ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0396731 |
| rosa_roxburghii | Rroxscaffold_3G00239480 |
| rosa_rugosa | Rorug01G0260500 Rorug04G0356400 Rorug05G0382300 Rorug07G0227200 |
| rosa_samantha | Rh2AG227000 Rh2AG341200 Rh2BG289100 Rh2DG234500 Rh2DG284300 Rh4BG374000 Rh4CG211000 Rh4CG387900 Rh5AG167300 Rh6AG410000 Rh6BG118300 Rh6BG323100 Rh6DG105000 Rh7AG256100 Rh7AG478300 Rh7CG272500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 177 |
| AgsI | TTSAA | 2 cut(s) | 110, 247 |
| AluBI | AGCT | 1 cut(s) | 118 |
| AluI | AGCT | 1 cut(s) | 118 |
| ApeKI | GCWGC | 1 cut(s) | 146 |
| AseI | ATTAAT | 1 cut(s) | 255 |
| BbvI | GCAGC | 1 cut(s) | 158 |
| BfaI | CTAG | 1 cut(s) | 328 |
| BisI | GCNGC | 1 cut(s) | 147 |
| BlsI | GCNGC | 1 cut(s) | 148 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BpuEI | CTTGAG | 1 cut(s) | 74 |
| Bse3DI | GCAATG | 3 cut(s) | 31, 141, 296 |
| BseMI | GCAATG | 3 cut(s) | 31, 141, 296 |
| BseRI | GAGGAG | 1 cut(s) | 188 |
| BseXI | GCAGC | 1 cut(s) | 158 |
| Bsp143I | GATC | 1 cut(s) | 98 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BsrDI | GCAATG | 3 cut(s) | 31, 141, 296 |
| BssMI | GATC | 1 cut(s) | 98 |
| Bst4CI | ACNGT | 1 cut(s) | 251 |
| BstC8I | GCNNGC | 1 cut(s) | 207 |
| BstDEI | CTNAG | 1 cut(s) | 277 |
| BstKTI | GATC | 1 cut(s) | 101 |
| BstMBI | GATC | 1 cut(s) | 98 |
| BstV1I | GCAGC | 1 cut(s) | 158 |
| Cac8I | GCNNGC | 1 cut(s) | 207 |
| CviJI | RGCY | 2 cut(s) | 7, 118 |
| CviKI_1 | RGCY | 2 cut(s) | 7, 118 |
| DdeI | CTNAG | 1 cut(s) | 277 |
| DpnI | GATC | 1 cut(s) | 100 |
| DpnII | GATC | 1 cut(s) | 98 |
| Eco57I | CTGAAG | 1 cut(s) | 177 |
| EcoT22I | ATGCAT | 1 cut(s) | 296 |
| FaiI | YATR | 6 cut(s) | 10, 12, 103, 232, 287, 296 |
| FauNDI | CATATG | 1 cut(s) | 10 |
| Fnu4HI | GCNGC | 1 cut(s) | 147 |
| Fsp4HI | GCNGC | 1 cut(s) | 147 |
| FspBI | CTAG | 1 cut(s) | 328 |
| GluI | GCNGC | 1 cut(s) | 147 |
| HincII | GTYRAC | 1 cut(s) | 201 |
| HindII | GTYRAC | 1 cut(s) | 201 |
| HinfI | GANTC | 1 cut(s) | 92 |
| HpaI | GTTAAC | 1 cut(s) | 201 |
| Hpy166II | GTNNAC | 1 cut(s) | 201 |
| Hpy188I | TCNGA | 2 cut(s) | 18, 196 |
| Hpy188III | TCNNGA | 2 cut(s) | 53, 96 |
| Hpy8I | GTNNAC | 1 cut(s) | 201 |
| HpyAV | CCTTC | 3 cut(s) | 57, 62, 325 |
| HpyCH4III | ACNGT | 1 cut(s) | 251 |
| HpyCH4V | TGCA | 3 cut(s) | 146, 289, 294 |
| HpyF3I | CTNAG | 1 cut(s) | 277 |
| KspAI | GTTAAC | 1 cut(s) | 201 |
| Kzo9I | GATC | 1 cut(s) | 98 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| LpnPI | CCDG | 2 cut(s) | 60, 197 |
| Lsp1109I | GCAGC | 1 cut(s) | 158 |
| MaeI | CTAG | 1 cut(s) | 328 |
| MalI | GATC | 1 cut(s) | 100 |
| MboI | GATC | 1 cut(s) | 98 |
| MboII | GAAGA | 2 cut(s) | 180, 183 |
| MluCI | AATT | 2 cut(s) | 220, 309 |
| MnlI | CCTC | 4 cut(s) | 49, 166, 208, 274 |
| Mph1103I | ATGCAT | 1 cut(s) | 296 |
| MseI | TTAA | 3 cut(s) | 200, 219, 255 |
| NdeI | CATATG | 1 cut(s) | 10 |
| NdeII | GATC | 1 cut(s) | 98 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NsiI | ATGCAT | 1 cut(s) | 296 |
| PfeI | GAWTC | 1 cut(s) | 92 |
| PkrI | GCNGC | 1 cut(s) | 148 |
| PshBI | ATTAAT | 1 cut(s) | 255 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| SaqAI | TTAA | 3 cut(s) | 200, 219, 255 |
| SatI | GCNGC | 1 cut(s) | 147 |
| Sau3AI | GATC | 1 cut(s) | 98 |
| SetI | ASST | 4 cut(s) | 73, 108, 120, 219 |
| SgeI | CNNG | 9 cut(s) | 65, 72, 87, 108, 119, 131, 193, 218, 224 |
| SmlI | CTYRAG | 1 cut(s) | 53 |
| SmoI | CTYRAG | 1 cut(s) | 53 |
| Sse9I | AATT | 2 cut(s) | 220, 309 |
| SspMI | CTAG | 1 cut(s) | 328 |
| TaaI | ACNGT | 1 cut(s) | 251 |
| TasI | AATT | 2 cut(s) | 220, 309 |
| TfiI | GAWTC | 1 cut(s) | 92 |
| Tru1I | TTAA | 3 cut(s) | 200, 219, 255 |
| Tru9I | TTAA | 3 cut(s) | 200, 219, 255 |
| TseI | GCWGC | 1 cut(s) | 146 |
| TspDTI | ATGAA | 3 cut(s) | 42, 81, 214 |
| VspI | ATTAAT | 1 cut(s) | 255 |
| XspI | CTAG | 1 cut(s) | 328 |
| Zsp2I | ATGCAT | 1 cut(s) | 296 |