ubiquitin-NEDD8-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G31340 AT2G35635 |
| fragaria_vesca | FvH4_3g15350 FvH4_6g21361 |
| malus_domestica | MD10G1205300.v1.1 MD12G1050500.v1.1 MD14G1049000.v1.1 |
| prunus_persica | Prupe.4G136400_v2.0.a1 Prupe.7G086300_v2.0.a1 |
| pyrus_communis | pycom10g17580 pycom12g04500 pycom14g04010 |
| rosa_chinensis | RchiOBHm_Chr0c32g0501481 RchiOBHm_Chr3g0477981 RchiOBHm_Chr3g0478131 RchiOBHm_Chr3g0478171 RchiOBHm_Chr3g0478321 RchiOBHm_Chr3g0478371 RchiOBHm_Chr3g0483791 RchiOBHm_Chr4g0426431 |
| rosa_laevigata | RLG00000032875 |
| rosa_multiflora | Rmu_sc0001218.1_g000001 Rmu_sc0001333.1_g000004 Rmu_sc0005657.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00403390 |
| rosa_rugosa | Rorug03G0165100 Rorug05G0088500 |
| rosa_samantha | Rh3AG215400 Rh3AG215900 |
| rosa_wichuraiana | Rw0G010130 Rw3G019400 Rw3G019430 Rw3G019480 Rw4G023230 Rw5G016380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 141 |
| AciI | CCGC | 1 cut(s) | 178 |
| AcsI | RAATTY | 2 cut(s) | 14, 297 |
| AdeI | CACNNNGTG | 1 cut(s) | 410 |
| AfaI | GTAC | 1 cut(s) | 368 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 271 |
| AgsI | TTSAA | 1 cut(s) | 245 |
| AjnI | CCWGG | 1 cut(s) | 168 |
| AluBI | AGCT | 1 cut(s) | 340 |
| AluI | AGCT | 1 cut(s) | 340 |
| ApeKI | GCWGC | 1 cut(s) | 337 |
| ApoI | RAATTY | 2 cut(s) | 14, 297 |
| AsuC2I | CCSGG | 1 cut(s) | 220 |
| AsuHPI | GGTGA | 2 cut(s) | 158, 217 |
| BbvCI | CCTCAGC | 1 cut(s) | 182 |
| BbvI | GCAGC | 1 cut(s) | 349 |
| BciT130I | CCWGG | 1 cut(s) | 170 |
| BclI | TGATCA | 2 cut(s) | 22, 79 |
| BcnI | CCSGG | 1 cut(s) | 220 |
| BfaI | CTAG | 1 cut(s) | 395 |
| BisI | GCNGC | 2 cut(s) | 179, 338 |
| BlsI | GCNGC | 2 cut(s) | 180, 339 |
| Bme1390I | CCNGG | 2 cut(s) | 170, 220 |
| BmrFI | CCNGG | 2 cut(s) | 170, 220 |
| BmsI | GCATC | 1 cut(s) | 78 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 365, 397 |
| Bpu10I | CCTNAGC | 1 cut(s) | 182 |
| BpuMI | CCSGG | 1 cut(s) | 220 |
| BsaAI | YACGTR | 1 cut(s) | 410 |
| BsaWI | WCCGGW | 1 cut(s) | 304 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 271 |
| Bse118I | RCCGGY | 1 cut(s) | 101 |
| BseBI | CCWGG | 1 cut(s) | 170 |
| BseGI | GGATG | 2 cut(s) | 69, 144 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 271 |
| BseMII | CTCAG | 1 cut(s) | 173 |
| BseRI | GAGGAG | 1 cut(s) | 299 |
| BseXI | GCAGC | 1 cut(s) | 349 |
| BsiSI | CCGG | 3 cut(s) | 102, 219, 305 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 271 |
| BsmI | GAATGC | 1 cut(s) | 214 |
| Bsp143I | GATC | 2 cut(s) | 22, 79 |
| BspACI | CCGC | 1 cut(s) | 178 |
| BspCNI | CTCAG | 1 cut(s) | 174 |
| BsrFI | RCCGGY | 1 cut(s) | 101 |
| BssAI | RCCGGY | 1 cut(s) | 101 |
| BssMI | GATC | 2 cut(s) | 22, 79 |
| Bst2UI | CCWGG | 1 cut(s) | 170 |
| Bst6I | CTCTTC | 1 cut(s) | 168 |
| BstBAI | YACGTR | 1 cut(s) | 410 |
| BstC8I | GCNNGC | 3 cut(s) | 331, 335, 402 |
| BstDEI | CTNAG | 1 cut(s) | 182 |
| BstF5I | GGATG | 2 cut(s) | 69, 144 |
| BstKTI | GATC | 2 cut(s) | 25, 82 |
| BstMBI | GATC | 2 cut(s) | 22, 79 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 316 |
| BstNI | CCWGG | 1 cut(s) | 170 |
| BstNSI | RCATGY | 1 cut(s) | 33 |
| BstSCI | CCNGG | 2 cut(s) | 168, 218 |
| BstV1I | GCAGC | 1 cut(s) | 349 |
| BtsCI | GGATG | 2 cut(s) | 69, 144 |
| Cac8I | GCNNGC | 3 cut(s) | 331, 335, 402 |
| Cfr10I | RCCGGY | 1 cut(s) | 101 |
| CsiI | ACCWGGT | 1 cut(s) | 168 |
| Csp6I | GTAC | 1 cut(s) | 367 |
| CviAII | CATG | 2 cut(s) | 30, 35 |
| CviJI | RGCY | 4 cut(s) | 181, 319, 340, 381 |
| CviKI_1 | RGCY | 4 cut(s) | 181, 319, 340, 381 |
| CviQI | GTAC | 1 cut(s) | 367 |
| DdeI | CTNAG | 1 cut(s) | 182 |
| DpnI | GATC | 2 cut(s) | 24, 81 |
| DpnII | GATC | 2 cut(s) | 22, 79 |
| DraIII | CACNNNGTG | 1 cut(s) | 410 |
| Eam1104I | CTCTTC | 1 cut(s) | 168 |
| EarI | CTCTTC | 1 cut(s) | 168 |
| EcoRI | GAATTC | 1 cut(s) | 297 |
| EcoRII | CCWGG | 1 cut(s) | 168 |
| FaeI | CATG | 2 cut(s) | 33, 38 |
| FaiI | YATR | 9 cut(s) | 6, 21, 31, 36, 43, 141, 197, 327, 424 |
| FatI | CATG | 2 cut(s) | 29, 34 |
| FbaI | TGATCA | 2 cut(s) | 22, 79 |
| Fnu4HI | GCNGC | 2 cut(s) | 179, 338 |
| FokI | GGATG | 2 cut(s) | 56, 131 |
| Fsp4HI | GCNGC | 2 cut(s) | 179, 338 |
| FspBI | CTAG | 1 cut(s) | 395 |
| GluI | GCNGC | 2 cut(s) | 179, 338 |
| HapII | CCGG | 3 cut(s) | 102, 219, 305 |
| Hin1II | CATG | 2 cut(s) | 33, 38 |
| HincII | GTYRAC | 1 cut(s) | 159 |
| HindII | GTYRAC | 1 cut(s) | 159 |
| HinfI | GANTC | 1 cut(s) | 155 |
| HpaII | CCGG | 3 cut(s) | 102, 219, 305 |
| HphI | GGTGA | 2 cut(s) | 158, 217 |
| Hpy166II | GTNNAC | 1 cut(s) | 159 |
| Hpy188III | TCNNGA | 2 cut(s) | 56, 77 |
| Hpy8I | GTNNAC | 1 cut(s) | 159 |
| HpyAV | CCTTC | 3 cut(s) | 59, 113, 265 |
| HpyCH4IV | ACGT | 1 cut(s) | 409 |
| HpyCH4V | TGCA | 3 cut(s) | 134, 310, 404 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 316 |
| HpyF3I | CTNAG | 1 cut(s) | 182 |
| HpySE526I | ACGT | 1 cut(s) | 409 |
| Hsp92II | CATG | 2 cut(s) | 33, 38 |
| Ksp22I | TGATCA | 2 cut(s) | 22, 79 |
| Kzo9I | GATC | 2 cut(s) | 22, 79 |
| LpnPI | CCDG | 8 cut(s) | 41, 90, 115, 155, 182, 232, 315, 318 |
| Lsp1109I | GCAGC | 1 cut(s) | 349 |
| LweI | GCATC | 1 cut(s) | 78 |
| MabI | ACCWGGT | 1 cut(s) | 168 |
| MaeI | CTAG | 1 cut(s) | 395 |
| MaeII | ACGT | 1 cut(s) | 409 |
| MalI | GATC | 2 cut(s) | 24, 81 |
| MboI | GATC | 2 cut(s) | 22, 79 |
| MboII | GAAGA | 2 cut(s) | 128, 155 |
| MfeI | CAATTG | 1 cut(s) | 110 |
| MluCI | AATT | 4 cut(s) | 14, 110, 228, 297 |
| MlyI | GAGTC | 1 cut(s) | 164 |
| MnlI | CCTC | 7 cut(s) | 84, 177, 182, 277, 286, 312, 367 |
| MseI | TTAA | 1 cut(s) | 201 |
| MspI | CCGG | 3 cut(s) | 102, 219, 305 |
| MspR9I | CCNGG | 2 cut(s) | 170, 220 |
| MunI | CAATTG | 1 cut(s) | 110 |
| Mva1269I | GAATGC | 1 cut(s) | 214 |
| MvaI | CCWGG | 1 cut(s) | 170 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 316 |
| NciI | CCSGG | 1 cut(s) | 220 |
| NdeII | GATC | 2 cut(s) | 22, 79 |
| NlaIII | CATG | 2 cut(s) | 33, 38 |
| NspI | RCATGY | 1 cut(s) | 33 |
| PctI | GAATGC | 1 cut(s) | 214 |
| PkrI | GCNGC | 2 cut(s) | 180, 339 |
| PleI | GAGTC | 1 cut(s) | 163 |
| PpsI | GAGTC | 1 cut(s) | 163 |
| Ppu21I | YACGTR | 1 cut(s) | 410 |
| PsiI | TTATAA | 1 cut(s) | 141 |
| Psp6I | CCWGG | 1 cut(s) | 168 |
| PspGI | CCWGG | 1 cut(s) | 168 |
| RsaI | GTAC | 1 cut(s) | 368 |
| RsaNI | GTAC | 1 cut(s) | 367 |
| SaqAI | TTAA | 1 cut(s) | 201 |
| SatI | GCNGC | 2 cut(s) | 179, 338 |
| Sau3AI | GATC | 2 cut(s) | 22, 79 |
| SchI | GAGTC | 1 cut(s) | 164 |
| ScrFI | CCNGG | 2 cut(s) | 170, 220 |
| SetI | ASST | 5 cut(s) | 171, 207, 282, 342, 412 |
| SexAI | ACCWGGT | 1 cut(s) | 168 |
| SfaNI | GCATC | 1 cut(s) | 78 |
| Sse9I | AATT | 4 cut(s) | 14, 110, 228, 297 |
| SsiI | CCGC | 1 cut(s) | 178 |
| SspMI | CTAG | 1 cut(s) | 395 |
| StyD4I | CCNGG | 2 cut(s) | 168, 218 |
| TaiI | ACGT | 1 cut(s) | 412 |
| TaqII | GACCGA | 1 cut(s) | 279 |
| TasI | AATT | 4 cut(s) | 14, 110, 228, 297 |
| TatI | WGTACW | 1 cut(s) | 366 |
| TauI | GCSGC | 1 cut(s) | 181 |
| Tru1I | TTAA | 1 cut(s) | 201 |
| Tru9I | TTAA | 1 cut(s) | 201 |
| TseI | GCWGC | 1 cut(s) | 337 |
| TspDTI | ATGAA | 2 cut(s) | 284, 380 |
| XapI | RAATTY | 2 cut(s) | 14, 297 |
| XceI | RCATGY | 1 cut(s) | 33 |
| XspI | CTAG | 1 cut(s) | 395 |