Rh4AG046500

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0003777
Physical Location & Seq
Forward (+)
9801950 .. 9871647
69698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG046500.1

Sequence Viewer

Length: 864 bp
ATGGCCTCGTGCGCCACCGCCTTCCTCTGCAACCACGCCGCCGCATTAACCTCACCTTACTCGCCTCGGAAGACCAGAACCACCGCAAGAAGCCTCCGGAGCTCTCTCAGACCAACCACCATAACCGCCAAGCAGGACCAGAAGACGGCGTTGCAGTACCGGAAGCTCGGCGACTCGGACCTCGAAATTAGCGAAATCACTCTGGGCACAATGACGTTCGGTCAGCAAAACACAGAGAAAGAAGCTCACGAAATTCTCAGCTACGCTTTCGACAATGGGATCAACATTTTGGACACTTCCGAAGCTTACCCGATTCCGATGAAGAAGGAGACGCAGGGATTGACCGACCTCTATATTGCCAGCTGGCTCAAGTCTCAGTCCCGTGAGAAGATTGTTTTGGCAACAAAAGTATGTGGGTATTCAGAGAGGTCTAGTTATCTGCGTGACAATGCAAAGGTCCTGAGGGTGGATGCTGCAAATATTAGAGAGAGTGTAGAGAAAAGCCTTAAGAGACTCGGCACAGATTACATTGATCTATTGCAAATTCATTGGCCAGATCGCTATGTTGCTCTATTTGGTGAGTATTGTTATGATCCTTCCAAATGGAGGCCAAGCATACCATTTGTGGAGCAACTGAAGGCTCTTCAAGAAGTTGTGGATGAAGGAAAGGTACGTTATATTGGTGTTTCCAATGAGACTTCATACGGAGTGATGGAGTTCGTACATACTGCTAAAGTCGAAGGACTACCAAAGATCGTCAGTATCCAAAACAATTACAGTCTGCTTGTTAGAACTCATTTTGAAAGTAAGTCGTATTCTGATTCTGTAGGTAGAAAATTCAAACATTTCCTATTTATATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

287

Amino Acids

32.57

Weight (kDa)

8.79

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 65 - 266 1.5e-42 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 96
AciI CCGC 5 cut(s) 18, 39, 42, 84, 126
AclWI GGATC 2 cut(s) 287, 587
AcoI YGGCCR 1 cut(s) 551
AcsI RAATTY 3 cut(s) 252, 543, 836
AcuI CTGAAG 1 cut(s) 656
AfaI GTAC 3 cut(s) 158, 672, 723
AfiI CCNNNNNNNGG 3 cut(s) 145, 466, 606
AflII CTTAAG 1 cut(s) 506
AgsI TTSAA 3 cut(s) 647, 803, 841
AhdI GACNNNNNGTC 1 cut(s) 219
AjuI GAANNNNNNNTTGG 2 cut(s) 380, 412
AluBI AGCT 6 cut(s) 102, 166, 245, 261, 305, 363
AluI AGCT 6 cut(s) 102, 166, 245, 261, 305, 363
Alw21I GWGCWC 1 cut(s) 104
Alw26I GTCTC 4 cut(s) 323, 378, 505, 689
AlwI GGATC 2 cut(s) 287, 587
Aor13HI TCCGGA 1 cut(s) 96
AoxI GGCC 3 cut(s) 3, 551, 608
ApeKI GCWGC 1 cut(s) 473
ApoI RAATTY 3 cut(s) 252, 543, 836
AspLEI GCGC 1 cut(s) 14
AspS9I GGNCC 3 cut(s) 136, 178, 457
AsuHPI GGTGA 2 cut(s) 45, 590
AvaII GGWCC 3 cut(s) 136, 178, 457
AxyI CCTNAGG 1 cut(s) 461
BaeGI GKGCMC 1 cut(s) 209
BalI TGGCCA 1 cut(s) 553
BanII GRGCYC 1 cut(s) 104
BarI GAAGNNNNNNTAC 2 cut(s) 654, 686
BauI CACGAG 1 cut(s) 7
BbsI GAAGAC 2 cut(s) 77, 149
Bbv12I GWGCWC 1 cut(s) 104
BbvI GCAGC 1 cut(s) 460
BccI CCATC 1 cut(s) 706
BceAI ACGGC 1 cut(s) 162
BciVI GTATCC 1 cut(s) 773
BcoDI GTCTC 4 cut(s) 323, 378, 505, 689
BfaI CTAG 1 cut(s) 432
BfmI CTRYAG 1 cut(s) 825
BfrI CTTAAG 1 cut(s) 506
BfuI GTATCC 1 cut(s) 773
BisI GCNGC 3 cut(s) 39, 42, 474
BlsI GCNGC 3 cut(s) 40, 43, 475
Bme18I GGWCC 3 cut(s) 136, 178, 457
BmeRI GACNNNNNGTC 1 cut(s) 219
BmgT120I GGNCC 3 cut(s) 136, 178, 457
BmsI GCATC 1 cut(s) 460
BpiI GAAGAC 2 cut(s) 77, 149
BpuEI CTTGAG 1 cut(s) 353
BsaJI CCNNGG 1 cut(s) 65
BsaWI WCCGGW 2 cut(s) 96, 159
Bsc4I CCNNNNNNNGG 3 cut(s) 145, 466, 606
Bse21I CCTNAGG 1 cut(s) 461
BseAI TCCGGA 1 cut(s) 96
BseDI CCNNGG 1 cut(s) 65
BseGI GGATG 2 cut(s) 475, 664
BseLI CCNNNNNNNGG 3 cut(s) 145, 466, 606
BseMII CTCAG 4 cut(s) 121, 271, 389, 452
BseSI GKGCMC 1 cut(s) 209
BseXI GCAGC 1 cut(s) 460
BshFI GGCC 3 cut(s) 5, 553, 610
BsiHKAI GWGCWC 1 cut(s) 104
BsiSI CCGG 2 cut(s) 97, 160
BslFI GGGAC 1 cut(s) 364
BslI CCNNNNNNNGG 3 cut(s) 145, 466, 606
BsmAI GTCTC 4 cut(s) 323, 378, 505, 689
BsmBI CGTCTC 1 cut(s) 323
BsmFI GGGAC 1 cut(s) 364
BsnI GGCC 3 cut(s) 5, 553, 610
Bsp1286I GDGCHC 2 cut(s) 104, 209
Bsp13I TCCGGA 1 cut(s) 96
Bsp143I GATC 5 cut(s) 279, 532, 556, 592, 753
BspACI CCGC 5 cut(s) 18, 39, 42, 84, 126
BspANI GGCC 3 cut(s) 5, 553, 610
BspCNI CTCAG 4 cut(s) 120, 270, 388, 453
BspEI TCCGGA 1 cut(s) 96
BspPI GGATC 2 cut(s) 287, 587
BspQI GCTCTTC 1 cut(s) 648
BspTI CTTAAG 1 cut(s) 506
BssECI CCNNGG 1 cut(s) 65
BssMI GATC 5 cut(s) 279, 532, 556, 592, 753
BssSI CACGAG 1 cut(s) 7
Bst2BI CACGAG 1 cut(s) 7
Bst4CI ACNGT 1 cut(s) 779
Bst6I CTCTTC 1 cut(s) 648
BstAFI CTTAAG 1 cut(s) 506
BstC8I GCNNGC 2 cut(s) 361, 365
BstDEI CTNAG 4 cut(s) 107, 257, 375, 461
BstF5I GGATG 2 cut(s) 475, 664
BstHHI GCGC 1 cut(s) 14
BstKTI GATC 5 cut(s) 282, 535, 559, 595, 756
BstMAI GTCTC 4 cut(s) 323, 378, 505, 689
BstMBI GATC 5 cut(s) 279, 532, 556, 592, 753
BstMWI GCNNNNNNNGC 2 cut(s) 11, 99
BstSFI CTRYAG 1 cut(s) 825
BstSLI GKGCMC 1 cut(s) 209
BstV1I GCAGC 1 cut(s) 460
BstV2I GAAGAC 2 cut(s) 77, 149
Bsu36I CCTNAGG 1 cut(s) 461
BsuI GTATCC 1 cut(s) 773
BsuRI GGCC 3 cut(s) 5, 553, 610
BtsCI GGATG 2 cut(s) 475, 664
Cac8I GCNNGC 2 cut(s) 361, 365
CfoI GCGC 1 cut(s) 14
Cfr13I GGNCC 3 cut(s) 136, 178, 457
CseI GACGC 1 cut(s) 340
Csp6I GTAC 3 cut(s) 157, 671, 722
CviQI GTAC 3 cut(s) 157, 671, 722
DdeI CTNAG 4 cut(s) 107, 257, 375, 461
DpnI GATC 5 cut(s) 281, 534, 558, 594, 755
DpnII GATC 5 cut(s) 279, 532, 556, 592, 753
DriI GACNNNNNGTC 1 cut(s) 219
EaeI YGGCCR 1 cut(s) 551
Eam1104I CTCTTC 1 cut(s) 648
Eam1105I GACNNNNNGTC 1 cut(s) 219
EarI CTCTTC 1 cut(s) 648
Ecl136II GAGCTC 1 cut(s) 102
Eco24I GRGCYC 1 cut(s) 104
Eco47I GGWCC 3 cut(s) 136, 178, 457
Eco53kI GAGCTC 1 cut(s) 102
Eco57I CTGAAG 1 cut(s) 656
Eco81I CCTNAGG 1 cut(s) 461
EcoICRI GAGCTC 1 cut(s) 102
EcoO109I RGGNCCY 1 cut(s) 457
EcoT38I GRGCYC 1 cut(s) 104
Esp3I CGTCTC 1 cut(s) 323
FaqI GGGAC 1 cut(s) 364
Fnu4HI GCNGC 3 cut(s) 39, 42, 474
FokI GGATG 2 cut(s) 482, 671
FriOI GRGCYC 1 cut(s) 104
Fsp4HI GCNGC 3 cut(s) 39, 42, 474
FspBI CTAG 1 cut(s) 432
GlaI GCGC 1 cut(s) 13
GluI GCNGC 3 cut(s) 39, 42, 474
HaeIII GGCC 3 cut(s) 5, 553, 610
HapII CCGG 2 cut(s) 97, 160
HgaI GACGC 1 cut(s) 340
HhaI GCGC 1 cut(s) 14
Hin6I GCGC 1 cut(s) 12
HinP1I GCGC 1 cut(s) 12
HindIII AAGCTT 1 cut(s) 303
HinfI GANTC 4 cut(s) 173, 313, 513, 821
HpaII CCGG 2 cut(s) 97, 160
HphI GGTGA 2 cut(s) 45, 590
Hpy188I TCNGA 7 cut(s) 69, 110, 178, 301, 318, 424, 820
Hpy188III TCNNGA 4 cut(s) 97, 248, 460, 647
HpyAV CCTTC 6 cut(s) 31, 319, 606, 631, 656, 734
HpyCH4III ACNGT 1 cut(s) 779
HpyCH4IV ACGT 2 cut(s) 215, 673
HpyCH4V TGCA 5 cut(s) 30, 154, 452, 476, 541
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 99
HpyF3I CTNAG 4 cut(s) 107, 257, 375, 461
HpySE526I ACGT 2 cut(s) 215, 673
HspAI GCGC 1 cut(s) 12
Kpn2I TCCGGA 1 cut(s) 96
Kzo9I GATC 5 cut(s) 279, 532, 556, 592, 753
LguI GCTCTTC 1 cut(s) 648
LmnI GCTCC 2 cut(s) 99, 628
Lsp1109I GCAGC 1 cut(s) 460
LweI GCATC 1 cut(s) 460
MaeI CTAG 1 cut(s) 432
MaeII ACGT 2 cut(s) 215, 673
MaeIII GTNAC 1 cut(s) 443
MalI GATC 5 cut(s) 281, 534, 558, 594, 755
MboI GATC 5 cut(s) 279, 532, 556, 592, 753
MboII GAAGA 5 cut(s) 82, 154, 334, 400, 635
MhlI GDGCHC 2 cut(s) 104, 209
MlsI TGGCCA 1 cut(s) 553
MluCI AATT 5 cut(s) 186, 252, 543, 772, 836
MluNI TGGCCA 1 cut(s) 553
MlyI GAGTC 2 cut(s) 167, 507
Mox20I TGGCCA 1 cut(s) 553
MroI TCCGGA 1 cut(s) 96
MscI TGGCCA 1 cut(s) 553
MseI TTAA 3 cut(s) 47, 507, 862
Msp20I TGGCCA 1 cut(s) 553
MspA1I CMGCKG 1 cut(s) 363
MspCI CTTAAG 1 cut(s) 506
MspI CCGG 2 cut(s) 97, 160
MwoI GCNNNNNNNGC 2 cut(s) 11, 99
NdeII GATC 5 cut(s) 279, 532, 556, 592, 753
NmeAIII GCCGAG 2 cut(s) 147, 495
NmuCI GTSAC 1 cut(s) 443
PciSI GCTCTTC 1 cut(s) 648
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PfeI GAWTC 2 cut(s) 313, 821
PkrI GCNGC 3 cut(s) 40, 43, 475
PleI GAGTC 2 cut(s) 167, 507
PpsI GAGTC 2 cut(s) 167, 507
PpuMI RGGWCCY 1 cut(s) 457
Psp124BI GAGCTC 1 cut(s) 104
Psp5II RGGWCCY 1 cut(s) 457
PspPI GGNCC 3 cut(s) 136, 178, 457
PspPPI RGGWCCY 1 cut(s) 457
PvuII CAGCTG 1 cut(s) 363
RsaI GTAC 3 cut(s) 158, 672, 723
RsaNI GTAC 3 cut(s) 157, 671, 722
SacI GAGCTC 1 cut(s) 104
SapI GCTCTTC 1 cut(s) 648
SaqAI TTAA 3 cut(s) 47, 507, 862
SatI GCNGC 3 cut(s) 39, 42, 474
Sau3AI GATC 5 cut(s) 279, 532, 556, 592, 753
Sau96I GGNCC 3 cut(s) 136, 178, 457
SchI GAGTC 2 cut(s) 167, 507
SduI GDGCHC 2 cut(s) 104, 209
SfaNI GCATC 1 cut(s) 460
SfcI CTRYAG 1 cut(s) 825
SinI GGWCC 3 cut(s) 136, 178, 457
SmlI CTYRAG 2 cut(s) 368, 506
SmoI CTYRAG 2 cut(s) 368, 506
Sse9I AATT 5 cut(s) 186, 252, 543, 772, 836
SsiI CCGC 5 cut(s) 18, 39, 42, 84, 126
SspI AATATT 1 cut(s) 481
SspMI CTAG 1 cut(s) 432
SstI GAGCTC 1 cut(s) 104
TaaI ACNGT 1 cut(s) 779
TaiI ACGT 2 cut(s) 218, 676
TaqI TCGA 3 cut(s) 183, 270, 738
TaqII GACCGA 2 cut(s) 209, 359
TasI AATT 5 cut(s) 186, 252, 543, 772, 836
TauI GCSGC 2 cut(s) 41, 44
TfiI GAWTC 2 cut(s) 313, 821
Tru1I TTAA 3 cut(s) 47, 507, 862
Tru9I TTAA 3 cut(s) 47, 507, 862
TseFI GTSAC 1 cut(s) 443
TseI GCWGC 1 cut(s) 473
Tsp45I GTSAC 1 cut(s) 443
TspDTI ATGAA 4 cut(s) 335, 536, 675, 690
TspGWI ACGGA 1 cut(s) 720
Vha464I CTTAAG 1 cut(s) 506
VpaK11BI GGWCC 3 cut(s) 136, 178, 457
XapI RAATTY 3 cut(s) 252, 543, 836
XspI CTAG 1 cut(s) 432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.