ubiquitin-NEDD8-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G31340 AT2G35635 |
| fragaria_vesca | FvH4_3g15350 FvH4_6g21361 |
| malus_domestica | MD10G1205300.v1.1 MD12G1050500.v1.1 MD14G1049000.v1.1 |
| prunus_persica | Prupe.4G136400_v2.0.a1 Prupe.7G086300_v2.0.a1 |
| pyrus_communis | pycom10g17580 pycom12g04500 pycom14g04010 |
| rosa_chinensis | RchiOBHm_Chr0c32g0501481 RchiOBHm_Chr3g0477981 RchiOBHm_Chr3g0478131 RchiOBHm_Chr3g0478171 RchiOBHm_Chr3g0478321 RchiOBHm_Chr3g0478371 RchiOBHm_Chr3g0483791 RchiOBHm_Chr4g0426431 |
| rosa_laevigata | RLG00000032875 |
| rosa_multiflora | Rmu_sc0001218.1_g000001 Rmu_sc0001333.1_g000004 Rmu_sc0005657.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00403390 |
| rosa_rugosa | Rorug03G0165100 Rorug05G0088500 |
| rosa_samantha | Rh3AG215400 Rh3AG215900 |
| rosa_wichuraiana | Rw0G010130 Rw3G019400 Rw3G019430 Rw3G019480 Rw4G023230 Rw5G016380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 201 |
| AciI | CCGC | 3 cut(s) | 91, 183, 249 |
| AclWI | GGATC | 2 cut(s) | 82, 199 |
| AcsI | RAATTY | 1 cut(s) | 357 |
| AdeI | CACNNNGTG | 1 cut(s) | 470 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 331 |
| AgsI | TTSAA | 2 cut(s) | 305, 434 |
| AluBI | AGCT | 1 cut(s) | 397 |
| AluI | AGCT | 1 cut(s) | 397 |
| AlwI | GGATC | 2 cut(s) | 82, 199 |
| ApeKI | GCWGC | 1 cut(s) | 57 |
| ApoI | RAATTY | 1 cut(s) | 357 |
| AspS9I | GGNCC | 1 cut(s) | 251 |
| AsuC2I | CCSGG | 1 cut(s) | 280 |
| AsuHPI | GGTGA | 1 cut(s) | 277 |
| AvaII | GGWCC | 1 cut(s) | 251 |
| BbvCI | CCTCAGC | 1 cut(s) | 242 |
| BbvI | GCAGC | 1 cut(s) | 69 |
| BccI | CCATC | 1 cut(s) | 173 |
| BclI | TGATCA | 1 cut(s) | 139 |
| BcnI | CCSGG | 1 cut(s) | 280 |
| BisI | GCNGC | 1 cut(s) | 58 |
| BlsI | GCNGC | 1 cut(s) | 59 |
| Bme1390I | CCNGG | 1 cut(s) | 280 |
| Bme18I | GGWCC | 1 cut(s) | 251 |
| BmgT120I | GGNCC | 1 cut(s) | 251 |
| BmrFI | CCNGG | 1 cut(s) | 280 |
| BmrI | ACTGGG | 1 cut(s) | 36 |
| BmsI | GCATC | 1 cut(s) | 138 |
| BmuI | ACTGGG | 1 cut(s) | 36 |
| Bpu10I | CCTNAGC | 1 cut(s) | 242 |
| BpuEI | CTTGAG | 1 cut(s) | 65 |
| BpuMI | CCSGG | 1 cut(s) | 280 |
| BsaAI | YACGTR | 1 cut(s) | 470 |
| BsaWI | WCCGGW | 1 cut(s) | 364 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 331 |
| Bse1I | ACTGG | 2 cut(s) | 31, 394 |
| BseGI | GGATG | 1 cut(s) | 129 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 331 |
| BseMII | CTCAG | 1 cut(s) | 233 |
| BseNI | ACTGG | 2 cut(s) | 31, 394 |
| BseRI | GAGGAG | 1 cut(s) | 359 |
| BseXI | GCAGC | 1 cut(s) | 69 |
| BsgI | GTGCAG | 1 cut(s) | 447 |
| BsiSI | CCGG | 2 cut(s) | 279, 365 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 331 |
| Bsp143I | GATC | 3 cut(s) | 87, 139, 204 |
| BspACI | CCGC | 3 cut(s) | 91, 183, 249 |
| BspCNI | CTCAG | 1 cut(s) | 234 |
| BspPI | GGATC | 2 cut(s) | 82, 199 |
| BsrI | ACTGG | 2 cut(s) | 31, 394 |
| BssMI | GATC | 3 cut(s) | 87, 139, 204 |
| BstBAI | YACGTR | 1 cut(s) | 470 |
| BstC8I | GCNNGC | 2 cut(s) | 395, 462 |
| BstDEI | CTNAG | 1 cut(s) | 242 |
| BstF5I | GGATG | 1 cut(s) | 129 |
| BstKTI | GATC | 3 cut(s) | 90, 142, 207 |
| BstMBI | GATC | 3 cut(s) | 87, 139, 204 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 376 |
| BstSCI | CCNGG | 1 cut(s) | 278 |
| BstV1I | GCAGC | 1 cut(s) | 69 |
| BstX2I | RGATCY | 2 cut(s) | 87, 204 |
| BstYI | RGATCY | 2 cut(s) | 87, 204 |
| BtsCI | GGATG | 1 cut(s) | 129 |
| Cac8I | GCNNGC | 2 cut(s) | 395, 462 |
| Cfr13I | GGNCC | 1 cut(s) | 251 |
| CviAII | CATG | 1 cut(s) | 95 |
| CviJI | RGCY | 6 cut(s) | 83, 241, 272, 379, 397, 441 |
| CviKI_1 | RGCY | 6 cut(s) | 83, 241, 272, 379, 397, 441 |
| DdeI | CTNAG | 1 cut(s) | 242 |
| DpnI | GATC | 3 cut(s) | 89, 141, 206 |
| DpnII | GATC | 3 cut(s) | 87, 139, 204 |
| DraIII | CACNNNGTG | 1 cut(s) | 470 |
| EciI | GGCGGA | 3 cut(s) | 80, 198, 264 |
| Eco47I | GGWCC | 1 cut(s) | 251 |
| EcoRI | GAATTC | 1 cut(s) | 357 |
| FaeI | CATG | 1 cut(s) | 98 |
| FaiI | YATR | 6 cut(s) | 96, 103, 201, 257, 387, 484 |
| FatI | CATG | 1 cut(s) | 94 |
| FbaI | TGATCA | 1 cut(s) | 139 |
| Fnu4HI | GCNGC | 1 cut(s) | 58 |
| FokI | GGATG | 1 cut(s) | 116 |
| Fsp4HI | GCNGC | 1 cut(s) | 58 |
| GluI | GCNGC | 1 cut(s) | 58 |
| HapII | CCGG | 2 cut(s) | 279, 365 |
| Hin1II | CATG | 1 cut(s) | 98 |
| HincII | GTYRAC | 1 cut(s) | 219 |
| HindII | GTYRAC | 1 cut(s) | 219 |
| HindIII | AAGCTT | 1 cut(s) | 395 |
| HinfI | GANTC | 3 cut(s) | 215, 305, 327 |
| HpaII | CCGG | 2 cut(s) | 279, 365 |
| HphI | GGTGA | 1 cut(s) | 277 |
| Hpy166II | GTNNAC | 1 cut(s) | 219 |
| Hpy188III | TCNNGA | 4 cut(s) | 13, 44, 116, 137 |
| Hpy8I | GTNNAC | 1 cut(s) | 219 |
| HpyAV | CCTTC | 4 cut(s) | 119, 262, 428, 458 |
| HpyCH4IV | ACGT | 1 cut(s) | 469 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 194, 370, 416, 464 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 376 |
| HpyF3I | CTNAG | 1 cut(s) | 242 |
| HpySE526I | ACGT | 1 cut(s) | 469 |
| Hsp92II | CATG | 1 cut(s) | 98 |
| Ksp22I | TGATCA | 1 cut(s) | 139 |
| Kzo9I | GATC | 3 cut(s) | 87, 139, 204 |
| LpnPI | CCDG | 9 cut(s) | 12, 101, 150, 175, 242, 292, 375, 378, 474 |
| Lsp1109I | GCAGC | 1 cut(s) | 69 |
| LweI | GCATC | 1 cut(s) | 138 |
| MaeII | ACGT | 1 cut(s) | 469 |
| MalI | GATC | 3 cut(s) | 89, 141, 206 |
| MboI | GATC | 3 cut(s) | 87, 139, 204 |
| MboII | GAAGA | 2 cut(s) | 43, 188 |
| MfeI | CAATTG | 1 cut(s) | 170 |
| MflI | RGATCY | 2 cut(s) | 87, 204 |
| MluCI | AATT | 3 cut(s) | 170, 288, 357 |
| MlyI | GAGTC | 1 cut(s) | 224 |
| MnlI | CCTC | 7 cut(s) | 40, 144, 231, 237, 337, 346, 372 |
| MseI | TTAA | 2 cut(s) | 225, 261 |
| MspI | CCGG | 2 cut(s) | 279, 365 |
| MspR9I | CCNGG | 1 cut(s) | 280 |
| MunI | CAATTG | 1 cut(s) | 170 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 376 |
| NciI | CCSGG | 1 cut(s) | 280 |
| NdeII | GATC | 3 cut(s) | 87, 139, 204 |
| NlaIII | CATG | 1 cut(s) | 98 |
| PfeI | GAWTC | 2 cut(s) | 305, 327 |
| PkrI | GCNGC | 1 cut(s) | 59 |
| PleI | GAGTC | 1 cut(s) | 223 |
| PpsI | GAGTC | 1 cut(s) | 223 |
| Ppu21I | YACGTR | 1 cut(s) | 470 |
| PsiI | TTATAA | 1 cut(s) | 201 |
| PspPI | GGNCC | 1 cut(s) | 251 |
| PsuI | RGATCY | 2 cut(s) | 87, 204 |
| SaqAI | TTAA | 2 cut(s) | 225, 261 |
| SatI | GCNGC | 1 cut(s) | 58 |
| Sau3AI | GATC | 3 cut(s) | 87, 139, 204 |
| Sau96I | GGNCC | 1 cut(s) | 251 |
| SchI | GAGTC | 1 cut(s) | 224 |
| ScrFI | CCNGG | 1 cut(s) | 280 |
| SetI | ASST | 7 cut(s) | 51, 231, 256, 267, 399, 439, 472 |
| SfaNI | GCATC | 1 cut(s) | 138 |
| SinI | GGWCC | 1 cut(s) | 251 |
| SmlI | CTYRAG | 1 cut(s) | 44 |
| SmoI | CTYRAG | 1 cut(s) | 44 |
| Sse9I | AATT | 3 cut(s) | 170, 288, 357 |
| SsiI | CCGC | 3 cut(s) | 91, 183, 249 |
| StyD4I | CCNGG | 1 cut(s) | 278 |
| TaiI | ACGT | 1 cut(s) | 472 |
| TaqI | TCGA | 1 cut(s) | 308 |
| TaqII | GACCGA | 1 cut(s) | 339 |
| TasI | AATT | 3 cut(s) | 170, 288, 357 |
| TfiI | GAWTC | 2 cut(s) | 305, 327 |
| Tru1I | TTAA | 2 cut(s) | 225, 261 |
| Tru9I | TTAA | 2 cut(s) | 225, 261 |
| TseI | GCWGC | 1 cut(s) | 57 |
| TspDTI | ATGAA | 2 cut(s) | 300, 440 |
| VpaK11BI | GGWCC | 1 cut(s) | 251 |
| XapI | RAATTY | 1 cut(s) | 357 |