5'-3' exoribonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g18720 FvH4_7g18720 FvH4_7g18720 FvH4_7g18720 |
| malus_domestica | MD00G1128400.v1.1 MD11G1172900.v1.1 |
| prunus_persica | Prupe.6G141200_v2.0.a1 Prupe.6G141200_v2.0.a1 Prupe.6G141200_v2.0.a1 Prupe.6G141200_v2.0.a1 |
| pyrus_communis | pycom11g14580 pycom520g00080 |
| rosa_chinensis | RchiOBHm_Chr1g0334231 RchiOBHm_Chr5g0047421 RchiOBHm_Chr5g0047601 RchiOBHm_Chr5g0047631 RchiOBHm_Chr5g0047791 RchiOBHm_Chr5g0047991 |
| rosa_multiflora | Rmu_sc0000148.1_g000001 Rmu_sc0000148.1_g000016 Rmu_sc0003441.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00029700 Rroxscaffold_1G00033910 |
| rosa_rugosa | Rorug05G0236400 |
| rosa_samantha | Rh1CG129900 Rh5AG315300 Rh5AG315400 Rh5DG335300 Rh5DG335400 |
| rosa_wichuraiana | Rw0G017980 Rw5G029460 Rw5G029520 Rw5G029550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 223 |
| AclWI | GGATC | 1 cut(s) | 76 |
| AfaI | GTAC | 1 cut(s) | 127 |
| AjnI | CCWGG | 1 cut(s) | 121 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 132, 164 |
| AluBI | AGCT | 3 cut(s) | 19, 165, 235 |
| AluI | AGCT | 3 cut(s) | 19, 165, 235 |
| Alw21I | GWGCWC | 2 cut(s) | 45, 237 |
| AlwI | GGATC | 1 cut(s) | 76 |
| ApeKI | GCWGC | 1 cut(s) | 165 |
| BaeGI | GKGCMC | 1 cut(s) | 58 |
| BanII | GRGCYC | 1 cut(s) | 237 |
| BauI | CACGAG | 1 cut(s) | 32 |
| Bbv12I | GWGCWC | 2 cut(s) | 45, 237 |
| BbvI | GCAGC | 1 cut(s) | 152 |
| BceAI | ACGGC | 1 cut(s) | 144 |
| BciT130I | CCWGG | 1 cut(s) | 123 |
| BfmI | CTRYAG | 1 cut(s) | 46 |
| BglII | AGATCT | 1 cut(s) | 28 |
| BisI | GCNGC | 1 cut(s) | 166 |
| BlsI | GCNGC | 1 cut(s) | 167 |
| Bme1390I | CCNGG | 1 cut(s) | 123 |
| BmiI | GGNNCC | 1 cut(s) | 212 |
| BmrFI | CCNGG | 1 cut(s) | 123 |
| BpmI | CTGGAG | 2 cut(s) | 41, 127 |
| BpuEI | CTTGAG | 1 cut(s) | 107 |
| Bse1I | ACTGG | 1 cut(s) | 15 |
| BseBI | CCWGG | 1 cut(s) | 123 |
| BseNI | ACTGG | 1 cut(s) | 15 |
| BseRI | GAGGAG | 1 cut(s) | 176 |
| BseSI | GKGCMC | 1 cut(s) | 58 |
| BseXI | GCAGC | 1 cut(s) | 152 |
| BsiHKAI | GWGCWC | 2 cut(s) | 45, 237 |
| Bsp1286I | GDGCHC | 3 cut(s) | 45, 58, 237 |
| Bsp143I | GATC | 2 cut(s) | 28, 81 |
| BspACI | CCGC | 1 cut(s) | 223 |
| BspLI | GGNNCC | 1 cut(s) | 212 |
| BspPI | GGATC | 1 cut(s) | 76 |
| BsrI | ACTGG | 1 cut(s) | 15 |
| BssMI | GATC | 2 cut(s) | 28, 81 |
| BssSI | CACGAG | 1 cut(s) | 32 |
| Bst2BI | CACGAG | 1 cut(s) | 32 |
| Bst2UI | CCWGG | 1 cut(s) | 123 |
| BstKTI | GATC | 2 cut(s) | 31, 84 |
| BstMBI | GATC | 2 cut(s) | 28, 81 |
| BstNI | CCWGG | 1 cut(s) | 123 |
| BstSCI | CCNGG | 1 cut(s) | 121 |
| BstSFI | CTRYAG | 1 cut(s) | 46 |
| BstSLI | GKGCMC | 1 cut(s) | 58 |
| BstV1I | GCAGC | 1 cut(s) | 152 |
| BstX2I | RGATCY | 2 cut(s) | 28, 81 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 169 |
| BstYI | RGATCY | 2 cut(s) | 28, 81 |
| CsiI | ACCWGGT | 1 cut(s) | 121 |
| Csp6I | GTAC | 1 cut(s) | 126 |
| CviAII | CATG | 1 cut(s) | 146 |
| CviJI | RGCY | 4 cut(s) | 19, 131, 165, 235 |
| CviKI_1 | RGCY | 4 cut(s) | 19, 131, 165, 235 |
| CviQI | GTAC | 1 cut(s) | 126 |
| DpnI | GATC | 2 cut(s) | 30, 83 |
| DpnII | GATC | 2 cut(s) | 28, 81 |
| Ecl136II | GAGCTC | 1 cut(s) | 235 |
| Eco24I | GRGCYC | 1 cut(s) | 237 |
| Eco53kI | GAGCTC | 1 cut(s) | 235 |
| EcoICRI | GAGCTC | 1 cut(s) | 235 |
| EcoRII | CCWGG | 1 cut(s) | 121 |
| EcoT38I | GRGCYC | 1 cut(s) | 237 |
| FaeI | CATG | 1 cut(s) | 149 |
| FaiI | YATR | 2 cut(s) | 8, 147 |
| FatI | CATG | 1 cut(s) | 145 |
| FauI | CCCGC | 1 cut(s) | 216 |
| Fnu4HI | GCNGC | 1 cut(s) | 166 |
| FriOI | GRGCYC | 1 cut(s) | 237 |
| Fsp4HI | GCNGC | 1 cut(s) | 166 |
| GluI | GCNGC | 1 cut(s) | 166 |
| GsuI | CTGGAG | 2 cut(s) | 41, 127 |
| Hin1II | CATG | 1 cut(s) | 149 |
| HinfI | GANTC | 2 cut(s) | 92, 115 |
| Hpy188III | TCNNGA | 2 cut(s) | 34, 106 |
| HpyCH4IV | ACGT | 1 cut(s) | 72 |
| HpySE526I | ACGT | 1 cut(s) | 72 |
| Hsp92II | CATG | 1 cut(s) | 149 |
| Kzo9I | GATC | 2 cut(s) | 28, 81 |
| LmnI | GCTCC | 2 cut(s) | 232, 240 |
| LpnPI | CCDG | 6 cut(s) | 5, 91, 108, 135, 150, 175 |
| Lsp1109I | GCAGC | 1 cut(s) | 152 |
| MabI | ACCWGGT | 1 cut(s) | 121 |
| MaeII | ACGT | 1 cut(s) | 72 |
| MalI | GATC | 2 cut(s) | 30, 83 |
| MboI | GATC | 2 cut(s) | 28, 81 |
| MflI | RGATCY | 2 cut(s) | 28, 81 |
| MhlI | GDGCHC | 3 cut(s) | 45, 58, 237 |
| MnlI | CCTC | 5 cut(s) | 16, 82, 190, 194, 197 |
| MseI | TTAA | 1 cut(s) | 60 |
| MspA1I | CMGCKG | 2 cut(s) | 19, 165 |
| MspR9I | CCNGG | 1 cut(s) | 123 |
| MvaI | CCWGG | 1 cut(s) | 123 |
| NdeII | GATC | 2 cut(s) | 28, 81 |
| NlaIII | CATG | 1 cut(s) | 149 |
| NlaIV | GGNNCC | 1 cut(s) | 212 |
| PfeI | GAWTC | 2 cut(s) | 92, 115 |
| PkrI | GCNGC | 1 cut(s) | 167 |
| Psp124BI | GAGCTC | 1 cut(s) | 237 |
| Psp6I | CCWGG | 1 cut(s) | 121 |
| PspGI | CCWGG | 1 cut(s) | 121 |
| PspN4I | GGNNCC | 1 cut(s) | 212 |
| PsuI | RGATCY | 2 cut(s) | 28, 81 |
| PvuII | CAGCTG | 2 cut(s) | 19, 165 |
| RsaI | GTAC | 1 cut(s) | 127 |
| RsaNI | GTAC | 1 cut(s) | 126 |
| SacI | GAGCTC | 1 cut(s) | 237 |
| SaqAI | TTAA | 1 cut(s) | 60 |
| SatI | GCNGC | 1 cut(s) | 166 |
| Sau3AI | GATC | 2 cut(s) | 28, 81 |
| ScrFI | CCNGG | 1 cut(s) | 123 |
| SduI | GDGCHC | 3 cut(s) | 45, 58, 237 |
| SetI | ASST | 5 cut(s) | 21, 75, 124, 167, 237 |
| SexAI | ACCWGGT | 1 cut(s) | 121 |
| SfcI | CTRYAG | 1 cut(s) | 46 |
| SmlI | CTYRAG | 1 cut(s) | 86 |
| SmoI | CTYRAG | 1 cut(s) | 86 |
| SsiI | CCGC | 1 cut(s) | 223 |
| SstI | GAGCTC | 1 cut(s) | 237 |
| StyD4I | CCNGG | 1 cut(s) | 121 |
| TaiI | ACGT | 1 cut(s) | 75 |
| TfiI | GAWTC | 2 cut(s) | 92, 115 |
| Tru1I | TTAA | 1 cut(s) | 60 |
| Tru9I | TTAA | 1 cut(s) | 60 |
| TseI | GCWGC | 1 cut(s) | 165 |