RLG00000009769

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0003777
Physical Location & Seq
Reverse (-)
57526467 .. 57547058
20592 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009769

Sequence Viewer

Length: 885 bp
ATGGCCTCATGCGCCACTGCTTTTCTCTACAACCACGCCGCCTCATTAACCTCACCTTGCTCTCCTGGCAGAACCAGAACCACCGCAAGAAGCTTCCGGAAGCGGAGGAGCTCTCTCAGACCAACCACCATCACTGCCAAGCAGGACCAGAAGACGGCGTTGCAGTACCGGAAGCTCGGCGCCTCGGACCTCGAAATTAGCGAAATTACTCCGGGCACAATGACGTTCGGTCAGCAAAACACAGAGAAAGAAGCTCACGAAATTCTCAGCTACGCTTTCGACAATGGGATCAACATTTTGGACACTGCCAAAGCTTACCCGATTCCAATGAAGAAGGAGACGCAGGGATTGACTGACGTGTACATTGCTAGCTGGCTAGAGTCTCAGCCCCGCGAGAAGTCACCGATTTTCGTTACTGTGGCGACAAAAGGATGTGGGTATTCAGAGAGGGCTAGTTATCTGCGTGACAATGCAAAGGTCCTGAGGGTGGATGCTGCAAACACTAGAGCCAGATGCTATGTTGCACTATTTGGTGAGTATTGTTATGATCCTTCCAAATGGAGGCCAAGTGTGCCATTTGTGGAGCAACTGAAGGCTCTTCAAGAAGTCGTTGATGAAGGAAAGGATTGCTGGTATGAGAGCCCATGCCACAGCGCCAGCGCCTCAGTAGCTGCTAGTGTGAGAAGGAGAGGCAGCGGCACCAAAATGGCACCCATCAAAGTACATAACCGGATTAGAGCAATCACTAACCTGTACAGGCACACCATCAACTTGTGTCGCACCTACCGCAGCATGAATGTTGCTGCACATCATCATGGACAACTCATGCTGCCAATACCGGCATCGCTGAGCAAGATCAATGGGTCTATCTCCAGCTTAGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

295

Amino Acids

32.66

Weight (kDa)

9.6

Isoelectric Point (pI)

47.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 69 - 208 1.6e-11 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 179, 698, 709
AccII CGCG 1 cut(s) 393
AccIII TCCGGA 1 cut(s) 96
AciI CCGC 6 cut(s) 39, 84, 103, 391, 696, 787
AclWI GGATC 2 cut(s) 296, 542
AcsI RAATTY 1 cut(s) 261
AcuI CTGAAG 1 cut(s) 611
AcyI GRCGYC 1 cut(s) 180
AfaI GTAC 4 cut(s) 167, 362, 723, 755
AfiI CCNNNNNNNGG 3 cut(s) 154, 487, 561
AflIII ACRYGT 1 cut(s) 357
AgsI TTSAA 1 cut(s) 602
AhdI GACNNNNNGTC 1 cut(s) 228
AjiI CACGTC 1 cut(s) 358
AjnI CCWGG 1 cut(s) 64
AluBI AGCT 9 cut(s) 93, 111, 175, 254, 270, 314, 372, 671, 876
AluI AGCT 9 cut(s) 93, 111, 175, 254, 270, 314, 372, 671, 876
Alw21I GWGCWC 1 cut(s) 113
Alw26I GTCTC 2 cut(s) 332, 387
AlwI GGATC 2 cut(s) 296, 542
AlwNI CAGNNNCTG 1 cut(s) 671
Aor13HI TCCGGA 1 cut(s) 96
AoxI GGCC 2 cut(s) 3, 563
ApeKI GCWGC 6 cut(s) 494, 671, 693, 789, 803, 829
ApoI RAATTY 1 cut(s) 261
AspLEI GCGC 4 cut(s) 14, 182, 656, 662
AspS9I GGNCC 3 cut(s) 145, 187, 478
AsuC2I CCSGG 1 cut(s) 213
AsuHPI GGTGA 3 cut(s) 45, 393, 545
AsuNHI GCTAGC 1 cut(s) 368
AvaII GGWCC 3 cut(s) 145, 187, 478
AxyI CCTNAGG 1 cut(s) 482
BaeGI GKGCMC 1 cut(s) 218
BanI GGYRCC 3 cut(s) 179, 698, 709
BanII GRGCYC 2 cut(s) 113, 644
BbsI GAAGAC 1 cut(s) 158
Bbv12I GWGCWC 1 cut(s) 113
BbvI GCAGC 6 cut(s) 481, 658, 705, 790, 801, 816
BccI CCATC 3 cut(s) 137, 722, 773
BceAI ACGGC 1 cut(s) 171
BciT130I CCWGG 1 cut(s) 66
BcnI CCSGG 1 cut(s) 213
BcoDI GTCTC 2 cut(s) 332, 387
BfaI CTAG 5 cut(s) 369, 377, 453, 504, 675
BfoI RGCGCY 3 cut(s) 183, 657, 663
BisI GCNGC 8 cut(s) 39, 495, 672, 694, 697, 790, 804, 830
BlpI GCTNAGC 2 cut(s) 848, 877
BlsI GCNGC 8 cut(s) 40, 496, 673, 695, 698, 791, 805, 831
Bme1390I CCNGG 2 cut(s) 66, 213
Bme18I GGWCC 3 cut(s) 145, 187, 478
BmeRI GACNNNNNGTC 1 cut(s) 228
BmgBI CACGTC 1 cut(s) 358
BmgT120I GGNCC 3 cut(s) 145, 187, 478
BmiI GGNNCC 3 cut(s) 181, 700, 711
BmrFI CCNGG 2 cut(s) 66, 213
BmsI GCATC 3 cut(s) 481, 503, 851
BmtI GCTAGC 1 cut(s) 372
BpiI GAAGAC 1 cut(s) 158
BplI GAGNNNNNCTC 2 cut(s) 97, 129
BpmI CTGGAG 1 cut(s) 856
Bpu1102I GCTNAGC 2 cut(s) 848, 877
BpuMI CCSGG 1 cut(s) 213
BsaHI GRCGYC 1 cut(s) 180
BsaJI CCNNGG 1 cut(s) 183
BsaWI WCCGGW 3 cut(s) 96, 168, 729
BsaXI ACNNNNNCTCC 2 cut(s) 553, 583
Bsc4I CCNNNNNNNGG 3 cut(s) 154, 487, 561
Bse118I RCCGGY 1 cut(s) 838
Bse21I CCTNAGG 1 cut(s) 482
Bse3DI GCAATG 1 cut(s) 363
BseAI TCCGGA 1 cut(s) 96
BseBI CCWGG 1 cut(s) 66
BseDI CCNNGG 1 cut(s) 183
BseGI GGATG 2 cut(s) 437, 496
BseLI CCNNNNNNNGG 3 cut(s) 154, 487, 561
BseMI GCAATG 1 cut(s) 363
BseMII CTCAG 6 cut(s) 130, 280, 398, 473, 678, 839
BseRI GAGGAG 1 cut(s) 121
BseSI GKGCMC 1 cut(s) 218
BseXI GCAGC 6 cut(s) 481, 658, 705, 790, 801, 816
BsgI GTGCAG 1 cut(s) 789
Bsh1236I CGCG 1 cut(s) 393
BshFI GGCC 2 cut(s) 5, 565
BshNI GGYRCC 3 cut(s) 179, 698, 709
BsiHKAI GWGCWC 1 cut(s) 113
BsiSI CCGG 5 cut(s) 97, 169, 212, 730, 839
BslI CCNNNNNNNGG 3 cut(s) 154, 487, 561
BsmAI GTCTC 2 cut(s) 332, 387
BsmBI CGTCTC 1 cut(s) 332
BsnI GGCC 2 cut(s) 5, 565
Bsp1286I GDGCHC 3 cut(s) 113, 218, 644
Bsp13I TCCGGA 1 cut(s) 96
Bsp1407I TGTACA 2 cut(s) 360, 753
Bsp143I GATC 3 cut(s) 288, 547, 855
Bsp1720I GCTNAGC 2 cut(s) 848, 877
BspACI CCGC 6 cut(s) 39, 84, 103, 391, 696, 787
BspANI GGCC 2 cut(s) 5, 565
BspCNI CTCAG 6 cut(s) 129, 279, 397, 474, 677, 840
BspEI TCCGGA 1 cut(s) 96
BspFNI CGCG 1 cut(s) 393
BspLI GGNNCC 3 cut(s) 181, 700, 711
BspOI GCTAGC 1 cut(s) 372
BspPI GGATC 2 cut(s) 296, 542
BspQI GCTCTTC 1 cut(s) 603
BspT107I GGYRCC 3 cut(s) 179, 698, 709
BsrDI GCAATG 1 cut(s) 363
BsrFI RCCGGY 1 cut(s) 838
BsrGI TGTACA 2 cut(s) 360, 753
BssAI RCCGGY 1 cut(s) 838
BssECI CCNNGG 1 cut(s) 183
BssMI GATC 3 cut(s) 288, 547, 855
BssNI GRCGYC 1 cut(s) 180
Bst2UI CCWGG 1 cut(s) 66
Bst4CI ACNGT 1 cut(s) 418
Bst6I CTCTTC 1 cut(s) 603
BstACI GRCGYC 1 cut(s) 180
BstAUI TGTACA 2 cut(s) 360, 753
BstC8I GCNNGC 3 cut(s) 370, 374, 658
BstDEI CTNAG 7 cut(s) 116, 266, 384, 482, 664, 848, 877
BstF5I GGATG 2 cut(s) 437, 496
BstFNI CGCG 1 cut(s) 393
BstH2I RGCGCY 3 cut(s) 183, 657, 663
BstHHI GCGC 4 cut(s) 14, 182, 656, 662
BstKTI GATC 3 cut(s) 291, 550, 858
BstMAI GTCTC 2 cut(s) 332, 387
BstMBI GATC 3 cut(s) 288, 547, 855
BstMWI GCNNNNNNNGC 5 cut(s) 11, 66, 571, 668, 786
BstNI CCWGG 1 cut(s) 66
BstSCI CCNGG 2 cut(s) 64, 211
BstSLI GKGCMC 1 cut(s) 218
BstUI CGCG 1 cut(s) 393
BstV1I GCAGC 6 cut(s) 481, 658, 705, 790, 801, 816
BstV2I GAAGAC 1 cut(s) 158
Bsu36I CCTNAGG 1 cut(s) 482
BsuRI GGCC 2 cut(s) 5, 565
BtgZI GCGATG 1 cut(s) 828
BtrI CACGTC 1 cut(s) 358
BtsCI GGATG 2 cut(s) 437, 496
BtsI GCAGTG 3 cut(s) 15, 132, 303
BtsIMutI CAGTG 3 cut(s) 15, 132, 303
Cac8I GCNNGC 3 cut(s) 370, 374, 658
CaiI CAGNNNCTG 1 cut(s) 671
CfoI GCGC 4 cut(s) 14, 182, 656, 662
Cfr10I RCCGGY 1 cut(s) 838
Cfr13I GGNCC 3 cut(s) 145, 187, 478
CseI GACGC 1 cut(s) 349
Csp6I GTAC 4 cut(s) 166, 361, 722, 754
CviAII CATG 5 cut(s) 9, 645, 793, 815, 826
CviQI GTAC 4 cut(s) 166, 361, 722, 754
DdeI CTNAG 7 cut(s) 116, 266, 384, 482, 664, 848, 877
DinI GGCGCC 1 cut(s) 181
DpnI GATC 3 cut(s) 290, 549, 857
DpnII GATC 3 cut(s) 288, 547, 855
DriI GACNNNNNGTC 1 cut(s) 228
Eam1104I CTCTTC 1 cut(s) 603
Eam1105I GACNNNNNGTC 1 cut(s) 228
EarI CTCTTC 1 cut(s) 603
Ecl136II GAGCTC 1 cut(s) 111
Eco24I GRGCYC 2 cut(s) 113, 644
Eco47I GGWCC 3 cut(s) 145, 187, 478
Eco53kI GAGCTC 1 cut(s) 111
Eco57I CTGAAG 1 cut(s) 611
Eco81I CCTNAGG 1 cut(s) 482
EcoICRI GAGCTC 1 cut(s) 111
EcoO109I RGGNCCY 1 cut(s) 478
EcoRII CCWGG 1 cut(s) 64
EcoT38I GRGCYC 2 cut(s) 113, 644
EgeI GGCGCC 1 cut(s) 181
EheI GGCGCC 1 cut(s) 181
Esp3I CGTCTC 1 cut(s) 332
FaeI CATG 5 cut(s) 12, 648, 796, 818, 829
FaiI YATR 9 cut(s) 10, 519, 546, 636, 646, 726, 794, 816, 827
FatI CATG 5 cut(s) 8, 644, 792, 814, 825
FauI CCCGC 1 cut(s) 398
Fnu4HI GCNGC 8 cut(s) 39, 495, 672, 694, 697, 790, 804, 830
FokI GGATG 2 cut(s) 444, 503
FriOI GRGCYC 2 cut(s) 113, 644
Fsp4HI GCNGC 8 cut(s) 39, 495, 672, 694, 697, 790, 804, 830
FspBI CTAG 5 cut(s) 369, 377, 453, 504, 675
GlaI GCGC 4 cut(s) 13, 181, 655, 661
GluI GCNGC 8 cut(s) 39, 495, 672, 694, 697, 790, 804, 830
GsuI CTGGAG 1 cut(s) 856
HaeII RGCGCY 3 cut(s) 183, 657, 663
HaeIII GGCC 2 cut(s) 5, 565
HapII CCGG 5 cut(s) 97, 169, 212, 730, 839
HgaI GACGC 1 cut(s) 349
HhaI GCGC 4 cut(s) 14, 182, 656, 662
Hin1I GRCGYC 1 cut(s) 180
Hin1II CATG 5 cut(s) 12, 648, 796, 818, 829
Hin6I GCGC 4 cut(s) 12, 180, 654, 660
HinP1I GCGC 4 cut(s) 12, 180, 654, 660
HindIII AAGCTT 2 cut(s) 91, 312
HinfI GANTC 2 cut(s) 322, 380
HpaII CCGG 5 cut(s) 97, 169, 212, 730, 839
HphI GGTGA 3 cut(s) 45, 393, 545
Hpy166II GTNNAC 1 cut(s) 361
Hpy188I TCNGA 3 cut(s) 119, 187, 445
Hpy188III TCNNGA 4 cut(s) 97, 257, 481, 602
Hpy8I GTNNAC 1 cut(s) 361
HpyAV CCTTC 5 cut(s) 328, 561, 586, 611, 678
HpyCH4III ACNGT 1 cut(s) 418
HpyCH4IV ACGT 2 cut(s) 224, 357
HpyCH4V TGCA 5 cut(s) 163, 473, 497, 524, 806
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 66, 571, 668, 786
HpyF3I CTNAG 7 cut(s) 116, 266, 384, 482, 664, 848, 877
HpySE526I ACGT 2 cut(s) 224, 357
Hsp92I GRCGYC 1 cut(s) 180
Hsp92II CATG 5 cut(s) 12, 648, 796, 818, 829
HspAI GCGC 4 cut(s) 12, 180, 654, 660
KasI GGCGCC 1 cut(s) 179
Kpn2I TCCGGA 1 cut(s) 96
Kzo9I GATC 3 cut(s) 288, 547, 855
LguI GCTCTTC 1 cut(s) 603
LmnI GCTCC 2 cut(s) 108, 583
Lsp1109I GCAGC 6 cut(s) 481, 658, 705, 790, 801, 816
LweI GCATC 3 cut(s) 481, 503, 851
MaeI CTAG 5 cut(s) 369, 377, 453, 504, 675
MaeII ACGT 2 cut(s) 224, 357
MaeIII GTNAC 3 cut(s) 399, 412, 464
MalI GATC 3 cut(s) 290, 549, 857
MboI GATC 3 cut(s) 288, 547, 855
MboII GAAGA 3 cut(s) 163, 343, 590
MhlI GDGCHC 3 cut(s) 113, 218, 644
MluCI AATT 3 cut(s) 195, 204, 261
Mly113I GGCGCC 1 cut(s) 180
MlyI GAGTC 1 cut(s) 389
MroI TCCGGA 1 cut(s) 96
MseI TTAA 1 cut(s) 47
MslI CAYNNNNRTG 2 cut(s) 704, 813
MspA1I CMGCKG 1 cut(s) 696
MspI CCGG 5 cut(s) 97, 169, 212, 730, 839
MspR9I CCNGG 2 cut(s) 66, 213
MvaI CCWGG 1 cut(s) 66
MvnI CGCG 1 cut(s) 393
MwoI GCNNNNNNNGC 5 cut(s) 11, 66, 571, 668, 786
NarI GGCGCC 1 cut(s) 180
NciI CCSGG 1 cut(s) 213
NdeII GATC 3 cut(s) 288, 547, 855
NheI GCTAGC 1 cut(s) 368
NlaIII CATG 5 cut(s) 12, 648, 796, 818, 829
NlaIV GGNNCC 3 cut(s) 181, 700, 711
NmeAIII GCCGAG 1 cut(s) 156
NmuCI GTSAC 2 cut(s) 399, 464
PciSI GCTCTTC 1 cut(s) 603
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PfeI GAWTC 1 cut(s) 322
PkrI GCNGC 8 cut(s) 40, 496, 673, 695, 698, 791, 805, 831
PleI GAGTC 1 cut(s) 388
PluTI GGCGCC 1 cut(s) 183
PpsI GAGTC 1 cut(s) 388
PpuMI RGGWCCY 1 cut(s) 478
Psp124BI GAGCTC 1 cut(s) 113
Psp5II RGGWCCY 1 cut(s) 478
Psp6I CCWGG 1 cut(s) 64
PspGI CCWGG 1 cut(s) 64
PspN4I GGNNCC 3 cut(s) 181, 700, 711
PspPI GGNCC 3 cut(s) 145, 187, 478
PspPPI RGGWCCY 1 cut(s) 478
PstNI CAGNNNCTG 1 cut(s) 671
RsaI GTAC 4 cut(s) 167, 362, 723, 755
RsaNI GTAC 4 cut(s) 166, 361, 722, 754
RseI CAYNNNNRTG 2 cut(s) 704, 813
SacI GAGCTC 1 cut(s) 113
SapI GCTCTTC 1 cut(s) 603
SaqAI TTAA 1 cut(s) 47
SatI GCNGC 8 cut(s) 39, 495, 672, 694, 697, 790, 804, 830
Sau3AI GATC 3 cut(s) 288, 547, 855
Sau96I GGNCC 3 cut(s) 145, 187, 478
SchI GAGTC 1 cut(s) 389
ScrFI CCNGG 2 cut(s) 66, 213
SduI GDGCHC 3 cut(s) 113, 218, 644
SfaNI GCATC 3 cut(s) 481, 503, 851
SfoI GGCGCC 1 cut(s) 181
SinI GGWCC 3 cut(s) 145, 187, 478
SmiMI CAYNNNNRTG 2 cut(s) 704, 813
Sse9I AATT 3 cut(s) 195, 204, 261
SsiI CCGC 6 cut(s) 39, 84, 103, 391, 696, 787
SspDI GGCGCC 1 cut(s) 179
SspMI CTAG 5 cut(s) 369, 377, 453, 504, 675
SstI GAGCTC 1 cut(s) 113
StyD4I CCNGG 2 cut(s) 64, 211
TaaI ACNGT 1 cut(s) 418
TaiI ACGT 2 cut(s) 227, 360
TaqI TCGA 2 cut(s) 192, 279
TaqII GACCGA 1 cut(s) 218
TasI AATT 3 cut(s) 195, 204, 261
TatI WGTACW 3 cut(s) 360, 721, 753
TauI GCSGC 2 cut(s) 41, 699
TfiI GAWTC 1 cut(s) 322
Tru1I TTAA 1 cut(s) 47
Tru9I TTAA 1 cut(s) 47
TscAI CASTG 3 cut(s) 22, 139, 310
TseFI GTSAC 2 cut(s) 399, 464
TseI GCWGC 6 cut(s) 494, 671, 693, 789, 803, 829
Tsp45I GTSAC 2 cut(s) 399, 464
TspDTI ATGAA 3 cut(s) 344, 630, 809
TspRI CASTG 3 cut(s) 22, 139, 310
VpaK11BI GGWCC 3 cut(s) 145, 187, 478
XapI RAATTY 1 cut(s) 261
XspI CTAG 5 cut(s) 369, 377, 453, 504, 675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.