Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004246

Physical Location & Seq

Genomic Coordinates Reverse (-)

44159326 .. 44164140

Gene Structure 4815 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ32551

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGGGGTTCCATCGTTTTTTCGTTGGTTGGTAAACAAGTACCCTAAAGTGGTTGTGAAAGCCATTGAAGTGGGAGAGGATCAGATTCTAGATGCAAGCTTGCCAAACCCAAATGGCATAGAGTTCGATAACCTATTTCTAGACATGAATGGGATTATCCATCCCTGCTTTCACCCGGAAGAAGATGATGATGATGGTTATGGACTTGCACCACCAAGAACTTATGAAGATGTCTTCAACAATATTTTCGAATACACTGATAGGCTTTTCAACGTTGTTAGACCAAGGAAACTACTCTACATAGCCATTGATGGAGTTGCTCCGAGGGCTAAAATGAATCAACAGCGTGCCAGGCGTTTTAAGTCGGCAATGGACAAGAATCTTGCAGTGGGTGAGGCTGAAGAAGAGAAACTAAGACAGCAATTTGAAAAGGAAGGGAAAAAAATCCTACCAGAACAGGAATCCGAAGTTTCTGATTCTAATATAATCACCCCTGGAACGGATTTCATGTACAAGTTATCCAAGGCTCTTCGAAGCTACATCAATCTACGTTTAAGCCAAGATTCAGGCTGGAGGGACATCAAGGTAATACTTTCTGATGCCAATGTTCCTGGGGAAGGAGAACATAAAGTGATGTCGTTCATACGTCACCAGCGAACTGTTCCTTCTTATGATCCAAACACCCGCCATTGCTTGTATGGTCTGGATGCGGATCTTATAATGTTGTCTTTGGCAACACATGAAGTTCACCTTTCCATACTAAGAGAGTTTCTGCATGTTTGGATTTTGAGGGAATATCTGGAGCTTGACATGCAAATCAATGATCCTCCTGAGAACTTTAAGTTTGATCTTGAGCGAATCATTGATGATTTCATCTTTATATGTTTCTTTGCGGGAAATGATTTTTTACCCCACATGCCAACATTGGAAATTCATGAGGGTGCAATTGATTTGCTGATGACAGTCTACAAGAAAGAATTCAAGAATATTGGTGGTTATTTGGTTGATATGATTCTGGTTCATGACAAGAAGTTGGGGTACATCAAACTATCTAGAGTTGAGAAATTTGTTCTCCTTATTGGAGCATTTGAAGAGAAAATATTCAAGAAAAGATCAGATATACGAGAACGTAAACTCAGACGTCTTTGCTATAACAATGATTCGATAGAGGAAGACATTGATGCTGGAAGTTCAAACTTTAATTTTGAGGCAATTGAAGGATCTGCAGTTGTTTCAGCGGATAATGTTTCATCTTCCGAAATAGTGGAAAACACAAAGGAATTCAAGCAAAAATTGAAGGCCAGCATTAGAAGAAAATCTGATCTGTTTAGGAATGGTGATTTTGGCACTGACAAAGTATGGAGCACTCCTTTCTGGAAGTTCCATTATCCTATATCATACTTCCTTCTGAACTTACATTCTGACTTATATATGTTTTCTCATTCATCCACACAGGTACGATTGGGTGCTACAGGATTCAAAGAAAGATATTACAAATGCAAATTTTCTGCTGACAGCCCGGGGGAGATTGAAAGCAAAAGGAAGGAAGTAGTTAAAAGCTACACAGAAGGACTGCTCTGGGTTCTTTTATACTACTTTTCCGGTCCCCCATCGTGGAAATGGTTTTATCCTTTTCATTATGGACCATTTGCCTCTAATATGAAGGGCCTAGCTCAGGTCAAACCACAATTCCAGAAAGGTGCCCCATTTAAACCTGTAGATACACTCATGGCAGTCCTGCCACCAAGAAGCGCTCATGCACTTCCTAAGGGTTATCGGACACTTATGATGGAAGAGTGTTCCACAATCATTGATTTTTACCCTTCTGACTTCGAAATTGACATGGATGGGAAGAGATTCACATGGCAGGGTATCTGCAAACTTCCCTTTATAGAAGAATCCCGACTTCTACATGAGACCAGAAAATTGGAAAAGGAACTAATGGCAGAAGAAATTGACAGGAATGCTGAGAAACTTGATCAGTTATACATGCGAAGCACCCACGGTATGGCATCACAAATTGTTTCACTGTCTAATGGTGACAATCAGTCCATCAACATTGACACCAATTTGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0000967 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004534 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008409 GO:0009056 GO:0009057 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010586 GO:0010587 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0016075 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019222 GO:0019439 GO:0022613 GO:0034470 GO:0034471 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060147 GO:0060149 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0071025 GO:0071027 GO:0071029 GO:0071035 GO:0071046 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03008 ko03018 map03008 map03018

Pfam Domains

Protein Families

XRN_N

Protein Analysis

692

Amino Acids

80.22

Weight (kDa)

5.92

Isoelectric Point (pI)

46.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
XRN_N	PF03159	1 - 256	1.8e-100	XRN 5'-3' exonuclease N-terminus
XRN_M	PF17846	281 - 453	3.1e-42	Xrn1 helical domain
XRN_M	PF17846	483 - 688	3.5e-88	Xrn1 helical domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004246)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18720 FvH4_7g18720 FvH4_7g18720 FvH4_7g18720
malus_domestica	MD00G1128400.v1.1 MD11G1172900.v1.1
prunus_persica	Prupe.6G141200_v2.0.a1 Prupe.6G141200_v2.0.a1 Prupe.6G141200_v2.0.a1 Prupe.6G141200_v2.0.a1
pyrus_communis	pycom11g14580 pycom520g00080
rosa_chinensis	RchiOBHm_Chr1g0334231 RchiOBHm_Chr5g0047421 RchiOBHm_Chr5g0047601 RchiOBHm_Chr5g0047631 RchiOBHm_Chr5g0047791 RchiOBHm_Chr5g0047991
rosa_multiflora	Rmu_sc0000148.1_g000001 Rmu_sc0000148.1_g000016 Rmu_sc0003441.1_g000004
rosa_roxburghii	Rroxscaffold_1G00029700 Rroxscaffold_1G00033910
rosa_rugosa	Rorug05G0236400
rosa_samantha	Rh1CG129900 Rh5AG315300 Rh5AG315400 Rh5DG335300 Rh5DG335400
rosa_wichuraiana	Rw0G017980 Rw5G029460 Rw5G029520 Rw5G029550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	719
AatII	GACGTC	1 cut(s)	1144
AccB1I	GGYRCC	1 cut(s)	1700
AccB7I	CCANNNNNTGG	1 cut(s)	2008
AccI	GTMKAC	1 cut(s)	966
AciI	CCGC	4 cut(s)	685, 710, 893, 1238
AclI	AACGTT	1 cut(s)	273
AclWI	GGATC	5 cut(s)	87, 668, 720, 818, 1228
AcsI	RAATTY	5 cut(s)	930, 977, 1064, 1280, 1502
AcuI	CTGAAG	1 cut(s)	420
AcyI	GRCGYC	1 cut(s)	1141
AfaI	GTAC	4 cut(s)	41, 512, 1040, 1458
AfeI	AGCGCT	1 cut(s)	1753
AfiI	CCNNNNNNNGG	7 cut(s)	49, 499, 617, 1614, 1675, 2008, 2073
AhdI	GACNNNNNGTC	1 cut(s)	2047
AjnI	CCWGG	3 cut(s)	350, 493, 610
AluBI	AGCT	5 cut(s)	99, 537, 805, 1560, 1673
AluI	AGCT	5 cut(s)	99, 537, 805, 1560, 1673
Alw21I	GWGCWC	1 cut(s)	1367
Alw26I	GTCTC	1 cut(s)	1910
AlwI	GGATC	5 cut(s)	87, 668, 720, 818, 1228
Ama87I	CYCGRG	1 cut(s)	1519
Aor51HI	AGCGCT	1 cut(s)	1753
AoxI	GGCC	2 cut(s)	1299, 1666
ApoI	RAATTY	5 cut(s)	930, 977, 1064, 1280, 1502
Asp700I	GAANNNNTTC	3 cut(s)	977, 1100, 1856
AspLEI	GCGC	1 cut(s)	1754
AspS9I	GGNCC	3 cut(s)	1604, 1643, 1666
AsuC2I	CCSGG	3 cut(s)	176, 1520, 1521
AsuHPI	GGTGA	7 cut(s)	164, 404, 481, 641, 740, 1349, 2051
AsuII	TTCGAA	3 cut(s)	249, 532, 1833
AvaI	CYCGRG	1 cut(s)	1519
AvaII	GGWCC	2 cut(s)	1604, 1643
AxyI	CCTNAGG	1 cut(s)	1767
BaeGI	GKGCMC	1 cut(s)	1705
BanI	GGYRCC	1 cut(s)	1700
BarI	GAAGNNNNNNTAC	2 cut(s)	1022, 1054
BbsI	GAAGAC	2 cut(s)	226, 1179
Bbv12I	GWGCWC	1 cut(s)	1367
BccI	CCATC	8 cut(s)	19, 168, 188, 305, 1618, 1783, 1841, 2060
BcgI	CGANNNNNNTGC	2 cut(s)	106, 140
BciT130I	CCWGG	3 cut(s)	352, 495, 612
BclI	TGATCA	1 cut(s)	1978
BcnI	CCSGG	3 cut(s)	176, 1520, 1521
BcoDI	GTCTC	1 cut(s)	1910
BfaI	CTAG	4 cut(s)	89, 140, 1053, 1670
BfmI	CTRYAG	3 cut(s)	1224, 1470, 1716
BfoI	RGCGCY	1 cut(s)	1755
Bme1390I	CCNGG	6 cut(s)	176, 352, 495, 612, 1520, 1521
Bme18I	GGWCC	2 cut(s)	1604, 1643
BmeRI	GACNNNNNGTC	1 cut(s)	2047
BmeT110I	CYCGRG	1 cut(s)	1519
BmgT120I	GGNCC	3 cut(s)	1604, 1643, 1666
BmiI	GGNNCC	3 cut(s)	9, 1606, 1702
BmrFI	CCNGG	6 cut(s)	176, 352, 495, 612, 1520, 1521
BmsI	GCATC	5 cut(s)	82, 589, 697, 1171, 2021
BpiI	GAAGAC	2 cut(s)	226, 1179
BpmI	CTGGAG	2 cut(s)	592, 821
Bpu10I	CCTNAGC	1 cut(s)	1674
Bpu14I	TTCGAA	3 cut(s)	249, 532, 1833
BpuEI	CTTGAG	1 cut(s)	872
BpuMI	CCSGG	3 cut(s)	176, 1520, 1521
BsaBI	GATNNNNATC	1 cut(s)	711
BsaHI	GRCGYC	1 cut(s)	1141
BsaI	GGTCTC	1 cut(s)	1910
BsaJI	CCNNGG	8 cut(s)	284, 323, 493, 522, 611, 1519, 1520, 2002
BsaWI	WCCGGW	1 cut(s)	1601
Bsc4I	CCNNNNNNNGG	7 cut(s)	49, 499, 617, 1614, 1675, 2008, 2073
Bse21I	CCTNAGG	1 cut(s)	1767
Bse3DI	GCAATG	2 cut(s)	375, 688
Bse8I	GATNNNNATC	1 cut(s)	711
BseBI	CCWGG	3 cut(s)	352, 495, 612
BseDI	CCNNGG	8 cut(s)	284, 323, 493, 522, 611, 1519, 1520, 2002
BseGI	GGATG	4 cut(s)	160, 712, 1445, 1852
BseJI	GATNNNNATC	1 cut(s)	711
BseLI	CCNNNNNNNGG	7 cut(s)	49, 499, 617, 1614, 1675, 2008, 2073
BseMI	GCAATG	2 cut(s)	375, 688
BseMII	CTCAG	4 cut(s)	822, 1150, 1688, 1959
BseSI	GKGCMC	1 cut(s)	1705
BshFI	GGCC	2 cut(s)	1301, 1668
BshNI	GGYRCC	1 cut(s)	1700
BsiHKAI	GWGCWC	1 cut(s)	1367
BsiHKCI	CYCGRG	1 cut(s)	1519
BsiSI	CCGG	3 cut(s)	176, 1520, 1602
BslFI	GGGAC	2 cut(s)	590, 1590
BslI	CCNNNNNNNGG	7 cut(s)	49, 499, 617, 1614, 1675, 2008, 2073
BsmAI	GTCTC	1 cut(s)	1910
BsmFI	GGGAC	2 cut(s)	590, 1590
BsmI	GAATGC	1 cut(s)	1969
BsnI	GGCC	2 cut(s)	1301, 1668
Bso31I	GGTCTC	1 cut(s)	1910
BsoBI	CYCGRG	1 cut(s)	1519
Bsp119I	TTCGAA	3 cut(s)	249, 532, 1833
Bsp1286I	GDGCHC	2 cut(s)	1367, 1705
Bsp1407I	TGTACA	1 cut(s)	510
Bsp143I	GATC	9 cut(s)	79, 673, 712, 823, 847, 1112, 1220, 1321, 1978
BspACI	CCGC	4 cut(s)	685, 710, 893, 1238
BspANI	GGCC	2 cut(s)	1301, 1668
BspCNI	CTCAG	4 cut(s)	823, 1149, 1687, 1960
BspHI	TCATGA	2 cut(s)	934, 1021
BspLI	GGNNCC	3 cut(s)	9, 1606, 1702
BspMAI	CTGCAG	1 cut(s)	1228
BspPI	GGATC	5 cut(s)	87, 668, 720, 818, 1228
BspQI	GCTCTTC	1 cut(s)	534
BspT104I	TTCGAA	3 cut(s)	249, 532, 1833
BspT107I	GGYRCC	1 cut(s)	1700
BspTNI	GGTCTC	1 cut(s)	1910
BsrDI	GCAATG	2 cut(s)	375, 688
BsrGI	TGTACA	1 cut(s)	510
BssECI	CCNNGG	8 cut(s)	284, 323, 493, 522, 611, 1519, 1520, 2002
BssMI	GATC	9 cut(s)	79, 673, 712, 823, 847, 1112, 1220, 1321, 1978
BssNI	GRCGYC	1 cut(s)	1141
BssT1I	CCWWGG	2 cut(s)	284, 522
Bst2UI	CCWGG	3 cut(s)	352, 495, 612
Bst4CI	ACNGT	4 cut(s)	661, 964, 2006, 2031
Bst6I	CTCTTC	5 cut(s)	399, 534, 1086, 1788, 1847
BstACI	GRCGYC	1 cut(s)	1141
BstAUI	TGTACA	1 cut(s)	510
BstBI	TTCGAA	3 cut(s)	249, 532, 1833
BstC8I	GCNNGC	4 cut(s)	97, 101, 348, 1303
BstDEI	CTNAG	7 cut(s)	413, 761, 831, 1136, 1674, 1767, 1968
BstDSI	CCRYGG	1 cut(s)	2002
BstENI	CCTNNNNNAGG	2 cut(s)	615, 1673
BstF5I	GGATG	4 cut(s)	160, 712, 1445, 1852
BstH2I	RGCGCY	1 cut(s)	1755
BstHHI	GCGC	1 cut(s)	1754
BstKTI	GATC	9 cut(s)	82, 676, 715, 826, 850, 1115, 1223, 1324, 1981
BstMAI	GTCTC	1 cut(s)	1910
BstMBI	GATC	9 cut(s)	79, 673, 712, 823, 847, 1112, 1220, 1321, 1978
BstMWI	GCNNNNNNNGC	3 cut(s)	326, 352, 811
BstNI	CCWGG	3 cut(s)	352, 495, 612
BstNSI	RCATGY	4 cut(s)	779, 814, 919, 1993
BstSCI	CCNGG	6 cut(s)	174, 350, 493, 610, 1518, 1519
BstSFI	CTRYAG	3 cut(s)	1224, 1470, 1716
BstSLI	GKGCMC	1 cut(s)	1705
BstV2I	GAAGAC	2 cut(s)	226, 1179
BstX2I	RGATCY	2 cut(s)	712, 1220
BstXI	CCANNNNNNTGG	2 cut(s)	70, 1927
BstYI	RGATCY	2 cut(s)	712, 1220
Bsu36I	CCTNAGG	1 cut(s)	1767
BsuRI	GGCC	2 cut(s)	1301, 1668
BtgI	CCRYGG	1 cut(s)	2002
BtsCI	GGATG	4 cut(s)	160, 712, 1445, 1852
BtsI	GCAGTG	1 cut(s)	393
BtsIMutI	CAGTG	4 cut(s)	255, 393, 1347, 2027
Cac8I	GCNNGC	4 cut(s)	97, 101, 348, 1303
CciI	TCATGA	2 cut(s)	934, 1021
CfoI	GCGC	1 cut(s)	1754
Cfr13I	GGNCC	3 cut(s)	1604, 1643, 1666
Cfr9I	CCCGGG	1 cut(s)	1519
Csp6I	GTAC	4 cut(s)	40, 511, 1039, 1457
CspCI	CAANNNNNGTGG	2 cut(s)	1792, 1827
CviQI	GTAC	4 cut(s)	40, 511, 1039, 1457
DdeI	CTNAG	7 cut(s)	413, 761, 831, 1136, 1674, 1767, 1968
DpnI	GATC	9 cut(s)	81, 675, 714, 825, 849, 1114, 1222, 1323, 1980
DpnII	GATC	9 cut(s)	79, 673, 712, 823, 847, 1112, 1220, 1321, 1978
DraI	TTTAAA	1 cut(s)	1711
DriI	GACNNNNNGTC	1 cut(s)	2047
Eam1104I	CTCTTC	5 cut(s)	399, 534, 1086, 1788, 1847
Eam1105I	GACNNNNNGTC	1 cut(s)	2047
EarI	CTCTTC	5 cut(s)	399, 534, 1086, 1788, 1847
Eco130I	CCWWGG	2 cut(s)	284, 522
Eco31I	GGTCTC	1 cut(s)	1910
Eco47I	GGWCC	2 cut(s)	1604, 1643
Eco47III	AGCGCT	1 cut(s)	1753
Eco57I	CTGAAG	1 cut(s)	420
Eco81I	CCTNAGG	1 cut(s)	1767
Eco88I	CYCGRG	1 cut(s)	1519
EcoNI	CCTNNNNNAGG	2 cut(s)	615, 1673
EcoO109I	RGGNCCY	1 cut(s)	1666
EcoRI	GAATTC	2 cut(s)	977, 1280
EcoRII	CCWGG	3 cut(s)	350, 493, 610
EcoT14I	CCWWGG	2 cut(s)	284, 522
ErhI	CCWWGG	2 cut(s)	284, 522
FalI	AAGNNNNNCTT	2 cut(s)	735, 767
FaqI	GGGAC	2 cut(s)	590, 1590
FauI	CCCGC	2 cut(s)	692, 886
FbaI	TGATCA	1 cut(s)	1978
FblI	GTMKAC	1 cut(s)	966
FokI	GGATG	4 cut(s)	147, 719, 1432, 1859
FspBI	CTAG	4 cut(s)	89, 140, 1053, 1670
GlaI	GCGC	1 cut(s)	1753
GsuI	CTGGAG	2 cut(s)	592, 821
HaeII	RGCGCY	1 cut(s)	1755
HaeIII	GGCC	2 cut(s)	1301, 1668
HapII	CCGG	3 cut(s)	176, 1520, 1602
HhaI	GCGC	1 cut(s)	1754
Hin1I	GRCGYC	1 cut(s)	1141
Hin6I	GCGC	1 cut(s)	1752
HinP1I	GCGC	1 cut(s)	1752
HindIII	AAGCTT	1 cut(s)	97
HpaII	CCGG	3 cut(s)	176, 1520, 1602
HphI	GGTGA	7 cut(s)	164, 404, 481, 641, 740, 1349, 2051
Hpy166II	GTNNAC	4 cut(s)	34, 748, 967, 1133
Hpy8I	GTNNAC	4 cut(s)	34, 748, 967, 1133
HpyCH4III	ACNGT	4 cut(s)	661, 964, 2006, 2031
HpyCH4IV	ACGT	5 cut(s)	273, 550, 646, 1129, 1141
HpyF10VI	GCNNNNNNNGC	3 cut(s)	326, 352, 811
HpyF3I	CTNAG	7 cut(s)	413, 761, 831, 1136, 1674, 1767, 1968
HpySE526I	ACGT	5 cut(s)	273, 550, 646, 1129, 1141
Hsp92I	GRCGYC	1 cut(s)	1141
HspAI	GCGC	1 cut(s)	1752
Ksp22I	TGATCA	1 cut(s)	1978
Kzo9I	GATC	9 cut(s)	79, 673, 712, 823, 847, 1112, 1220, 1321, 1978
LguI	GCTCTTC	1 cut(s)	534
LmnI	GCTCC	4 cut(s)	325, 802, 1082, 1362
LweI	GCATC	5 cut(s)	82, 589, 697, 1171, 2021
MaeI	CTAG	4 cut(s)	89, 140, 1053, 1670
MaeII	ACGT	5 cut(s)	273, 550, 646, 1129, 1141
MaeIII	GTNAC	2 cut(s)	647, 2039
MalI	GATC	9 cut(s)	81, 675, 714, 825, 849, 1114, 1222, 1323, 1980
MboI	GATC	9 cut(s)	79, 673, 712, 823, 847, 1112, 1220, 1321, 1978
MfeI	CAATTG	2 cut(s)	945, 1212
MflI	RGATCY	2 cut(s)	712, 1220
MhlI	GDGCHC	2 cut(s)	1367, 1705
MroXI	GAANNNNTTC	3 cut(s)	977, 1100, 1856
MseI	TTAA	6 cut(s)	360, 554, 840, 1200, 1554, 1710
MslI	CAYNNNNRTG	2 cut(s)	68, 939
MspA1I	CMGCKG	1 cut(s)	1238
MspI	CCGG	3 cut(s)	176, 1520, 1602
MspR9I	CCNGG	6 cut(s)	176, 352, 495, 612, 1520, 1521
MunI	CAATTG	2 cut(s)	945, 1212
Mva1269I	GAATGC	1 cut(s)	1969
MvaI	CCWGG	3 cut(s)	352, 495, 612
MwoI	GCNNNNNNNGC	3 cut(s)	326, 352, 811
NciI	CCSGG	3 cut(s)	176, 1520, 1521
NdeII	GATC	9 cut(s)	79, 673, 712, 823, 847, 1112, 1220, 1321, 1978
NlaIV	GGNNCC	3 cut(s)	9, 1606, 1702
NmuCI	GTSAC	2 cut(s)	647, 2039
NspI	RCATGY	4 cut(s)	779, 814, 919, 1993
NspV	TTCGAA	3 cut(s)	249, 532, 1833
PagI	TCATGA	2 cut(s)	934, 1021
PciSI	GCTCTTC	1 cut(s)	534
PcsI	WCGNNNNNNNCGW	1 cut(s)	652
PctI	GAATGC	1 cut(s)	1969
PdmI	GAANNNNTTC	3 cut(s)	977, 1100, 1856
PflMI	CCANNNNNTGG	1 cut(s)	2008
PsiI	TTATAA	1 cut(s)	719
Psp1406I	AACGTT	1 cut(s)	273
Psp6I	CCWGG	3 cut(s)	350, 493, 610
PspGI	CCWGG	3 cut(s)	350, 493, 610
PspN4I	GGNNCC	3 cut(s)	9, 1606, 1702
PspPI	GGNCC	3 cut(s)	1604, 1643, 1666
PstI	CTGCAG	1 cut(s)	1228
PsuI	RGATCY	2 cut(s)	712, 1220
RsaI	GTAC	4 cut(s)	41, 512, 1040, 1458
RsaNI	GTAC	4 cut(s)	40, 511, 1039, 1457
RseI	CAYNNNNRTG	2 cut(s)	68, 939
SapI	GCTCTTC	1 cut(s)	534
SaqAI	TTAA	6 cut(s)	360, 554, 840, 1200, 1554, 1710
Sau3AI	GATC	9 cut(s)	79, 673, 712, 823, 847, 1112, 1220, 1321, 1978
Sau96I	GGNCC	3 cut(s)	1604, 1643, 1666
ScrFI	CCNGG	6 cut(s)	176, 352, 495, 612, 1520, 1521
SduI	GDGCHC	2 cut(s)	1367, 1705
SfaNI	GCATC	5 cut(s)	82, 589, 697, 1171, 2021
SfcI	CTRYAG	3 cut(s)	1224, 1470, 1716
SfuI	TTCGAA	3 cut(s)	249, 532, 1833
SinI	GGWCC	2 cut(s)	1604, 1643
SmaI	CCCGGG	1 cut(s)	1521
SmiMI	CAYNNNNRTG	2 cut(s)	68, 939
SmlI	CTYRAG	1 cut(s)	851
SmoI	CTYRAG	1 cut(s)	851
SsiI	CCGC	4 cut(s)	685, 710, 893, 1238
SspI	AATATT	3 cut(s)	244, 988, 1101
SspMI	CTAG	4 cut(s)	89, 140, 1053, 1670
StyD4I	CCNGG	6 cut(s)	174, 350, 493, 610, 1518, 1519
StyI	CCWWGG	2 cut(s)	284, 522
TaaI	ACNGT	4 cut(s)	661, 964, 2006, 2031
TaiI	ACGT	5 cut(s)	276, 553, 649, 1132, 1144
TaqI	TCGA	5 cut(s)	126, 249, 532, 1163, 1833
TatI	WGTACW	1 cut(s)	510
Tru1I	TTAA	6 cut(s)	360, 554, 840, 1200, 1554, 1710
Tru9I	TTAA	6 cut(s)	360, 554, 840, 1200, 1554, 1710
TscAI	CASTG	4 cut(s)	262, 393, 1354, 2034
TseFI	GTSAC	2 cut(s)	647, 2039
Tsp45I	GTSAC	2 cut(s)	647, 2039
TspGWI	ACGGA	1 cut(s)	515
TspMI	CCCGGG	1 cut(s)	1519
TspRI	CASTG	4 cut(s)	262, 393, 1354, 2034
Van91I	CCANNNNNTGG	1 cut(s)	2008
VpaK11BI	GGWCC	2 cut(s)	1604, 1643
XagI	CCTNNNNNAGG	2 cut(s)	615, 1673
XapI	RAATTY	5 cut(s)	930, 977, 1064, 1280, 1502
XbaI	TCTAGA	3 cut(s)	88, 139, 1052
XceI	RCATGY	4 cut(s)	779, 814, 919, 1993
XcmI	CCANNNNNNNNNTGG	2 cut(s)	695, 1617
XmaI	CCCGGG	1 cut(s)	1519
XmiI	GTMKAC	1 cut(s)	966
XmnI	GAANNNNTTC	3 cut(s)	977, 1100, 1856
XspI	CTAG	4 cut(s)	89, 140, 1053, 1670
ZraI	GACGTC	1 cut(s)	1142

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.