RchiOBHm_Chr5g0005201

divergent subfamily of APPLE domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0008847
Physical Location & Seq
Reverse (-)
3361283 .. 3364809
3527 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28643

Sequence Viewer

Length: 2331 bp
ATGTATACTTTGAGGGCAAACCAGGTCTTTACAACTGGTCAGACATTGGTATCTTCAGGCCAAAGGTTTGAGCTTGGGTTCTTCAACCCAGGAACCTCAAAAAATAGCTTCTTGGGTGTTTGGTACAAGAATATTCTCCCTCTCACTGTGGTTTGGGTGGCCAACAGAAACAACCCTATTATTCCTGGTTCTTCTCCAGCAAGTTTATCTCTAGGCCCTTCGGGGTTTTCGATTTCCACTAATGAGTCTTTGATTGTGTGGTCTGTGAATGTCTCTGTGGTCTTAAATAGTCCCATATTGCAGCTCTTGGACAATGGCAATCTGATCTTGAGAGATGAAAGCGCTGCAGATGCAGAGGGGTATGTGATTTGGCAGAGTTTTGATTACATAACAGATACTTTGTTGCCGGAAATGAAGCTTGGCTGGAATTTGGTCACAGGTTTAAACCGGAATATGACATCATGGGTGTCCTCCAGTGACCCCTCTACCGGAGAATTTACTTTCAGTGTGGACCGGCCTGATCAAGCACCTCAGTTGGTGGTTAGGAAAGGGTCTGAGAAGCTAAATAGATGGGGGCCTTGGGATGGAGTCAGATTCAGTGGTAGCGAGGAGCTTCAGCCCAATCCGGTATGGACTCCAATTTTCAATATAAGCAGTGAAGAGGTCTATTACACATTTCAAGATATAGACAAATCTACTTTAACAAGGTTTGTGATGAACCAAGATGGCTCGGCTGAATATTTTACTTGGAGAGCAAGTAACAATCAGTGGGGTGGGGTGGTGACACTTAAACAGAGCAGTTGTGATGGGTATGGGATTTGTGGTCCTTATGGAAGTTGTGACTCCAAAGGTCCTAGTTGCGAGTGTTTGAAAGGATTTGCTCCCAAGTCACCACAGGAATGGCAGATACTCACTTGGACTGGAGGCTGTGTGAGAAGATGGGACTTGGATTGTAAGAATGCAGATGGATTTGTTAGATACAAGGGATTGAAGTTGCCGGATAACTCATTCCTGTTTGCAAACAGGAGTTTGAGCCTCAAGGAATGTGAGGCAGAGTGTTTGAAGAACTGTTCTTGTATGGCTTATACTAGGATTGATGTTCTTGCAAGAGGGGGAGACTGTGTTATGTGGTTTGATGAATTGGTTGATATGAGAAACTATCCGGATGAAGGGGACGAGATTTATATTCGAATGGCAAGAAAAGAACTAGGTATATGTGAGCTGTTGCTACACCCTTCATATCAAATTGCTTTTGTTTATGCAAGTTCTGAAAGCAGAGAAAATCCATATCAAGTACACAGGGAAGAAATGCAGGAAGAGGACCTCGAGTTACCTATCTGGGATTTTGATACTATTTCGACTGCTACTGAGGAGTTCTCTATAGCAAATAAAATTGGAGAGGGTGGCTTTGGTAGTGTATACAAGGGTGTATTACCTTCTGGGCAAGAAATTGCAGTGAAGAGACTGTCAGTGCATTCTGGACAGGGCCTCCAAGAATTCAAGAATGAGGTTGTCTTGATTGCAAAGCTTCAACACCGGAATCTTGTGAAGCTCTTGGGATGCTGTATTGAAAGAGAAGAAAAAATGCTAATTTACGAGTACCTTCCCAACAAGAGCTTGGACCGATTCCTATTTGATAGAAGACGAAAAGAAGTATTGACTTGGAGGAAACGTTTTGACATTGTTATGGGAATTGCGCGAGGACTACTGTATCTTCATCAAGACTCCAGGCTGAGAATTATCCATAGAGATCTCAAAGCAAGCAACATTTTACTAGACAGTGAGATGAAGTCGAAGATTTCTGACTTTGGAACAGCAAGAATTTTTGGGGGAGAACAAACAGAACAAATGACCAGGAGAGTGATTGGAACATATGGTTATATGTCTCCGGAATATGCTATGAGTGGACACTTCTCTGTGAAATCAGATGTATTCAGCTTCGGTGTGTTGGTCTTGGAGATAATAAGTGGCAGAAAGAATTCAGGATTTCATCACCCTGAGCATGACCTCAATCTTCTAGGACATGCATGGAATCTGTGGAATGAAGGAAATCCATTGCAACTGCTGGACGCCCATATAGAGAAATCTTCTTCTGTCAATGAAGTGACAAGATGTATTCAAGTAGCCCTTCTGTGTGTGCAGCAACGGATGGATGATAGACCGACTATGACAACTGTTTTATTAATGTTGTCTAATGAGAATTATTTGATGCCTCAACCGAAAGAACCTGGTTTTATTACTGAACTTCTTCCCATGGGAGATACATCATCAAGTGGAAAGTATCTTCATACTGCTAATGATTTAACTGTCACAATTCAAGATGGACGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

776

Amino Acids

87.69

Weight (kDa)

5.42

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 49 - 155 6.3e-28 D-mannose binding lectin
S_locus_glycop PF00954 190 - 297 1.7e-26 S-locus glycoprotein domain
PAN_2 PF08276 318 - 384 6.7e-18 PAN-like domain
Pkinase PF00069 460 - 727 1.6e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 461 - 727 2.8e-48 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 732 - 776 1.3e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 5, 1419
AccII CGCG 1 cut(s) 1699
AccIII TCCGGA 2 cut(s) 1162, 1888
AclI AACGTT 1 cut(s) 1672
AcoI YGGCCR 1 cut(s) 159
AcsI RAATTY 5 cut(s) 427, 494, 1496, 1821, 1978
AcuI CTGAAG 2 cut(s) 39, 599
AcyI GRCGYC 1 cut(s) 2070
AfaI GTAC 3 cut(s) 125, 1296, 1601
AfeI AGCGCT 1 cut(s) 343
AfiI CCNNNNNNNGG 3 cut(s) 488, 584, 1169
AjnI CCWGG 6 cut(s) 21, 88, 184, 1727, 1853, 2227
AjuI GAANNNNNNNTTGG 2 cut(s) 402, 434
Alw26I GTCTC 4 cut(s) 277, 1110, 1456, 1890
Ama87I CYCGRG 1 cut(s) 1325
Aor13HI TCCGGA 2 cut(s) 1162, 1888
Aor51HI AGCGCT 1 cut(s) 343
AoxI GGCC 6 cut(s) 58, 159, 214, 515, 575, 1486
ApeKI GCWGC 3 cut(s) 301, 344, 2140
ApoI RAATTY 5 cut(s) 427, 494, 1496, 1821, 1978
AseI ATTAAT 1 cut(s) 2183
Asp700I GAANNNNTTC 2 cut(s) 1978, 2247
AspLEI GCGC 2 cut(s) 344, 1699
AspS9I GGNCC 8 cut(s) 215, 511, 575, 824, 851, 1321, 1486, 1621
AsuHPI GGTGA 3 cut(s) 793, 882, 1985
AsuII TTCGAA 1 cut(s) 1189
AvaI CYCGRG 1 cut(s) 1325
AvaII GGWCC 5 cut(s) 511, 824, 851, 1321, 1621
BaeI ACNNNNGTAYC 4 cut(s) 33, 66, 1694, 1727
BalI TGGCCA 1 cut(s) 161
BbsI GAAGAC 1 cut(s) 1648
BbvI GCAGC 3 cut(s) 313, 331, 2152
BccI CCATC 8 cut(s) 564, 578, 719, 800, 933, 959, 2143, 2315
BciT130I CCWGG 6 cut(s) 23, 90, 186, 1729, 1855, 2229
BclI TGATCA 1 cut(s) 520
BcoDI GTCTC 4 cut(s) 277, 1110, 1456, 1890
BfaI CTAG 6 cut(s) 212, 855, 1089, 1208, 1775, 2018
BfmI CTRYAG 2 cut(s) 345, 1380
BfoI RGCGCY 1 cut(s) 345
BglII AGATCT 1 cut(s) 1750
BisI GCNGC 3 cut(s) 302, 345, 2141
BlsI GCNGC 3 cut(s) 303, 346, 2142
Bme1390I CCNGG 6 cut(s) 23, 90, 186, 1729, 1855, 2229
Bme18I GGWCC 5 cut(s) 511, 824, 851, 1321, 1621
BmeT110I CYCGRG 1 cut(s) 1325
BmgT120I GGNCC 8 cut(s) 215, 511, 575, 824, 851, 1321, 1486, 1621
BmiI GGNNCC 2 cut(s) 94, 576
BmrFI CCNGG 6 cut(s) 23, 90, 186, 1729, 1855, 2229
BmsI GCATC 3 cut(s) 340, 1550, 2199
BpiI GAAGAC 1 cut(s) 1648
BplI GAGNNNNNCTC 2 cut(s) 1361, 1393
BpmI CTGGAG 4 cut(s) 180, 457, 942, 1711
Bpu10I CCTNAGC 1 cut(s) 1998
Bpu14I TTCGAA 1 cut(s) 1189
BpuEI CTTGAG 2 cut(s) 349, 1022
BsaHI GRCGYC 1 cut(s) 2070
BsaJI CCNNGG 3 cut(s) 88, 578, 2253
BsaWI WCCGGW 6 cut(s) 447, 488, 625, 1162, 1536, 1888
Bsc4I CCNNNNNNNGG 3 cut(s) 488, 584, 1169
Bse118I RCCGGY 1 cut(s) 513
Bse1I ACTGG 3 cut(s) 40, 474, 925
Bse3DI GCAATG 1 cut(s) 2054
BseAI TCCGGA 2 cut(s) 1162, 1888
BseBI CCWGG 6 cut(s) 23, 90, 186, 1729, 1855, 2229
BseDI CCNNGG 3 cut(s) 88, 578, 2253
BseGI GGATG 5 cut(s) 589, 1171, 1565, 2154, 2158
BseLI CCNNNNNNNGG 3 cut(s) 488, 584, 1169
BseMI GCAATG 1 cut(s) 2054
BseMII CTCAG 5 cut(s) 545, 546, 1359, 1724, 1989
BseNI ACTGG 3 cut(s) 40, 474, 925
BseRI GAGGAG 2 cut(s) 623, 1385
BseXI GCAGC 3 cut(s) 313, 331, 2152
BsgI GTGCAG 1 cut(s) 2159
Bsh1236I CGCG 1 cut(s) 1699
BshFI GGCC 6 cut(s) 60, 161, 216, 517, 577, 1488
BsiHKCI CYCGRG 1 cut(s) 1325
BsiSI CCGG 9 cut(s) 407, 448, 489, 514, 626, 998, 1163, 1537, 1889
BslFI GGGAC 3 cut(s) 276, 956, 1187
BslI CCNNNNNNNGG 3 cut(s) 488, 584, 1169
BsmAI GTCTC 4 cut(s) 277, 1110, 1456, 1890
BsmFI GGGAC 3 cut(s) 276, 956, 1187
BsmI GAATGC 2 cut(s) 964, 1474
BsnI GGCC 6 cut(s) 60, 161, 216, 517, 577, 1488
BsoBI CYCGRG 1 cut(s) 1325
Bsp119I TTCGAA 1 cut(s) 1189
Bsp13I TCCGGA 2 cut(s) 1162, 1888
Bsp143I GATC 3 cut(s) 324, 520, 1750
Bsp19I CCATGG 1 cut(s) 2253
BspANI GGCC 6 cut(s) 60, 161, 216, 517, 577, 1488
BspCNI CTCAG 5 cut(s) 544, 547, 1360, 1725, 1990
BspEI TCCGGA 2 cut(s) 1162, 1888
BspFNI CGCG 1 cut(s) 1699
BspLI GGNNCC 2 cut(s) 94, 576
BspMAI CTGCAG 1 cut(s) 349
BspT104I TTCGAA 1 cut(s) 1189
BsrDI GCAATG 1 cut(s) 2054
BsrFI RCCGGY 1 cut(s) 513
BsrI ACTGG 3 cut(s) 40, 474, 925
BssAI RCCGGY 1 cut(s) 513
BssECI CCNNGG 3 cut(s) 88, 578, 2253
BssMI GATC 3 cut(s) 324, 520, 1750
BssNAI GTATAC 2 cut(s) 6, 1420
BssNI GRCGYC 1 cut(s) 2070
BssT1I CCWWGG 2 cut(s) 578, 2253
Bst1107I GTATAC 2 cut(s) 6, 1420
Bst2UI CCWGG 6 cut(s) 23, 90, 186, 1729, 1855, 2229
Bst4CI ACNGT 9 cut(s) 148, 1070, 1121, 1467, 1710, 1781, 2176, 2308, 2328
Bst6I CTCTTC 3 cut(s) 654, 1311, 1454
BstACI GRCGYC 1 cut(s) 2070
BstBI TTCGAA 1 cut(s) 1189
BstC8I GCNNGC 1 cut(s) 1762
BstDEI CTNAG 5 cut(s) 531, 555, 1368, 1733, 1998
BstDSI CCRYGG 1 cut(s) 2253
BstF5I GGATG 5 cut(s) 589, 1171, 1565, 2154, 2158
BstFNI CGCG 1 cut(s) 1699
BstH2I RGCGCY 1 cut(s) 345
BstHHI GCGC 2 cut(s) 344, 1699
BstKTI GATC 3 cut(s) 327, 523, 1753
BstMAI GTCTC 4 cut(s) 277, 1110, 1456, 1890
BstMBI GATC 3 cut(s) 324, 520, 1750
BstMWI GCNNNNNNNGC 1 cut(s) 350
BstNI CCWGG 6 cut(s) 23, 90, 186, 1729, 1855, 2229
BstNSI RCATGY 1 cut(s) 2027
BstSCI CCNGG 6 cut(s) 21, 88, 184, 1727, 1853, 2227
BstSFI CTRYAG 2 cut(s) 345, 1380
BstUI CGCG 1 cut(s) 1699
BstV1I GCAGC 3 cut(s) 313, 331, 2152
BstV2I GAAGAC 1 cut(s) 1648
BstX2I RGATCY 1 cut(s) 1750
BstXI CCANNNNNNTGG 1 cut(s) 900
BstYI RGATCY 1 cut(s) 1750
BstZ17I GTATAC 2 cut(s) 6, 1420
BsuRI GGCC 6 cut(s) 60, 161, 216, 517, 577, 1488
BtgI CCRYGG 1 cut(s) 2253
BtsCI GGATG 5 cut(s) 589, 1171, 1565, 2154, 2158
BtsI GCAGTG 2 cut(s) 661, 1461
BtsIMutI CAGTG 9 cut(s) 144, 481, 511, 604, 661, 773, 1461, 1476, 1786
Cac8I GCNNGC 1 cut(s) 1762
CfoI GCGC 2 cut(s) 344, 1699
Cfr10I RCCGGY 1 cut(s) 513
Cfr13I GGNCC 8 cut(s) 215, 511, 575, 824, 851, 1321, 1486, 1621
CseI GACGC 1 cut(s) 2078
CsiI ACCWGGT 2 cut(s) 21, 2227
Csp6I GTAC 3 cut(s) 124, 1295, 1600
CviAII CATG 5 cut(s) 462, 2003, 2024, 2028, 2254
CviQI GTAC 3 cut(s) 124, 1295, 1600
DdeI CTNAG 5 cut(s) 531, 555, 1368, 1733, 1998
DpnI GATC 3 cut(s) 326, 522, 1752
DpnII GATC 3 cut(s) 324, 520, 1750
DraI TTTAAA 1 cut(s) 444
EaeI YGGCCR 1 cut(s) 159
Eam1104I CTCTTC 3 cut(s) 654, 1311, 1454
EarI CTCTTC 3 cut(s) 654, 1311, 1454
Eco130I CCWWGG 2 cut(s) 578, 2253
Eco47I GGWCC 5 cut(s) 511, 824, 851, 1321, 1621
Eco47III AGCGCT 1 cut(s) 343
Eco57I CTGAAG 2 cut(s) 39, 599
Eco88I CYCGRG 1 cut(s) 1325
EcoO109I RGGNCCY 5 cut(s) 215, 575, 851, 1321, 1486
EcoRI GAATTC 2 cut(s) 1496, 1978
EcoRII CCWGG 6 cut(s) 21, 88, 184, 1727, 1853, 2227
EcoT14I CCWWGG 2 cut(s) 578, 2253
EcoT22I ATGCAT 1 cut(s) 2029
ErhI CCWWGG 2 cut(s) 578, 2253
FaeI CATG 5 cut(s) 465, 2006, 2027, 2031, 2257
FalI AAGNNNNNCTT 2 cut(s) 2112, 2144
FaqI GGGAC 3 cut(s) 276, 956, 1187
FatI CATG 5 cut(s) 461, 2002, 2023, 2027, 2253
FauNDI CATATG 1 cut(s) 1873
FbaI TGATCA 1 cut(s) 520
FblI GTMKAC 2 cut(s) 5, 1419
Fnu4HI GCNGC 3 cut(s) 302, 345, 2141
FokI GGATG 5 cut(s) 596, 1178, 1572, 2161, 2165
Fsp4HI GCNGC 3 cut(s) 302, 345, 2141
FspBI CTAG 6 cut(s) 212, 855, 1089, 1208, 1775, 2018
GlaI GCGC 2 cut(s) 343, 1698
GluI GCNGC 3 cut(s) 302, 345, 2141
GsuI CTGGAG 4 cut(s) 180, 457, 942, 1711
HaeII RGCGCY 1 cut(s) 345
HaeIII GGCC 6 cut(s) 60, 161, 216, 517, 577, 1488
HapII CCGG 9 cut(s) 407, 448, 489, 514, 626, 998, 1163, 1537, 1889
HgaI GACGC 1 cut(s) 2078
HhaI GCGC 2 cut(s) 344, 1699
Hin1I GRCGYC 1 cut(s) 2070
Hin1II CATG 5 cut(s) 465, 2006, 2027, 2031, 2257
Hin6I GCGC 2 cut(s) 342, 1697
HinP1I GCGC 2 cut(s) 342, 1697
HindIII AAGCTT 2 cut(s) 416, 1526
HinfI GANTC 9 cut(s) 245, 588, 594, 634, 842, 1540, 1626, 1724, 2032
HpaII CCGG 9 cut(s) 407, 448, 489, 514, 626, 998, 1163, 1537, 1889
HphI GGTGA 3 cut(s) 793, 882, 1985
Hpy166II GTNNAC 5 cut(s) 6, 511, 1297, 1420, 1907
Hpy188I TCNGA 7 cut(s) 42, 324, 556, 593, 1270, 1804, 1927
Hpy8I GTNNAC 5 cut(s) 6, 511, 1297, 1420, 1907
HpyAV CCTTC 7 cut(s) 228, 1163, 1245, 1446, 1613, 2039, 2138
HpyCH4III ACNGT 9 cut(s) 148, 1070, 1121, 1467, 1710, 1781, 2176, 2308, 2328
HpyCH4IV ACGT 1 cut(s) 1672
HpyF10VI GCNNNNNNNGC 1 cut(s) 350
HpyF3I CTNAG 5 cut(s) 531, 555, 1368, 1733, 1998
HpySE526I ACGT 1 cut(s) 1672
Hsp92I GRCGYC 1 cut(s) 2070
Hsp92II CATG 5 cut(s) 465, 2006, 2027, 2031, 2257
HspAI GCGC 2 cut(s) 342, 1697
Kpn2I TCCGGA 2 cut(s) 1162, 1888
Ksp22I TGATCA 1 cut(s) 520
Kzo9I GATC 3 cut(s) 324, 520, 1750
LmnI GCTCC 2 cut(s) 610, 886
Lsp1109I GCAGC 3 cut(s) 313, 331, 2152
LweI GCATC 3 cut(s) 340, 1550, 2199
MabI ACCWGGT 2 cut(s) 21, 2227
MaeI CTAG 6 cut(s) 212, 855, 1089, 1208, 1775, 2018
MaeII ACGT 1 cut(s) 1672
MaeIII GTNAC 9 cut(s) 433, 476, 758, 781, 839, 888, 1329, 2104, 2308
MalI GATC 3 cut(s) 326, 522, 1752
MboI GATC 3 cut(s) 324, 520, 1750
MflI RGATCY 1 cut(s) 1750
MlsI TGGCCA 1 cut(s) 161
MluNI TGGCCA 1 cut(s) 161
MlyI GAGTC 5 cut(s) 254, 597, 628, 836, 1718
Mox20I TGGCCA 1 cut(s) 161
Mph1103I ATGCAT 1 cut(s) 2029
MroI TCCGGA 2 cut(s) 1162, 1888
MroXI GAANNNNTTC 2 cut(s) 1978, 2247
MscI TGGCCA 1 cut(s) 161
MseI TTAA 6 cut(s) 284, 443, 701, 789, 2183, 2303
MslI CAYNNNNRTG 2 cut(s) 898, 1685
Msp20I TGGCCA 1 cut(s) 161
MspI CCGG 9 cut(s) 407, 448, 489, 514, 626, 998, 1163, 1537, 1889
MspR9I CCNGG 6 cut(s) 23, 90, 186, 1729, 1855, 2229
MssI GTTTAAAC 1 cut(s) 444
Mva1269I GAATGC 2 cut(s) 964, 1474
MvaI CCWGG 6 cut(s) 23, 90, 186, 1729, 1855, 2229
MvnI CGCG 1 cut(s) 1699
MwoI GCNNNNNNNGC 1 cut(s) 350
NcoI CCATGG 1 cut(s) 2253
NdeI CATATG 1 cut(s) 1873
NdeII GATC 3 cut(s) 324, 520, 1750
NlaIII CATG 5 cut(s) 465, 2006, 2027, 2031, 2257
NlaIV GGNNCC 2 cut(s) 94, 576
NmeAIII GCCGAG 1 cut(s) 710
NmuCI GTSAC 7 cut(s) 433, 476, 781, 839, 888, 2104, 2308
NsiI ATGCAT 1 cut(s) 2029
NspI RCATGY 1 cut(s) 2027
NspV TTCGAA 1 cut(s) 1189
PaeR7I CTCGAG 1 cut(s) 1325
PcsI WCGNNNNNNNCGW 1 cut(s) 227
PctI GAATGC 2 cut(s) 964, 1474
PdmI GAANNNNTTC 2 cut(s) 1978, 2247
PfeI GAWTC 4 cut(s) 594, 1540, 1626, 2032
PkrI GCNGC 3 cut(s) 303, 346, 2142
PleI GAGTC 5 cut(s) 253, 596, 628, 836, 1718
PmeI GTTTAAAC 1 cut(s) 444
PpsI GAGTC 5 cut(s) 253, 596, 628, 836, 1718
PpuMI RGGWCCY 2 cut(s) 851, 1321
PshBI ATTAAT 1 cut(s) 2183
Psp1406I AACGTT 1 cut(s) 1672
Psp5II RGGWCCY 2 cut(s) 851, 1321
Psp6I CCWGG 6 cut(s) 21, 88, 184, 1727, 1853, 2227
PspGI CCWGG 6 cut(s) 21, 88, 184, 1727, 1853, 2227
PspN4I GGNNCC 2 cut(s) 94, 576
PspPI GGNCC 8 cut(s) 215, 511, 575, 824, 851, 1321, 1486, 1621
PspPPI RGGWCCY 2 cut(s) 851, 1321
PspXI VCTCGAGB 1 cut(s) 1325
PstI CTGCAG 1 cut(s) 349
PsuI RGATCY 1 cut(s) 1750
RsaI GTAC 3 cut(s) 125, 1296, 1601
RsaNI GTAC 3 cut(s) 124, 1295, 1600
RseI CAYNNNNRTG 2 cut(s) 898, 1685
SaqAI TTAA 6 cut(s) 284, 443, 701, 789, 2183, 2303
SatI GCNGC 3 cut(s) 302, 345, 2141
Sau3AI GATC 3 cut(s) 324, 520, 1750
Sau96I GGNCC 8 cut(s) 215, 511, 575, 824, 851, 1321, 1486, 1621
SchI GAGTC 5 cut(s) 254, 597, 628, 836, 1718
ScrFI CCNGG 6 cut(s) 23, 90, 186, 1729, 1855, 2229
SexAI ACCWGGT 2 cut(s) 21, 2227
SfaNI GCATC 3 cut(s) 340, 1550, 2199
SfcI CTRYAG 2 cut(s) 345, 1380
Sfr274I CTCGAG 1 cut(s) 1325
SfuI TTCGAA 1 cut(s) 1189
SinI GGWCC 5 cut(s) 511, 824, 851, 1321, 1621
SlaI CTCGAG 1 cut(s) 1325
SmiMI CAYNNNNRTG 2 cut(s) 898, 1685
SmlI CTYRAG 3 cut(s) 328, 1037, 1325
SmoI CTYRAG 3 cut(s) 328, 1037, 1325
SspI AATATT 2 cut(s) 133, 740
SspMI CTAG 6 cut(s) 212, 855, 1089, 1208, 1775, 2018
StyD4I CCNGG 6 cut(s) 21, 88, 184, 1727, 1853, 2227
StyI CCWWGG 2 cut(s) 578, 2253
TaaI ACNGT 9 cut(s) 148, 1070, 1121, 1467, 1710, 1781, 2176, 2308, 2328
TaiI ACGT 1 cut(s) 1675
TaqI TCGA 5 cut(s) 230, 1189, 1326, 1358, 1793
TaqII GACCGA 2 cut(s) 1638, 2176
TatI WGTACW 1 cut(s) 1294
TfiI GAWTC 4 cut(s) 594, 1540, 1626, 2032
Tru1I TTAA 6 cut(s) 284, 443, 701, 789, 2183, 2303
Tru9I TTAA 6 cut(s) 284, 443, 701, 789, 2183, 2303
TscAI CASTG 9 cut(s) 151, 481, 511, 604, 661, 773, 1461, 1476, 1786
TseFI GTSAC 7 cut(s) 433, 476, 781, 839, 888, 2104, 2308
TseI GCWGC 3 cut(s) 301, 344, 2140
Tsp45I GTSAC 7 cut(s) 433, 476, 781, 839, 888, 2104, 2308
TspGWI ACGGA 1 cut(s) 2161
TspRI CASTG 9 cut(s) 151, 481, 511, 604, 661, 773, 1461, 1476, 1786
VpaK11BI GGWCC 5 cut(s) 511, 824, 851, 1321, 1621
VspI ATTAAT 1 cut(s) 2183
XapI RAATTY 5 cut(s) 427, 494, 1496, 1821, 1978
XceI RCATGY 1 cut(s) 2027
XcmI CCANNNNNNNNNTGG 1 cut(s) 1615
XhoI CTCGAG 1 cut(s) 1325
XmiI GTMKAC 2 cut(s) 5, 1419
XmnI GAANNNNTTC 2 cut(s) 1978, 2247
XspI CTAG 6 cut(s) 212, 855, 1089, 1208, 1775, 2018
Zsp2I ATGCAT 1 cut(s) 2029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.