The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0396731 |
| rosa_roxburghii | Rroxscaffold_3G00239480 |
| rosa_rugosa | Rorug01G0260500 Rorug04G0356400 Rorug05G0382300 Rorug07G0227200 |
| rosa_samantha | Rh2AG227000 Rh2AG341200 Rh2BG289100 Rh2DG234500 Rh2DG284300 Rh4BG374000 Rh4CG211000 Rh4CG387900 Rh5AG167300 Rh6AG410000 Rh6BG118300 Rh6BG323100 Rh6DG105000 Rh7AG256100 Rh7AG478300 Rh7CG272500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 104 |
| AciI | CCGC | 1 cut(s) | 11 |
| AcuI | CTGAAG | 1 cut(s) | 38 |
| Aor13HI | TCCGGA | 1 cut(s) | 104 |
| AoxI | GGCC | 1 cut(s) | 32 |
| AsuHPI | GGTGA | 1 cut(s) | 103 |
| AsuII | TTCGAA | 1 cut(s) | 62 |
| BmsI | GCATC | 1 cut(s) | 109 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 127, 159 |
| Bpu14I | TTCGAA | 1 cut(s) | 62 |
| BpuEI | CTTGAG | 1 cut(s) | 154 |
| BsaWI | WCCGGW | 1 cut(s) | 104 |
| BseAI | TCCGGA | 1 cut(s) | 104 |
| BseMII | CTCAG | 1 cut(s) | 137 |
| BseRI | GAGGAG | 1 cut(s) | 132 |
| BshFI | GGCC | 1 cut(s) | 34 |
| BsiSI | CCGG | 1 cut(s) | 105 |
| BslFI | GGGAC | 2 cut(s) | 37, 135 |
| BsmFI | GGGAC | 2 cut(s) | 37, 135 |
| BsnI | GGCC | 1 cut(s) | 34 |
| Bsp119I | TTCGAA | 1 cut(s) | 62 |
| Bsp13I | TCCGGA | 1 cut(s) | 104 |
| BspACI | CCGC | 1 cut(s) | 11 |
| BspANI | GGCC | 1 cut(s) | 34 |
| BspCNI | CTCAG | 1 cut(s) | 136 |
| BspEI | TCCGGA | 1 cut(s) | 104 |
| BspQI | GCTCTTC | 1 cut(s) | 95 |
| BspT104I | TTCGAA | 1 cut(s) | 62 |
| Bst4CI | ACNGT | 1 cut(s) | 49 |
| Bst6I | CTCTTC | 1 cut(s) | 95 |
| BstBI | TTCGAA | 1 cut(s) | 62 |
| BstDEI | CTNAG | 2 cut(s) | 123, 146 |
| BsuRI | GGCC | 1 cut(s) | 34 |
| CviJI | RGCY | 2 cut(s) | 34, 88 |
| CviKI_1 | RGCY | 2 cut(s) | 34, 88 |
| DdeI | CTNAG | 2 cut(s) | 123, 146 |
| Eam1104I | CTCTTC | 1 cut(s) | 95 |
| EarI | CTCTTC | 1 cut(s) | 95 |
| Eco57I | CTGAAG | 1 cut(s) | 38 |
| FaqI | GGGAC | 2 cut(s) | 37, 135 |
| HaeIII | GGCC | 1 cut(s) | 34 |
| HapII | CCGG | 1 cut(s) | 105 |
| HinfI | GANTC | 3 cut(s) | 75, 108, 127 |
| HpaII | CCGG | 1 cut(s) | 105 |
| HphI | GGTGA | 1 cut(s) | 103 |
| Hpy188I | TCNGA | 2 cut(s) | 45, 126 |
| Hpy188III | TCNNGA | 3 cut(s) | 105, 133, 152 |
| HpyAV | CCTTC | 2 cut(s) | 13, 24 |
| HpyCH4III | ACNGT | 1 cut(s) | 49 |
| HpyF3I | CTNAG | 2 cut(s) | 123, 146 |
| Kpn2I | TCCGGA | 1 cut(s) | 104 |
| LguI | GCTCTTC | 1 cut(s) | 95 |
| LpnPI | CCDG | 1 cut(s) | 118 |
| LweI | GCATC | 1 cut(s) | 109 |
| MboII | GAAGA | 4 cut(s) | 39, 76, 82, 167 |
| MluCI | AATT | 2 cut(s) | 58, 159 |
| MlyI | GAGTC | 3 cut(s) | 84, 102, 121 |
| MnlI | CCTC | 3 cut(s) | 104, 110, 153 |
| MroI | TCCGGA | 1 cut(s) | 104 |
| MseI | TTAA | 1 cut(s) | 57 |
| MspI | CCGG | 1 cut(s) | 105 |
| NspV | TTCGAA | 1 cut(s) | 62 |
| PciSI | GCTCTTC | 1 cut(s) | 95 |
| PflFI | GACNNNGTC | 1 cut(s) | 49 |
| PleI | GAGTC | 3 cut(s) | 83, 102, 121 |
| PpsI | GAGTC | 3 cut(s) | 83, 102, 121 |
| PsyI | GACNNNGTC | 1 cut(s) | 49 |
| SapI | GCTCTTC | 1 cut(s) | 95 |
| SaqAI | TTAA | 1 cut(s) | 57 |
| SchI | GAGTC | 3 cut(s) | 84, 102, 121 |
| SetI | ASST | 1 cut(s) | 172 |
| SfaNI | GCATC | 1 cut(s) | 109 |
| SfuI | TTCGAA | 1 cut(s) | 62 |
| SgeI | CNNG | 3 cut(s) | 117, 145, 164 |
| SmlI | CTYRAG | 1 cut(s) | 133 |
| SmoI | CTYRAG | 1 cut(s) | 133 |
| Sse9I | AATT | 2 cut(s) | 58, 159 |
| SsiI | CCGC | 1 cut(s) | 11 |
| TaaI | ACNGT | 1 cut(s) | 49 |
| TaqI | TCGA | 1 cut(s) | 62 |
| TasI | AATT | 2 cut(s) | 58, 159 |
| Tru1I | TTAA | 1 cut(s) | 57 |
| Tru9I | TTAA | 1 cut(s) | 57 |
| Tth111I | GACNNNGTC | 1 cut(s) | 49 |