ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0396731 |
| rosa_roxburghii | Rroxscaffold_3G00239480 |
| rosa_rugosa | Rorug01G0260500 Rorug04G0356400 Rorug05G0382300 Rorug07G0227200 |
| rosa_samantha | Rh2AG227000 Rh2AG341200 Rh2BG289100 Rh2DG234500 Rh2DG284300 Rh4BG374000 Rh4CG211000 Rh4CG387900 Rh5AG167300 Rh6AG410000 Rh6BG118300 Rh6BG323100 Rh6DG105000 Rh7AG256100 Rh7AG478300 Rh7CG272500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 182 |
| AclWI | GGATC | 1 cut(s) | 250 |
| AgsI | TTSAA | 3 cut(s) | 94, 236, 296 |
| AjiI | CACGTC | 1 cut(s) | 302 |
| AluBI | AGCT | 1 cut(s) | 110 |
| AluI | AGCT | 1 cut(s) | 110 |
| Alw26I | GTCTC | 1 cut(s) | 258 |
| AlwI | GGATC | 1 cut(s) | 250 |
| AseI | ATTAAT | 1 cut(s) | 102 |
| AspS9I | GGNCC | 1 cut(s) | 140 |
| AsuHPI | GGTGA | 1 cut(s) | 276 |
| AvaII | GGWCC | 1 cut(s) | 140 |
| BccI | CCATC | 1 cut(s) | 112 |
| BcoDI | GTCTC | 1 cut(s) | 258 |
| BfmI | CTRYAG | 1 cut(s) | 39 |
| Bme18I | GGWCC | 1 cut(s) | 140 |
| BmgBI | CACGTC | 1 cut(s) | 302 |
| BmgT120I | GGNCC | 1 cut(s) | 140 |
| BmiI | GGNNCC | 1 cut(s) | 141 |
| BoxI | GACNNNNGTC | 1 cut(s) | 270 |
| BsaI | GGTCTC | 1 cut(s) | 258 |
| Bse3DI | GCAATG | 1 cut(s) | 181 |
| BseGI | GGATG | 1 cut(s) | 123 |
| BseMI | GCAATG | 1 cut(s) | 181 |
| BseRI | GAGGAG | 1 cut(s) | 35 |
| BslFI | GGGAC | 1 cut(s) | 153 |
| BsmAI | GTCTC | 1 cut(s) | 258 |
| BsmFI | GGGAC | 1 cut(s) | 153 |
| Bso31I | GGTCTC | 1 cut(s) | 258 |
| Bsp143I | GATC | 1 cut(s) | 242 |
| BspLI | GGNNCC | 1 cut(s) | 141 |
| BspMAI | CTGCAG | 1 cut(s) | 43 |
| BspPI | GGATC | 1 cut(s) | 250 |
| BspTNI | GGTCTC | 1 cut(s) | 258 |
| BsrDI | GCAATG | 1 cut(s) | 181 |
| BssMI | GATC | 1 cut(s) | 242 |
| Bst4CI | ACNGT | 1 cut(s) | 98 |
| BstC8I | GCNNGC | 1 cut(s) | 54 |
| BstF5I | GGATG | 1 cut(s) | 123 |
| BstKTI | GATC | 1 cut(s) | 245 |
| BstMAI | GTCTC | 1 cut(s) | 258 |
| BstMBI | GATC | 1 cut(s) | 242 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 185 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 270 |
| BstSFI | CTRYAG | 1 cut(s) | 39 |
| BtrI | CACGTC | 1 cut(s) | 302 |
| BtsCI | GGATG | 1 cut(s) | 123 |
| Cac8I | GCNNGC | 1 cut(s) | 54 |
| Cfr13I | GGNCC | 1 cut(s) | 140 |
| CseI | GACGC | 1 cut(s) | 168 |
| CviAII | CATG | 2 cut(s) | 196, 209 |
| CviJI | RGCY | 2 cut(s) | 110, 251 |
| CviKI_1 | RGCY | 2 cut(s) | 110, 251 |
| DpnI | GATC | 1 cut(s) | 244 |
| DpnII | GATC | 1 cut(s) | 242 |
| Eco31I | GGTCTC | 1 cut(s) | 258 |
| Eco47I | GGWCC | 1 cut(s) | 140 |
| EcoO109I | RGGNCCY | 1 cut(s) | 140 |
| FaeI | CATG | 2 cut(s) | 199, 212 |
| FaqI | GGGAC | 1 cut(s) | 153 |
| FatI | CATG | 2 cut(s) | 195, 208 |
| FblI | GTMKAC | 1 cut(s) | 182 |
| FokI | GGATG | 1 cut(s) | 130 |
| HgaI | GACGC | 1 cut(s) | 168 |
| Hin1II | CATG | 2 cut(s) | 199, 212 |
| HincII | GTYRAC | 1 cut(s) | 48 |
| HindII | GTYRAC | 1 cut(s) | 48 |
| HinfI | GANTC | 1 cut(s) | 258 |
| HpaI | GTTAAC | 1 cut(s) | 48 |
| HphI | GGTGA | 1 cut(s) | 276 |
| Hpy166II | GTNNAC | 2 cut(s) | 48, 183 |
| Hpy188I | TCNGA | 1 cut(s) | 263 |
| Hpy188III | TCNNGA | 1 cut(s) | 275 |
| Hpy8I | GTNNAC | 2 cut(s) | 48, 183 |
| HpyAV | CCTTC | 1 cut(s) | 290 |
| HpyCH4III | ACNGT | 1 cut(s) | 98 |
| HpyCH4IV | ACGT | 1 cut(s) | 301 |
| HpyCH4V | TGCA | 2 cut(s) | 41, 158 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 185 |
| HpySE526I | ACGT | 1 cut(s) | 301 |
| Hsp92II | CATG | 2 cut(s) | 199, 212 |
| KspAI | GTTAAC | 1 cut(s) | 48 |
| Kzo9I | GATC | 1 cut(s) | 242 |
| LpnPI | CCDG | 3 cut(s) | 44, 156, 168 |
| MaeII | ACGT | 1 cut(s) | 301 |
| MaeIII | GTNAC | 1 cut(s) | 282 |
| MalI | GATC | 1 cut(s) | 244 |
| MboI | GATC | 1 cut(s) | 242 |
| MboII | GAAGA | 1 cut(s) | 27 |
| MnlI | CCTC | 1 cut(s) | 13 |
| MseI | TTAA | 4 cut(s) | 47, 102, 191, 228 |
| MslI | CAYNNNNRTG | 2 cut(s) | 174, 213 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 185 |
| NdeII | GATC | 1 cut(s) | 242 |
| NlaIII | CATG | 2 cut(s) | 199, 212 |
| NlaIV | GGNNCC | 1 cut(s) | 141 |
| NmuCI | GTSAC | 1 cut(s) | 282 |
| PfeI | GAWTC | 1 cut(s) | 258 |
| PpuMI | RGGWCCY | 1 cut(s) | 140 |
| PshAI | GACNNNNGTC | 1 cut(s) | 270 |
| PshBI | ATTAAT | 1 cut(s) | 102 |
| Psp5II | RGGWCCY | 1 cut(s) | 140 |
| PspN4I | GGNNCC | 1 cut(s) | 141 |
| PspPI | GGNCC | 1 cut(s) | 140 |
| PspPPI | RGGWCCY | 1 cut(s) | 140 |
| PstI | CTGCAG | 1 cut(s) | 43 |
| RseI | CAYNNNNRTG | 2 cut(s) | 174, 213 |
| SaqAI | TTAA | 4 cut(s) | 47, 102, 191, 228 |
| Sau3AI | GATC | 1 cut(s) | 242 |
| Sau96I | GGNCC | 1 cut(s) | 140 |
| SetI | ASST | 4 cut(s) | 112, 145, 289, 304 |
| SfcI | CTRYAG | 1 cut(s) | 39 |
| SinI | GGWCC | 1 cut(s) | 140 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 174, 213 |
| TaaI | ACNGT | 1 cut(s) | 98 |
| TaiI | ACGT | 1 cut(s) | 304 |
| TfiI | GAWTC | 1 cut(s) | 258 |
| Tru1I | TTAA | 4 cut(s) | 47, 102, 191, 228 |
| Tru9I | TTAA | 4 cut(s) | 47, 102, 191, 228 |
| TseFI | GTSAC | 1 cut(s) | 282 |
| Tsp45I | GTSAC | 1 cut(s) | 282 |
| TspDTI | ATGAA | 1 cut(s) | 61 |
| TspGWI | ACGGA | 1 cut(s) | 130 |
| VpaK11BI | GGWCC | 1 cut(s) | 140 |
| VspI | ATTAAT | 1 cut(s) | 102 |
| XmiI | GTMKAC | 1 cut(s) | 182 |