Rh4DG043900

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0003777
Physical Location & Seq
Forward (+)
7146095 .. 7150727
4633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG043900.1

Sequence Viewer

Length: 1233 bp
ATGGCCTCGTGCTCCACCGCCTTCCTCTGCAACCACGCCGCCGCATTAACCTCACCTTACTCGCCTCAAAAGACCAGAACCACCGCAAGAAGCCTCCGGAGGCGGAGGAGCTCTCTCAGACCAACCACCATCACTGCCAAGCAGGACCAGAAGACGGCGTTGCAGTACCGGAAGCTCGGCGACTCGGACCTCGAAATTAGCGAAATCACTCTGGGCACAATGACGTTCGGTCAGCAAAACTCGGAGAAAGAAGCGCACGAAATTCTCAGCTACGCTTTCGACAATGGGATCAACATTTTGGACACTGCCGAAGCTTACCCGATTCCGATGAAGAAGGAGACGCAGGGATTGACTGACCTCTACATTGCCAGCTGGCTAAAGTCTCAGCCCCGCGAGAAGATTGTTTTGGCAACAAAAGTATGTGGGTATTCAGAGAGGTCTAGTTATCTGCGTGACAATGCAAAGGTCCTGAGGGTGGATGCTGCAAATATTAGAGAGAGTGTAGAGAAAAGCCTTAAGAGACTCGGCACAGATTACATTGATCTATTGCAAATTCATTGGCCAGATCGCTATGTTGCACTATTTGGTGAGTATTGTTATGATCCTTCCAAATGGAGGCCAAGCGTACCATTTGTGGAGCAACTGAAGGCTCTTCAAGAAGTTGTGGATGAAGGAAAGGTACGTTATATTGGTGTTTCCAATGAGACTTCATACGGAGTGATGGAGTTCGTACATACTGCTAAAGTTGAAGGACTACCAAAGATCGTCAGTATCCAAAACAATTACAGTCTGCTTGTTAGAACTCATTTTGAAATTGATCTTGTTGAAGTTTGCCTCCCACAACATCACAACATTGGCTTACTAGCTTATTCTCCACTTGCTGGTGGAGCTCTGACCGGAAAGTACATTGATAGCAATTCCGATGCTGCAAGAAAAGGGAGGTTGAATCTCTTCCCAGGCTACATGGAAAGATATAACAAATCCATTGCCAGGGAAGCAACAATAAAGTACATCGAACTTGCCAAAAAACACGGGCTGACTCCAGTTCAGCTTGCACTTGGATTTGCAAGGGATCGTCCATTCATGACCAGTTCTATCATTGGCGCAACTTCTGTCAACCAACTGAAAGAGGACATTGATGCTTTTCTGTCAACCGAGAGGCCTTTACCAGCAGAACTGGTGGCTGATATCGAAGATATTTACAAGAGATACCGAGATCCTACTCTTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

410

Amino Acids

46.22

Weight (kDa)

8.57

Isoelectric Point (pI)

46.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 68 - 401 3.8e-66 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 881
AccII CGCG 1 cut(s) 393
AccIII TCCGGA 1 cut(s) 96
AciI CCGC 6 cut(s) 18, 39, 42, 84, 103, 391
AclWI GGATC 4 cut(s) 296, 596, 1080, 1211
AcoI YGGCCR 1 cut(s) 560
AcsI RAATTY 2 cut(s) 261, 552
AcuI CTGAAG 1 cut(s) 665
AfaI GTAC 6 cut(s) 167, 627, 681, 732, 905, 1010
AfiI CCNNNNNNNGG 5 cut(s) 154, 475, 615, 881, 990
AflII CTTAAG 1 cut(s) 515
AgsI TTSAA 5 cut(s) 656, 749, 812, 827, 946
AhdI GACNNNNNGTC 1 cut(s) 228
AjnI CCWGG 2 cut(s) 955, 989
AjuI GAANNNNNNNTTGG 2 cut(s) 389, 421
AluBI AGCT 8 cut(s) 111, 175, 270, 314, 372, 866, 890, 1051
AluI AGCT 8 cut(s) 111, 175, 270, 314, 372, 866, 890, 1051
Alw21I GWGCWC 3 cut(s) 14, 113, 892
Alw26I GTCTC 4 cut(s) 332, 387, 514, 698
AlwI GGATC 4 cut(s) 296, 596, 1080, 1211
Aor13HI TCCGGA 1 cut(s) 96
AoxI GGCC 4 cut(s) 3, 560, 617, 1160
ApeKI GCWGC 2 cut(s) 482, 926
ApoI RAATTY 2 cut(s) 261, 552
Asp700I GAANNNNTTC 1 cut(s) 950
AspLEI GCGC 2 cut(s) 256, 1106
AspS9I GGNCC 3 cut(s) 145, 187, 466
AsuHPI GGTGA 2 cut(s) 45, 599
AvaII GGWCC 3 cut(s) 145, 187, 466
AxyI CCTNAGG 1 cut(s) 470
BaeGI GKGCMC 1 cut(s) 218
BalI TGGCCA 1 cut(s) 562
BanII GRGCYC 2 cut(s) 113, 892
BarI GAAGNNNNNNTAC 2 cut(s) 663, 695
BauI CACGAG 1 cut(s) 7
BbsI GAAGAC 1 cut(s) 158
Bbv12I GWGCWC 3 cut(s) 14, 113, 892
BbvI GCAGC 2 cut(s) 469, 913
BccI CCATC 2 cut(s) 137, 715
BceAI ACGGC 1 cut(s) 171
BciT130I CCWGG 2 cut(s) 957, 991
BciVI GTATCC 1 cut(s) 782
BcoDI GTCTC 4 cut(s) 332, 387, 514, 698
BfaI CTAG 2 cut(s) 441, 863
BfrI CTTAAG 1 cut(s) 515
BfuI GTATCC 1 cut(s) 782
BisI GCNGC 4 cut(s) 39, 42, 483, 927
BlsI GCNGC 4 cut(s) 40, 43, 484, 928
Bme1390I CCNGG 2 cut(s) 957, 991
Bme18I GGWCC 3 cut(s) 145, 187, 466
BmeRI GACNNNNNGTC 1 cut(s) 228
BmgT120I GGNCC 3 cut(s) 145, 187, 466
BmrFI CCNGG 2 cut(s) 957, 991
BmsI GCATC 3 cut(s) 469, 913, 1129
BpiI GAAGAC 1 cut(s) 158
BplI GAGNNNNNCTC 2 cut(s) 97, 129
BpmI CTGGAG 1 cut(s) 1026
BsaJI CCNNGG 2 cut(s) 955, 990
BsaWI WCCGGW 3 cut(s) 96, 168, 896
Bsc4I CCNNNNNNNGG 5 cut(s) 154, 475, 615, 881, 990
Bse1I ACTGG 3 cut(s) 1043, 1089, 1182
Bse21I CCTNAGG 1 cut(s) 470
Bse3DI GCAATG 2 cut(s) 363, 984
BseAI TCCGGA 1 cut(s) 96
BseBI CCWGG 2 cut(s) 957, 991
BseDI CCNNGG 2 cut(s) 955, 990
BseGI GGATG 2 cut(s) 484, 673
BseLI CCNNNNNNNGG 5 cut(s) 154, 475, 615, 881, 990
BseMI GCAATG 2 cut(s) 363, 984
BseMII CTCAG 4 cut(s) 130, 280, 398, 461
BseNI ACTGG 3 cut(s) 1043, 1089, 1182
BseRI GAGGAG 1 cut(s) 121
BseSI GKGCMC 1 cut(s) 218
BseXI GCAGC 2 cut(s) 469, 913
Bsh1236I CGCG 1 cut(s) 393
BshFI GGCC 4 cut(s) 5, 562, 619, 1162
BsiHKAI GWGCWC 3 cut(s) 14, 113, 892
BsiSI CCGG 3 cut(s) 97, 169, 897
BslI CCNNNNNNNGG 5 cut(s) 154, 475, 615, 881, 990
BsmAI GTCTC 4 cut(s) 332, 387, 514, 698
BsmBI CGTCTC 1 cut(s) 332
BsnI GGCC 4 cut(s) 5, 562, 619, 1162
Bsp1286I GDGCHC 4 cut(s) 14, 113, 218, 892
Bsp13I TCCGGA 1 cut(s) 96
Bsp143I GATC 8 cut(s) 288, 541, 565, 601, 762, 817, 1072, 1216
BspACI CCGC 6 cut(s) 18, 39, 42, 84, 103, 391
BspANI GGCC 4 cut(s) 5, 562, 619, 1162
BspCNI CTCAG 4 cut(s) 129, 279, 397, 462
BspEI TCCGGA 1 cut(s) 96
BspFNI CGCG 1 cut(s) 393
BspHI TCATGA 1 cut(s) 1083
BspPI GGATC 4 cut(s) 296, 596, 1080, 1211
BspQI GCTCTTC 1 cut(s) 657
BspTI CTTAAG 1 cut(s) 515
BsrDI GCAATG 2 cut(s) 363, 984
BsrI ACTGG 3 cut(s) 1043, 1089, 1182
BssECI CCNNGG 2 cut(s) 955, 990
BssMI GATC 8 cut(s) 288, 541, 565, 601, 762, 817, 1072, 1216
BssSI CACGAG 1 cut(s) 7
Bst2BI CACGAG 1 cut(s) 7
Bst2UI CCWGG 2 cut(s) 957, 991
Bst4CI ACNGT 1 cut(s) 788
Bst6I CTCTTC 2 cut(s) 657, 956
BstAFI CTTAAG 1 cut(s) 515
BstC8I GCNNGC 3 cut(s) 370, 374, 1053
BstDEI CTNAG 4 cut(s) 116, 266, 384, 470
BstF5I GGATG 2 cut(s) 484, 673
BstFNI CGCG 1 cut(s) 393
BstHHI GCGC 2 cut(s) 256, 1106
BstKTI GATC 8 cut(s) 291, 544, 568, 604, 765, 820, 1075, 1219
BstMAI GTCTC 4 cut(s) 332, 387, 514, 698
BstMBI GATC 8 cut(s) 288, 541, 565, 601, 762, 817, 1072, 1216
BstMWI GCNNNNNNNGC 2 cut(s) 887, 995
BstNI CCWGG 2 cut(s) 957, 991
BstSCI CCNGG 2 cut(s) 955, 989
BstSLI GKGCMC 1 cut(s) 218
BstUI CGCG 1 cut(s) 393
BstV1I GCAGC 2 cut(s) 469, 913
BstV2I GAAGAC 1 cut(s) 158
BstX2I RGATCY 1 cut(s) 1216
BstYI RGATCY 1 cut(s) 1216
Bsu36I CCTNAGG 1 cut(s) 470
BsuI GTATCC 1 cut(s) 782
BsuRI GGCC 4 cut(s) 5, 562, 619, 1162
BtsCI GGATG 2 cut(s) 484, 673
BtsI GCAGTG 2 cut(s) 132, 303
BtsIMutI CAGTG 2 cut(s) 132, 303
Cac8I GCNNGC 3 cut(s) 370, 374, 1053
CciI TCATGA 1 cut(s) 1083
CfoI GCGC 2 cut(s) 256, 1106
Cfr13I GGNCC 3 cut(s) 145, 187, 466
CseI GACGC 1 cut(s) 349
Csp6I GTAC 6 cut(s) 166, 626, 680, 731, 904, 1009
CviAII CATG 2 cut(s) 964, 1084
CviQI GTAC 6 cut(s) 166, 626, 680, 731, 904, 1009
DdeI CTNAG 4 cut(s) 116, 266, 384, 470
DpnI GATC 8 cut(s) 290, 543, 567, 603, 764, 819, 1074, 1218
DpnII GATC 8 cut(s) 288, 541, 565, 601, 762, 817, 1072, 1216
DriI GACNNNNNGTC 1 cut(s) 228
EaeI YGGCCR 1 cut(s) 560
Eam1104I CTCTTC 2 cut(s) 657, 956
Eam1105I GACNNNNNGTC 1 cut(s) 228
EarI CTCTTC 2 cut(s) 657, 956
EciI GGCGGA 1 cut(s) 118
Ecl136II GAGCTC 2 cut(s) 111, 890
Eco147I AGGCCT 1 cut(s) 1162
Eco24I GRGCYC 2 cut(s) 113, 892
Eco32I GATATC 1 cut(s) 1189
Eco47I GGWCC 3 cut(s) 145, 187, 466
Eco53kI GAGCTC 2 cut(s) 111, 890
Eco57I CTGAAG 1 cut(s) 665
Eco81I CCTNAGG 1 cut(s) 470
EcoICRI GAGCTC 2 cut(s) 111, 890
EcoO109I RGGNCCY 1 cut(s) 466
EcoRII CCWGG 2 cut(s) 955, 989
EcoRV GATATC 1 cut(s) 1189
EcoT38I GRGCYC 2 cut(s) 113, 892
Esp3I CGTCTC 1 cut(s) 332
FaeI CATG 2 cut(s) 967, 1087
FaiI YATR 9 cut(s) 421, 573, 600, 687, 712, 735, 965, 975, 1085
FatI CATG 2 cut(s) 963, 1083
FauI CCCGC 1 cut(s) 398
Fnu4HI GCNGC 4 cut(s) 39, 42, 483, 927
FokI GGATG 2 cut(s) 491, 680
FriOI GRGCYC 2 cut(s) 113, 892
Fsp4HI GCNGC 4 cut(s) 39, 42, 483, 927
FspBI CTAG 2 cut(s) 441, 863
GlaI GCGC 2 cut(s) 255, 1105
GluI GCNGC 4 cut(s) 39, 42, 483, 927
GsuI CTGGAG 1 cut(s) 1026
HaeIII GGCC 4 cut(s) 5, 562, 619, 1162
HapII CCGG 3 cut(s) 97, 169, 897
HgaI GACGC 1 cut(s) 349
HhaI GCGC 2 cut(s) 256, 1106
Hin1II CATG 2 cut(s) 967, 1087
Hin6I GCGC 2 cut(s) 254, 1104
HinP1I GCGC 2 cut(s) 254, 1104
HincII GTYRAC 2 cut(s) 1117, 1152
HindII GTYRAC 2 cut(s) 1117, 1152
HindIII AAGCTT 1 cut(s) 312
HinfI GANTC 5 cut(s) 182, 322, 522, 946, 1039
HpaII CCGG 3 cut(s) 97, 169, 897
HphI GGTGA 2 cut(s) 45, 599
Hpy166II GTNNAC 2 cut(s) 1117, 1152
Hpy188I TCNGA 7 cut(s) 119, 187, 244, 327, 433, 894, 922
Hpy188III TCNNGA 4 cut(s) 97, 469, 656, 1084
Hpy8I GTNNAC 2 cut(s) 1117, 1152
HpyAV CCTTC 6 cut(s) 31, 328, 615, 640, 665, 743
HpyCH4III ACNGT 1 cut(s) 788
HpyCH4IV ACGT 2 cut(s) 224, 682
HpyCH4V TGCA 9 cut(s) 30, 163, 461, 485, 550, 578, 929, 1055, 1067
HpyF10VI GCNNNNNNNGC 2 cut(s) 887, 995
HpyF3I CTNAG 4 cut(s) 116, 266, 384, 470
HpySE526I ACGT 2 cut(s) 224, 682
Hsp92II CATG 2 cut(s) 967, 1087
HspAI GCGC 2 cut(s) 254, 1104
Kpn2I TCCGGA 1 cut(s) 96
Kzo9I GATC 8 cut(s) 288, 541, 565, 601, 762, 817, 1072, 1216
LguI GCTCTTC 1 cut(s) 657
LmnI GCTCC 4 cut(s) 17, 108, 637, 887
Lsp1109I GCAGC 2 cut(s) 469, 913
LweI GCATC 3 cut(s) 469, 913, 1129
MaeI CTAG 2 cut(s) 441, 863
MaeII ACGT 2 cut(s) 224, 682
MaeIII GTNAC 1 cut(s) 452
MalI GATC 8 cut(s) 290, 543, 567, 603, 764, 819, 1074, 1218
MboI GATC 8 cut(s) 288, 541, 565, 601, 762, 817, 1072, 1216
MboII GAAGA 6 cut(s) 163, 343, 409, 644, 943, 1205
MflI RGATCY 1 cut(s) 1216
MhlI GDGCHC 4 cut(s) 14, 113, 218, 892
MlsI TGGCCA 1 cut(s) 562
MluCI AATT 6 cut(s) 195, 261, 552, 781, 813, 916
MluNI TGGCCA 1 cut(s) 562
MlyI GAGTC 3 cut(s) 176, 516, 1033
Mox20I TGGCCA 1 cut(s) 562
MroI TCCGGA 1 cut(s) 96
MroXI GAANNNNTTC 1 cut(s) 950
MscI TGGCCA 1 cut(s) 562
MseI TTAA 2 cut(s) 47, 516
Msp20I TGGCCA 1 cut(s) 562
MspA1I CMGCKG 1 cut(s) 372
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 3 cut(s) 97, 169, 897
MspR9I CCNGG 2 cut(s) 957, 991
MvaI CCWGG 2 cut(s) 957, 991
MvnI CGCG 1 cut(s) 393
MwoI GCNNNNNNNGC 2 cut(s) 887, 995
NdeII GATC 8 cut(s) 288, 541, 565, 601, 762, 817, 1072, 1216
NlaIII CATG 2 cut(s) 967, 1087
NmeAIII GCCGAG 2 cut(s) 156, 504
NmuCI GTSAC 1 cut(s) 452
PagI TCATGA 1 cut(s) 1083
PceI AGGCCT 1 cut(s) 1162
PciSI GCTCTTC 1 cut(s) 657
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PdmI GAANNNNTTC 1 cut(s) 950
PfeI GAWTC 2 cut(s) 322, 946
PflMI CCANNNNNTGG 1 cut(s) 881
PkrI GCNGC 4 cut(s) 40, 43, 484, 928
PleI GAGTC 3 cut(s) 176, 516, 1033
PpsI GAGTC 3 cut(s) 176, 516, 1033
PpuMI RGGWCCY 1 cut(s) 466
Psp124BI GAGCTC 2 cut(s) 113, 892
Psp5II RGGWCCY 1 cut(s) 466
Psp6I CCWGG 2 cut(s) 955, 989
PspGI CCWGG 2 cut(s) 955, 989
PspPI GGNCC 3 cut(s) 145, 187, 466
PspPPI RGGWCCY 1 cut(s) 466
PsuI RGATCY 1 cut(s) 1216
PvuII CAGCTG 1 cut(s) 372
RsaI GTAC 6 cut(s) 167, 627, 681, 732, 905, 1010
RsaNI GTAC 6 cut(s) 166, 626, 680, 731, 904, 1009
SacI GAGCTC 2 cut(s) 113, 892
SapI GCTCTTC 1 cut(s) 657
SaqAI TTAA 2 cut(s) 47, 516
SatI GCNGC 4 cut(s) 39, 42, 483, 927
Sau3AI GATC 8 cut(s) 288, 541, 565, 601, 762, 817, 1072, 1216
Sau96I GGNCC 3 cut(s) 145, 187, 466
SchI GAGTC 3 cut(s) 176, 516, 1033
ScrFI CCNGG 2 cut(s) 957, 991
SduI GDGCHC 4 cut(s) 14, 113, 218, 892
SfaNI GCATC 3 cut(s) 469, 913, 1129
SinI GGWCC 3 cut(s) 145, 187, 466
SmlI CTYRAG 1 cut(s) 515
SmoI CTYRAG 1 cut(s) 515
Sse9I AATT 6 cut(s) 195, 261, 552, 781, 813, 916
SseBI AGGCCT 1 cut(s) 1162
SsiI CCGC 6 cut(s) 18, 39, 42, 84, 103, 391
SspI AATATT 1 cut(s) 490
SspMI CTAG 2 cut(s) 441, 863
SstI GAGCTC 2 cut(s) 113, 892
StuI AGGCCT 1 cut(s) 1162
StyD4I CCNGG 2 cut(s) 955, 989
TaaI ACNGT 1 cut(s) 788
TaiI ACGT 2 cut(s) 227, 685
TaqI TCGA 4 cut(s) 192, 279, 1014, 1191
TaqII GACCGA 1 cut(s) 218
TasI AATT 6 cut(s) 195, 261, 552, 781, 813, 916
TatI WGTACW 2 cut(s) 903, 1008
TauI GCSGC 2 cut(s) 41, 44
TfiI GAWTC 2 cut(s) 322, 946
Tru1I TTAA 2 cut(s) 47, 516
Tru9I TTAA 2 cut(s) 47, 516
TscAI CASTG 2 cut(s) 139, 310
TseFI GTSAC 1 cut(s) 452
TseI GCWGC 2 cut(s) 482, 926
Tsp45I GTSAC 1 cut(s) 452
TspDTI ATGAA 5 cut(s) 344, 545, 684, 699, 1072
TspGWI ACGGA 1 cut(s) 729
TspRI CASTG 2 cut(s) 139, 310
Van91I CCANNNNNTGG 1 cut(s) 881
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 3 cut(s) 145, 187, 466
XapI RAATTY 2 cut(s) 261, 552
XmnI GAANNNNTTC 1 cut(s) 950
XspI CTAG 2 cut(s) 441, 863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.