ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0396731 |
| rosa_roxburghii | Rroxscaffold_3G00239480 |
| rosa_rugosa | Rorug01G0260500 Rorug04G0356400 Rorug05G0382300 Rorug07G0227200 |
| rosa_samantha | Rh2AG227000 Rh2AG341200 Rh2BG289100 Rh2DG234500 Rh2DG284300 Rh4BG374000 Rh4CG211000 Rh4CG387900 Rh5AG167300 Rh6AG410000 Rh6BG118300 Rh6BG323100 Rh6DG105000 Rh7AG256100 Rh7AG478300 Rh7CG272500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 314 |
| AccIII | TCCGGA | 1 cut(s) | 104 |
| AciI | CCGC | 1 cut(s) | 11 |
| AcuI | CTGAAG | 1 cut(s) | 38 |
| AgsI | TTSAA | 4 cut(s) | 63, 209, 227, 368 |
| AluBI | AGCT | 2 cut(s) | 235, 242 |
| AluI | AGCT | 2 cut(s) | 235, 242 |
| Aor13HI | TCCGGA | 1 cut(s) | 104 |
| AoxI | GGCC | 2 cut(s) | 32, 148 |
| AspS9I | GGNCC | 1 cut(s) | 272 |
| AsuHPI | GGTGA | 1 cut(s) | 103 |
| AvaII | GGWCC | 1 cut(s) | 272 |
| BbsI | GAAGAC | 1 cut(s) | 387 |
| Bme18I | GGWCC | 1 cut(s) | 272 |
| BmgT120I | GGNCC | 1 cut(s) | 272 |
| BmiI | GGNNCC | 1 cut(s) | 273 |
| BmsI | GCATC | 1 cut(s) | 109 |
| BpiI | GAAGAC | 1 cut(s) | 387 |
| BsaWI | WCCGGW | 1 cut(s) | 104 |
| Bse3DI | GCAATG | 1 cut(s) | 313 |
| BseAI | TCCGGA | 1 cut(s) | 104 |
| BseMI | GCAATG | 1 cut(s) | 313 |
| BseMII | CTCAG | 2 cut(s) | 137, 183 |
| BshFI | GGCC | 2 cut(s) | 34, 150 |
| BsiSI | CCGG | 1 cut(s) | 105 |
| BslFI | GGGAC | 2 cut(s) | 37, 285 |
| BsmFI | GGGAC | 2 cut(s) | 37, 285 |
| BsnI | GGCC | 2 cut(s) | 34, 150 |
| Bsp13I | TCCGGA | 1 cut(s) | 104 |
| BspACI | CCGC | 1 cut(s) | 11 |
| BspANI | GGCC | 2 cut(s) | 34, 150 |
| BspCNI | CTCAG | 2 cut(s) | 136, 184 |
| BspEI | TCCGGA | 1 cut(s) | 104 |
| BspLI | GGNNCC | 1 cut(s) | 273 |
| BspQI | GCTCTTC | 1 cut(s) | 95 |
| BsrDI | GCAATG | 1 cut(s) | 313 |
| Bst4CI | ACNGT | 1 cut(s) | 49 |
| Bst6I | CTCTTC | 1 cut(s) | 95 |
| BstDEI | CTNAG | 3 cut(s) | 123, 152, 192 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 317 |
| BstV2I | GAAGAC | 1 cut(s) | 387 |
| BsuRI | GGCC | 2 cut(s) | 34, 150 |
| Cfr13I | GGNCC | 1 cut(s) | 272 |
| CseI | GACGC | 1 cut(s) | 300 |
| CviAII | CATG | 2 cut(s) | 328, 341 |
| CviJI | RGCY | 5 cut(s) | 34, 88, 150, 235, 242 |
| CviKI_1 | RGCY | 5 cut(s) | 34, 88, 150, 235, 242 |
| DdeI | CTNAG | 3 cut(s) | 123, 152, 192 |
| Eam1104I | CTCTTC | 1 cut(s) | 95 |
| EarI | CTCTTC | 1 cut(s) | 95 |
| Eco47I | GGWCC | 1 cut(s) | 272 |
| Eco57I | CTGAAG | 1 cut(s) | 38 |
| EcoO109I | RGGNCCY | 1 cut(s) | 272 |
| FaeI | CATG | 2 cut(s) | 331, 344 |
| FaqI | GGGAC | 2 cut(s) | 37, 285 |
| FatI | CATG | 2 cut(s) | 327, 340 |
| FblI | GTMKAC | 1 cut(s) | 314 |
| HaeIII | GGCC | 2 cut(s) | 34, 150 |
| HapII | CCGG | 1 cut(s) | 105 |
| HgaI | GACGC | 1 cut(s) | 300 |
| Hin1II | CATG | 2 cut(s) | 331, 344 |
| HinfI | GANTC | 4 cut(s) | 75, 108, 127, 209 |
| HpaII | CCGG | 1 cut(s) | 105 |
| HphI | GGTGA | 1 cut(s) | 103 |
| Hpy166II | GTNNAC | 1 cut(s) | 315 |
| Hpy188I | TCNGA | 5 cut(s) | 45, 126, 138, 160, 193 |
| Hpy188III | TCNNGA | 1 cut(s) | 105 |
| Hpy8I | GTNNAC | 1 cut(s) | 315 |
| HpyAV | CCTTC | 4 cut(s) | 13, 24, 166, 179 |
| HpyCH4III | ACNGT | 1 cut(s) | 49 |
| HpyCH4V | TGCA | 1 cut(s) | 290 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 317 |
| HpyF3I | CTNAG | 3 cut(s) | 123, 152, 192 |
| Hsp92II | CATG | 2 cut(s) | 331, 344 |
| Kpn2I | TCCGGA | 1 cut(s) | 104 |
| LguI | GCTCTTC | 1 cut(s) | 95 |
| LpnPI | CCDG | 3 cut(s) | 118, 288, 300 |
| LweI | GCATC | 1 cut(s) | 109 |
| MboII | GAAGA | 3 cut(s) | 39, 82, 392 |
| MluCI | AATT | 1 cut(s) | 58 |
| MlyI | GAGTC | 3 cut(s) | 84, 102, 121 |
| MnlI | CCTC | 2 cut(s) | 104, 110 |
| MroI | TCCGGA | 1 cut(s) | 104 |
| MseI | TTAA | 3 cut(s) | 57, 323, 360 |
| MslI | CAYNNNNRTG | 2 cut(s) | 306, 345 |
| MspI | CCGG | 1 cut(s) | 105 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 317 |
| NlaIII | CATG | 2 cut(s) | 331, 344 |
| NlaIV | GGNNCC | 1 cut(s) | 273 |
| PciSI | GCTCTTC | 1 cut(s) | 95 |
| PfeI | GAWTC | 1 cut(s) | 209 |
| PflFI | GACNNNGTC | 1 cut(s) | 49 |
| PleI | GAGTC | 3 cut(s) | 83, 102, 121 |
| PpsI | GAGTC | 3 cut(s) | 83, 102, 121 |
| PpuMI | RGGWCCY | 1 cut(s) | 272 |
| Psp5II | RGGWCCY | 1 cut(s) | 272 |
| PspN4I | GGNNCC | 1 cut(s) | 273 |
| PspPI | GGNCC | 1 cut(s) | 272 |
| PspPPI | RGGWCCY | 1 cut(s) | 272 |
| PsyI | GACNNNGTC | 1 cut(s) | 49 |
| RseI | CAYNNNNRTG | 2 cut(s) | 306, 345 |
| SapI | GCTCTTC | 1 cut(s) | 95 |
| SaqAI | TTAA | 3 cut(s) | 57, 323, 360 |
| Sau96I | GGNCC | 1 cut(s) | 272 |
| SchI | GAGTC | 3 cut(s) | 84, 102, 121 |
| SetI | ASST | 5 cut(s) | 190, 225, 237, 244, 277 |
| SfaNI | GCATC | 1 cut(s) | 109 |
| SgeI | CNNG | 9 cut(s) | 117, 180, 189, 236, 258, 287, 299, 340, 353 |
| SinI | GGWCC | 1 cut(s) | 272 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 306, 345 |
| Sse9I | AATT | 1 cut(s) | 58 |
| SsiI | CCGC | 1 cut(s) | 11 |
| SspI | AATATT | 1 cut(s) | 164 |
| TaaI | ACNGT | 1 cut(s) | 49 |
| TasI | AATT | 1 cut(s) | 58 |
| TfiI | GAWTC | 1 cut(s) | 209 |
| Tru1I | TTAA | 3 cut(s) | 57, 323, 360 |
| Tru9I | TTAA | 3 cut(s) | 57, 323, 360 |
| TspDTI | ATGAA | 2 cut(s) | 198, 393 |
| TspGWI | ACGGA | 1 cut(s) | 184 |
| Tth111I | GACNNNGTC | 1 cut(s) | 49 |
| VpaK11BI | GGWCC | 1 cut(s) | 272 |
| XmiI | GTMKAC | 1 cut(s) | 314 |