ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0396731 |
| rosa_roxburghii | Rroxscaffold_3G00239480 |
| rosa_rugosa | Rorug01G0260500 Rorug04G0356400 Rorug05G0382300 Rorug07G0227200 |
| rosa_samantha | Rh2AG227000 Rh2AG341200 Rh2BG289100 Rh2DG234500 Rh2DG284300 Rh4BG374000 Rh4CG211000 Rh4CG387900 Rh5AG167300 Rh6AG410000 Rh6BG118300 Rh6BG323100 Rh6DG105000 Rh7AG256100 Rh7AG478300 Rh7CG272500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 219 |
| AccI | GTMKAC | 1 cut(s) | 140 |
| AclWI | GGATC | 1 cut(s) | 193 |
| AcuI | CTGAAG | 1 cut(s) | 24 |
| AfaI | GTAC | 1 cut(s) | 26 |
| AgsI | TTSAA | 1 cut(s) | 194 |
| AluBI | AGCT | 2 cut(s) | 68, 224 |
| AluI | AGCT | 2 cut(s) | 68, 224 |
| AlwI | GGATC | 1 cut(s) | 193 |
| AspS9I | GGNCC | 1 cut(s) | 98 |
| AvaII | GGWCC | 1 cut(s) | 98 |
| BccI | CCATC | 2 cut(s) | 83, 246 |
| BmcAI | AGTACT | 1 cut(s) | 26 |
| Bme18I | GGWCC | 1 cut(s) | 98 |
| BmgT120I | GGNCC | 1 cut(s) | 98 |
| BmiI | GGNNCC | 1 cut(s) | 99 |
| Bse3DI | GCAATG | 1 cut(s) | 139 |
| BseGI | GGATG | 1 cut(s) | 94 |
| BseMI | GCAATG | 1 cut(s) | 139 |
| BseRI | GAGGAG | 1 cut(s) | 35 |
| BslFI | GGGAC | 1 cut(s) | 111 |
| BsmFI | GGGAC | 1 cut(s) | 111 |
| Bsp143I | GATC | 1 cut(s) | 198 |
| BspLI | GGNNCC | 1 cut(s) | 99 |
| BspPI | GGATC | 1 cut(s) | 193 |
| BsrDI | GCAATG | 1 cut(s) | 139 |
| BssMI | GATC | 1 cut(s) | 198 |
| BstC8I | GCNNGC | 1 cut(s) | 54 |
| BstF5I | GGATG | 1 cut(s) | 94 |
| BstKTI | GATC | 1 cut(s) | 201 |
| BstMBI | GATC | 1 cut(s) | 198 |
| BstX2I | RGATCY | 1 cut(s) | 198 |
| BstYI | RGATCY | 1 cut(s) | 198 |
| BtsCI | GGATG | 1 cut(s) | 94 |
| Cac8I | GCNNGC | 1 cut(s) | 54 |
| Cfr13I | GGNCC | 1 cut(s) | 98 |
| CseI | GACGC | 1 cut(s) | 126 |
| Csp6I | GTAC | 1 cut(s) | 25 |
| CviAII | CATG | 3 cut(s) | 154, 167, 203 |
| CviJI | RGCY | 2 cut(s) | 68, 224 |
| CviKI_1 | RGCY | 2 cut(s) | 68, 224 |
| CviQI | GTAC | 1 cut(s) | 25 |
| DpnI | GATC | 1 cut(s) | 200 |
| DpnII | GATC | 1 cut(s) | 198 |
| Eco47I | GGWCC | 1 cut(s) | 98 |
| Eco57I | CTGAAG | 1 cut(s) | 24 |
| EcoO109I | RGGNCCY | 1 cut(s) | 98 |
| FaeI | CATG | 3 cut(s) | 157, 170, 206 |
| FaiI | YATR | 8 cut(s) | 121, 155, 168, 174, 179, 204, 214, 219 |
| FaqI | GGGAC | 1 cut(s) | 111 |
| FatI | CATG | 3 cut(s) | 153, 166, 202 |
| FblI | GTMKAC | 1 cut(s) | 140 |
| FokI | GGATG | 1 cut(s) | 101 |
| HgaI | GACGC | 1 cut(s) | 126 |
| Hin1II | CATG | 3 cut(s) | 157, 170, 206 |
| HincII | GTYRAC | 1 cut(s) | 48 |
| HindII | GTYRAC | 1 cut(s) | 48 |
| HpaI | GTTAAC | 1 cut(s) | 48 |
| Hpy166II | GTNNAC | 2 cut(s) | 48, 141 |
| Hpy188I | TCNGA | 2 cut(s) | 17, 43 |
| Hpy188III | TCNNGA | 2 cut(s) | 86, 113 |
| Hpy8I | GTNNAC | 2 cut(s) | 48, 141 |
| Hsp92II | CATG | 3 cut(s) | 157, 170, 206 |
| KspAI | GTTAAC | 1 cut(s) | 48 |
| Kzo9I | GATC | 1 cut(s) | 198 |
| LmnI | GCTCC | 1 cut(s) | 240 |
| LpnPI | CCDG | 4 cut(s) | 44, 71, 114, 126 |
| MalI | GATC | 1 cut(s) | 200 |
| MboI | GATC | 1 cut(s) | 198 |
| MboII | GAAGA | 2 cut(s) | 27, 30 |
| MflI | RGATCY | 1 cut(s) | 198 |
| MnlI | CCTC | 1 cut(s) | 13 |
| MseI | TTAA | 3 cut(s) | 47, 149, 186 |
| MslI | CAYNNNNRTG | 3 cut(s) | 132, 171, 243 |
| NdeII | GATC | 1 cut(s) | 198 |
| NlaIII | CATG | 3 cut(s) | 157, 170, 206 |
| NlaIV | GGNNCC | 1 cut(s) | 99 |
| PpuMI | RGGWCCY | 1 cut(s) | 98 |
| PsiI | TTATAA | 1 cut(s) | 219 |
| Psp5II | RGGWCCY | 1 cut(s) | 98 |
| PspN4I | GGNNCC | 1 cut(s) | 99 |
| PspPI | GGNCC | 1 cut(s) | 98 |
| PspPPI | RGGWCCY | 1 cut(s) | 98 |
| PsuI | RGATCY | 1 cut(s) | 198 |
| RsaI | GTAC | 1 cut(s) | 26 |
| RsaNI | GTAC | 1 cut(s) | 25 |
| RseI | CAYNNNNRTG | 3 cut(s) | 132, 171, 243 |
| SaqAI | TTAA | 3 cut(s) | 47, 149, 186 |
| Sau3AI | GATC | 1 cut(s) | 198 |
| Sau96I | GGNCC | 1 cut(s) | 98 |
| ScaI | AGTACT | 1 cut(s) | 26 |
| SetI | ASST | 3 cut(s) | 70, 103, 226 |
| SinI | GGWCC | 1 cut(s) | 98 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 132, 171, 243 |
| TaqI | TCGA | 1 cut(s) | 241 |
| TatI | WGTACW | 1 cut(s) | 24 |
| Tru1I | TTAA | 3 cut(s) | 47, 149, 186 |
| Tru9I | TTAA | 3 cut(s) | 47, 149, 186 |
| VpaK11BI | GGWCC | 1 cut(s) | 98 |
| XmiI | GTMKAC | 1 cut(s) | 140 |
| ZrmI | AGTACT | 1 cut(s) | 26 |