1255, 1596
NsbI	TGCGCA	1 cut(s)	23
NsiI	ATGCAT	1 cut(s)	1587
NspI	RCATGY	1 cut(s)	1585
OliI	CACNNNNGTG	1 cut(s)	270
PagI	TCATGA	1 cut(s)	7
PciSI	GCTCTTC	1 cut(s)	755
PcsI	WCGNNNNNNNCGW	3 cut(s)	277, 1036, 1184
PctI	GAATGC	2 cut(s)	184, 256
PfeI	GAWTC	7 cut(s)	68, 542, 599, 842, 989, 1027, 1088
PflFI	GACNNNGTC	2 cut(s)	967, 1012
PkrI	GCNGC	4 cut(s)	255, 279, 901, 1650
PleI	GAGTC	3 cut(s)	825, 1246, 1321
PpsI	GAGTC	3 cut(s)	825, 1246, 1321
Psp124BI	GAGCTC	1 cut(s)	767
Psp6I	CCWGG	2 cut(s)	499, 616
PspGI	CCWGG	2 cut(s)	499, 616
PspN4I	GGNNCC	1 cut(s)	651
PspPI	GGNCC	2 cut(s)	275, 455
PsrI	GAACNNNNNNTAC	2 cut(s)	1648, 1680
PstNI	CAGNNNCTG	1 cut(s)	980
PsuI	RGATCY	4 cut(s)	929, 1268, 1343, 1495
PsyI	GACNNNGTC	2 cut(s)	967, 1012
RsaI	GTAC	1 cut(s)	667
RsaNI	GTAC	1 cut(s)	666
RseI	CAYNNNNRTG	1 cut(s)	270
SacI	GAGCTC	1 cut(s)	767
SalI	GTCGAC	1 cut(s)	35
SapI	GCTCTTC	1 cut(s)	755
SaqAI	TTAA	8 cut(s)	194, 506, 798, 869, 1155, 1230, 1305, 1719
SatI	GCNGC	4 cut(s)	254, 278, 900, 1649
Sau96I	GGNCC	2 cut(s)	275, 455
SchI	GAGTC	3 cut(s)	825, 1247, 1322
ScrFI	CCNGG	2 cut(s)	501, 618
SduI	GDGCHC	2 cut(s)	114, 767
SfaNI	GCATC	2 cut(s)	1303, 1378
SfcI	CTRYAG	1 cut(s)	903
SinI	GGWCC	1 cut(s)	455
SmiMI	CAYNNNNRTG	1 cut(s)	270
SsiI	CCGC	3 cut(s)	253, 278, 631
SspI	AATATT	1 cut(s)	886
SspMI	CTAG	3 cut(s)	413, 675, 927
SstI	GAGCTC	1 cut(s)	767
StyD4I	CCNGG	2 cut(s)	499, 616
StyI	CCWWGG	3 cut(s)	298, 594, 1643
TaaI	ACNGT	5 cut(s)	148, 553, 1255, 1610, 1742
TaiI	ACGT	2 cut(s)	646, 1042
TaqI	TCGA	6 cut(s)	36, 1135, 1210, 1285, 1360, 1537
TaqII	GACCGA	1 cut(s)	483
TauI	GCSGC	2 cut(s)	256, 280
TfiI	GAWTC	7 cut(s)	68, 542, 599, 842, 989, 1027, 1088
Tru1I	TTAA	8 cut(s)	194, 506, 798, 869, 1155, 1230, 1305, 1719
Tru9I	TTAA	8 cut(s)	194, 506, 798, 869, 1155, 1230, 1305, 1719
TscAI	CASTG	5 cut(s)	90, 558, 754, 920, 1605
TseFI	GTSAC	5 cut(s)	553, 620, 1111, 1255, 1596
TseI	GCWGC	2 cut(s)	899, 1648
Tsp45I	GTSAC	5 cut(s)	553, 620, 1111, 1255, 1596
TspGWI	ACGGA	2 cut(s)	757, 1604
TspRI	CASTG	5 cut(s)	90, 558, 754, 920, 1605
Tth111I	GACNNNGTC	2 cut(s)	967, 1012
VpaK11BI	GGWCC	1 cut(s)	455
XagI	CCTNNNNNAGG	1 cut(s)	297
XapI	RAATTY	4 cut(s)	449, 566, 1019, 1067
XbaI	TCTAGA	1 cut(s)	412
XceI	RCATGY	1 cut(s)	1585
XmiI	GTMKAC	1 cut(s)	36
XspI	CTAG	3 cut(s)	413, 675, 927
ZraI	GACGTC	1 cut(s)	644
Zsp2I	ATGCAT	1 cut(s)	1587

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.