RchiOBHm_Chr4g0393291

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0003777
Physical Location & Seq
Forward (+)
8801086 .. 8805485
4400 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36590

Sequence Viewer

Length: 1131 bp
ATGGCTTCGTGCGCCACCGCCTTCCTCTGCAACCACGCCGCCGCATTAACCTCACCTTACTCGCCTCGAAAGACCAGAACCACCGCAAGAAGCCTCCGGAGCTCTCTCAGACCAACCACCATCACTGCCAAGCAGGACCAGAAGACGGCGTTGCAGTACCGGAAGCTCGGCGACTCGGACCTCGAAATTAGCGAAATCACTCTTGGCACAATGACGTTTGGTGAGCAAAGCTCGGAGAAAGAAGCGCACGAAATTCTCAGCTACGCTTTCGACAATGGGATCAACATTTTGGACACTGCTGAAGCTTACCCGATTCCAATGAAGAAGGAGACGCGGGGATTGACTGACCTCTACATTGCCAGCTGGCTAAAGTCTCAGCCCCGCGAGAAGATTGTTTTGGCAACAAAAGTATGTGGGTATTCAGAGACGTCTAGTTATCTGCGTGACAATGCAAAGGTCTTGAGGGTGGATGCTGCAAATATTAGAGAGAGTGTAGAGAAAAGCCTTAAGAGACTCGGCACAGATTACATTGATCTATTGCAAATTCATTGGCCAGATCGCTATGTTACACTATTTGGTACGTTATATTGGTGTTCCAATGAGACTTCATACGGAGTGATGGAGTTCGTAAATACTGCTAAAGTTGAAGGACTACCAAAGATCGTCAGTATACAAAACAATTACAGTCTGCTTGTTAGAACTCATTTTGAAATTGATCTTGTTGAAGTTTGCCTCCCACAACATCACAACATTGGCTTCCTAGCTTATTCTCCACTTGCTGGTGGAGCTCTGACCGGAAAGTACATTGATAGCAATTCCGATGCTGCAAGAAAAGGGAGGTTGAATCTCTTCCCAGGCTACATGGAAAGATATAACAAATCCATTGCCAGGGAAGCAACAATAAAGTACATCGAACTTGCCAAAAAACACAGGCTGACTCCAGTTCAGCTTGCACTTGGATTTGCAAGGGATCGTCCATTCATCACCAGTTCTATCATTGGCGCAACTTCTGTTAACCAACTGAAGGAGGACATTGATGCTTTTCTGTCAACCGAGAGGCCTTTACCAGCAGAACTGGCGGCTGATATCGAAGATATTTACAACAGATACCGAGATCCTACTTTTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

376

Amino Acids

42.28

Weight (kDa)

8.12

Isoelectric Point (pI)

40.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 65 - 367 2.8e-50 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 431
AccB7I CCANNNNNTGG 1 cut(s) 779
AccI GTMKAC 1 cut(s) 670
AccII CGCG 2 cut(s) 334, 384
AccIII TCCGGA 1 cut(s) 96
AciI CCGC 7 cut(s) 18, 39, 42, 84, 334, 382, 1079
AclWI GGATC 3 cut(s) 287, 978, 1109
AcoI YGGCCR 1 cut(s) 551
AcsI RAATTY 2 cut(s) 252, 543
AcuI CTGAAG 2 cut(s) 321, 1043
AcyI GRCGYC 1 cut(s) 428
AfaI GTAC 4 cut(s) 158, 580, 803, 908
AfiI CCNNNNNNNGG 4 cut(s) 145, 779, 888, 1024
AflII CTTAAG 1 cut(s) 506
AgsI TTSAA 4 cut(s) 647, 710, 725, 844
AjnI CCWGG 2 cut(s) 853, 887
AjuI GAANNNNNNNTTGG 4 cut(s) 186, 218, 380, 412
AluBI AGCT 9 cut(s) 102, 166, 231, 261, 305, 363, 764, 788, 949
AluI AGCT 9 cut(s) 102, 166, 231, 261, 305, 363, 764, 788, 949
Alw21I GWGCWC 2 cut(s) 104, 790
Alw26I GTCTC 5 cut(s) 323, 378, 419, 505, 596
AlwI GGATC 3 cut(s) 287, 978, 1109
Aor13HI TCCGGA 1 cut(s) 96
AoxI GGCC 2 cut(s) 551, 1058
ApeKI GCWGC 2 cut(s) 473, 824
ApoI RAATTY 2 cut(s) 252, 543
Asp700I GAANNNNTTC 1 cut(s) 848
AspLEI GCGC 3 cut(s) 14, 247, 1004
AspS9I GGNCC 2 cut(s) 136, 178
AsuHPI GGTGA 3 cut(s) 45, 233, 976
AvaII GGWCC 2 cut(s) 136, 178
BalI TGGCCA 1 cut(s) 553
BanII GRGCYC 2 cut(s) 104, 790
BbsI GAAGAC 1 cut(s) 149
Bbv12I GWGCWC 2 cut(s) 104, 790
BbvI GCAGC 2 cut(s) 460, 811
BccI CCATC 2 cut(s) 128, 613
BceAI ACGGC 1 cut(s) 162
BciT130I CCWGG 2 cut(s) 855, 889
BcoDI GTCTC 5 cut(s) 323, 378, 419, 505, 596
BfaI CTAG 2 cut(s) 432, 761
BfrI CTTAAG 1 cut(s) 506
BisI GCNGC 5 cut(s) 39, 42, 474, 825, 1080
BlsI GCNGC 5 cut(s) 40, 43, 475, 826, 1081
Bme1390I CCNGG 2 cut(s) 855, 889
Bme18I GGWCC 2 cut(s) 136, 178
BmgT120I GGNCC 2 cut(s) 136, 178
BmrFI CCNGG 2 cut(s) 855, 889
BmsI GCATC 3 cut(s) 460, 811, 1027
BpiI GAAGAC 1 cut(s) 149
BplI GAGNNNNNCTC 2 cut(s) 215, 247
BpmI CTGGAG 1 cut(s) 924
BpuEI CTTGAG 1 cut(s) 481
BsaHI GRCGYC 1 cut(s) 428
BsaJI CCNNGG 2 cut(s) 853, 888
BsaWI WCCGGW 3 cut(s) 96, 159, 794
Bsc4I CCNNNNNNNGG 4 cut(s) 145, 779, 888, 1024
Bse1I ACTGG 3 cut(s) 941, 987, 1080
Bse3DI GCAATG 2 cut(s) 354, 882
BseAI TCCGGA 1 cut(s) 96
BseBI CCWGG 2 cut(s) 855, 889
BseDI CCNNGG 2 cut(s) 853, 888
BseGI GGATG 1 cut(s) 475
BseLI CCNNNNNNNGG 4 cut(s) 145, 779, 888, 1024
BseMI GCAATG 2 cut(s) 354, 882
BseMII CTCAG 3 cut(s) 121, 271, 389
BseNI ACTGG 3 cut(s) 941, 987, 1080
BseXI GCAGC 2 cut(s) 460, 811
Bsh1236I CGCG 2 cut(s) 334, 384
BshFI GGCC 2 cut(s) 553, 1060
BsiHKAI GWGCWC 2 cut(s) 104, 790
BsiSI CCGG 3 cut(s) 97, 160, 795
BslI CCNNNNNNNGG 4 cut(s) 145, 779, 888, 1024
BsmAI GTCTC 5 cut(s) 323, 378, 419, 505, 596
BsmBI CGTCTC 2 cut(s) 323, 419
BsnI GGCC 2 cut(s) 553, 1060
Bsp1286I GDGCHC 2 cut(s) 104, 790
Bsp13I TCCGGA 1 cut(s) 96
Bsp143I GATC 7 cut(s) 279, 532, 556, 660, 715, 970, 1114
BspACI CCGC 7 cut(s) 18, 39, 42, 84, 334, 382, 1079
BspANI GGCC 2 cut(s) 553, 1060
BspCNI CTCAG 3 cut(s) 120, 270, 388
BspEI TCCGGA 1 cut(s) 96
BspFNI CGCG 2 cut(s) 334, 384
BspPI GGATC 3 cut(s) 287, 978, 1109
BspTI CTTAAG 1 cut(s) 506
BsrDI GCAATG 2 cut(s) 354, 882
BsrI ACTGG 3 cut(s) 941, 987, 1080
BssECI CCNNGG 2 cut(s) 853, 888
BssMI GATC 7 cut(s) 279, 532, 556, 660, 715, 970, 1114
BssNAI GTATAC 1 cut(s) 671
BssNI GRCGYC 1 cut(s) 428
Bst1107I GTATAC 1 cut(s) 671
Bst2UI CCWGG 2 cut(s) 855, 889
Bst4CI ACNGT 1 cut(s) 686
Bst6I CTCTTC 1 cut(s) 854
BstACI GRCGYC 1 cut(s) 428
BstAFI CTTAAG 1 cut(s) 506
BstC8I GCNNGC 3 cut(s) 361, 365, 951
BstDEI CTNAG 3 cut(s) 107, 257, 375
BstF5I GGATG 1 cut(s) 475
BstFNI CGCG 2 cut(s) 334, 384
BstHHI GCGC 3 cut(s) 14, 247, 1004
BstKTI GATC 7 cut(s) 282, 535, 559, 663, 718, 973, 1117
BstMAI GTCTC 5 cut(s) 323, 378, 419, 505, 596
BstMBI GATC 7 cut(s) 279, 532, 556, 660, 715, 970, 1114
BstMWI GCNNNNNNNGC 5 cut(s) 11, 99, 785, 893, 1076
BstNI CCWGG 2 cut(s) 855, 889
BstSCI CCNGG 2 cut(s) 853, 887
BstUI CGCG 2 cut(s) 334, 384
BstV1I GCAGC 2 cut(s) 460, 811
BstV2I GAAGAC 1 cut(s) 149
BstX2I RGATCY 1 cut(s) 1114
BstYI RGATCY 1 cut(s) 1114
BstZ17I GTATAC 1 cut(s) 671
BsuRI GGCC 2 cut(s) 553, 1060
BtsCI GGATG 1 cut(s) 475
BtsI GCAGTG 2 cut(s) 123, 294
BtsIMutI CAGTG 2 cut(s) 123, 294
Cac8I GCNNGC 3 cut(s) 361, 365, 951
CfoI GCGC 3 cut(s) 14, 247, 1004
Cfr13I GGNCC 2 cut(s) 136, 178
CseI GACGC 1 cut(s) 340
Csp6I GTAC 4 cut(s) 157, 579, 802, 907
CviAII CATG 1 cut(s) 862
CviQI GTAC 4 cut(s) 157, 579, 802, 907
DdeI CTNAG 3 cut(s) 107, 257, 375
DpnI GATC 7 cut(s) 281, 534, 558, 662, 717, 972, 1116
DpnII GATC 7 cut(s) 279, 532, 556, 660, 715, 970, 1114
EaeI YGGCCR 1 cut(s) 551
Eam1104I CTCTTC 1 cut(s) 854
EarI CTCTTC 1 cut(s) 854
Ecl136II GAGCTC 2 cut(s) 102, 788
Eco147I AGGCCT 1 cut(s) 1060
Eco24I GRGCYC 2 cut(s) 104, 790
Eco32I GATATC 1 cut(s) 1087
Eco47I GGWCC 2 cut(s) 136, 178
Eco53kI GAGCTC 2 cut(s) 102, 788
Eco57I CTGAAG 2 cut(s) 321, 1043
EcoICRI GAGCTC 2 cut(s) 102, 788
EcoRII CCWGG 2 cut(s) 853, 887
EcoRV GATATC 1 cut(s) 1087
EcoT38I GRGCYC 2 cut(s) 104, 790
Esp3I CGTCTC 2 cut(s) 323, 419
FaeI CATG 1 cut(s) 865
FaiI YATR 7 cut(s) 412, 564, 586, 610, 671, 863, 873
FatI CATG 1 cut(s) 861
FauI CCCGC 2 cut(s) 327, 389
FblI GTMKAC 1 cut(s) 670
Fnu4HI GCNGC 5 cut(s) 39, 42, 474, 825, 1080
FokI GGATG 1 cut(s) 482
FriOI GRGCYC 2 cut(s) 104, 790
Fsp4HI GCNGC 5 cut(s) 39, 42, 474, 825, 1080
FspBI CTAG 2 cut(s) 432, 761
GlaI GCGC 3 cut(s) 13, 246, 1003
GluI GCNGC 5 cut(s) 39, 42, 474, 825, 1080
GsuI CTGGAG 1 cut(s) 924
HaeIII GGCC 2 cut(s) 553, 1060
HapII CCGG 3 cut(s) 97, 160, 795
HgaI GACGC 1 cut(s) 340
HhaI GCGC 3 cut(s) 14, 247, 1004
Hin1I GRCGYC 1 cut(s) 428
Hin1II CATG 1 cut(s) 865
Hin6I GCGC 3 cut(s) 12, 245, 1002
HinP1I GCGC 3 cut(s) 12, 245, 1002
HincII GTYRAC 2 cut(s) 1015, 1050
HindII GTYRAC 2 cut(s) 1015, 1050
HindIII AAGCTT 1 cut(s) 303
HinfI GANTC 5 cut(s) 173, 313, 513, 844, 937
HpaI GTTAAC 1 cut(s) 1015
HpaII CCGG 3 cut(s) 97, 160, 795
HphI GGTGA 3 cut(s) 45, 233, 976
Hpy166II GTNNAC 3 cut(s) 671, 1015, 1050
Hpy188I TCNGA 6 cut(s) 110, 178, 235, 424, 792, 820
Hpy188III TCNNGA 2 cut(s) 97, 460
Hpy8I GTNNAC 3 cut(s) 671, 1015, 1050
HpyAV CCTTC 4 cut(s) 31, 319, 641, 1018
HpyCH4III ACNGT 1 cut(s) 686
HpyCH4IV ACGT 3 cut(s) 215, 428, 581
HpyCH4V TGCA 8 cut(s) 30, 154, 452, 476, 541, 827, 953, 965
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 99, 785, 893, 1076
HpyF3I CTNAG 3 cut(s) 107, 257, 375
HpySE526I ACGT 3 cut(s) 215, 428, 581
Hsp92I GRCGYC 1 cut(s) 428
Hsp92II CATG 1 cut(s) 865
HspAI GCGC 3 cut(s) 12, 245, 1002
Kpn2I TCCGGA 1 cut(s) 96
KspAI GTTAAC 1 cut(s) 1015
Kzo9I GATC 7 cut(s) 279, 532, 556, 660, 715, 970, 1114
LmnI GCTCC 2 cut(s) 99, 785
Lsp1109I GCAGC 2 cut(s) 460, 811
LweI GCATC 3 cut(s) 460, 811, 1027
MaeI CTAG 2 cut(s) 432, 761
MaeII ACGT 3 cut(s) 215, 428, 581
MaeIII GTNAC 2 cut(s) 443, 565
MalI GATC 7 cut(s) 281, 534, 558, 662, 717, 972, 1116
MboI GATC 7 cut(s) 279, 532, 556, 660, 715, 970, 1114
MboII GAAGA 5 cut(s) 154, 334, 400, 841, 1103
MflI RGATCY 1 cut(s) 1114
MhlI GDGCHC 2 cut(s) 104, 790
MlsI TGGCCA 1 cut(s) 553
MluCI AATT 6 cut(s) 186, 252, 543, 679, 711, 814
MluNI TGGCCA 1 cut(s) 553
MlyI GAGTC 3 cut(s) 167, 507, 931
Mox20I TGGCCA 1 cut(s) 553
MroI TCCGGA 1 cut(s) 96
MroXI GAANNNNTTC 1 cut(s) 848
MscI TGGCCA 1 cut(s) 553
MseI TTAA 4 cut(s) 47, 507, 1014, 1129
Msp20I TGGCCA 1 cut(s) 553
MspA1I CMGCKG 1 cut(s) 363
MspCI CTTAAG 1 cut(s) 506
MspI CCGG 3 cut(s) 97, 160, 795
MspR9I CCNGG 2 cut(s) 855, 889
MvaI CCWGG 2 cut(s) 855, 889
MvnI CGCG 2 cut(s) 334, 384
MwoI GCNNNNNNNGC 5 cut(s) 11, 99, 785, 893, 1076
NdeII GATC 7 cut(s) 279, 532, 556, 660, 715, 970, 1114
NlaIII CATG 1 cut(s) 865
NmeAIII GCCGAG 2 cut(s) 147, 495
NmuCI GTSAC 1 cut(s) 443
PceI AGGCCT 1 cut(s) 1060
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PdmI GAANNNNTTC 1 cut(s) 848
PfeI GAWTC 2 cut(s) 313, 844
PflMI CCANNNNNTGG 1 cut(s) 779
PkrI GCNGC 5 cut(s) 40, 43, 475, 826, 1081
PleI GAGTC 3 cut(s) 167, 507, 931
PpsI GAGTC 3 cut(s) 167, 507, 931
Psp124BI GAGCTC 2 cut(s) 104, 790
Psp6I CCWGG 2 cut(s) 853, 887
PspGI CCWGG 2 cut(s) 853, 887
PspPI GGNCC 2 cut(s) 136, 178
PsuI RGATCY 1 cut(s) 1114
PvuII CAGCTG 1 cut(s) 363
RsaI GTAC 4 cut(s) 158, 580, 803, 908
RsaNI GTAC 4 cut(s) 157, 579, 802, 907
SacI GAGCTC 2 cut(s) 104, 790
SaqAI TTAA 4 cut(s) 47, 507, 1014, 1129
SatI GCNGC 5 cut(s) 39, 42, 474, 825, 1080
Sau3AI GATC 7 cut(s) 279, 532, 556, 660, 715, 970, 1114
Sau96I GGNCC 2 cut(s) 136, 178
SchI GAGTC 3 cut(s) 167, 507, 931
ScrFI CCNGG 2 cut(s) 855, 889
SduI GDGCHC 2 cut(s) 104, 790
SfaNI GCATC 3 cut(s) 460, 811, 1027
SinI GGWCC 2 cut(s) 136, 178
SmlI CTYRAG 2 cut(s) 460, 506
SmoI CTYRAG 2 cut(s) 460, 506
Sse9I AATT 6 cut(s) 186, 252, 543, 679, 711, 814
SseBI AGGCCT 1 cut(s) 1060
SsiI CCGC 7 cut(s) 18, 39, 42, 84, 334, 382, 1079
SspI AATATT 1 cut(s) 481
SspMI CTAG 2 cut(s) 432, 761
SstI GAGCTC 2 cut(s) 104, 790
StuI AGGCCT 1 cut(s) 1060
StyD4I CCNGG 2 cut(s) 853, 887
TaaI ACNGT 1 cut(s) 686
TaiI ACGT 3 cut(s) 218, 431, 584
TaqI TCGA 5 cut(s) 67, 183, 270, 912, 1089
TasI AATT 6 cut(s) 186, 252, 543, 679, 711, 814
TatI WGTACW 2 cut(s) 801, 906
TauI GCSGC 3 cut(s) 41, 44, 1082
TfiI GAWTC 2 cut(s) 313, 844
Tru1I TTAA 4 cut(s) 47, 507, 1014, 1129
Tru9I TTAA 4 cut(s) 47, 507, 1014, 1129
TscAI CASTG 2 cut(s) 130, 301
TseFI GTSAC 1 cut(s) 443
TseI GCWGC 2 cut(s) 473, 824
Tsp45I GTSAC 1 cut(s) 443
TspDTI ATGAA 4 cut(s) 335, 536, 597, 970
TspGWI ACGGA 1 cut(s) 627
TspRI CASTG 2 cut(s) 130, 301
Van91I CCANNNNNTGG 1 cut(s) 779
Vha464I CTTAAG 1 cut(s) 506
VpaK11BI GGWCC 2 cut(s) 136, 178
XapI RAATTY 2 cut(s) 252, 543
XmiI GTMKAC 1 cut(s) 670
XmnI GAANNNNTTC 1 cut(s) 848
XspI CTAG 2 cut(s) 432, 761
ZraI GACGTC 1 cut(s) 429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.