Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004246

Physical Location & Seq

Genomic Coordinates Reverse (-)

45711356 .. 45715669

Gene Structure 4314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G029550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGATGAAAAAGCCTTATCAGTTTCTGCATGTTTGGATTTTGAGGGAATATCTGGAGCTTGACATGCAAATCAGTGATCCTCCTGAGAACTTTAAGTTTGATCTTGAGCGTATCATTGATGATTTCATCTTTATATGTTTCTTCGCGGGAAATGATTTTTTACCCCACATGCCAACATTGGAAATTCATGAGGGTGCAATTGATTTGCTGATGACAGTCTACAAGAAAGAATTCAAGAATATTGGTGGCTATTTGGTTGATATGATTCAGGTTCATGACAAGAAGTTGGGGTACATCAAACTATCTAGAGTTGAGAAATTTGTTCTCCTTATTGGAGCATTTGAAGAGAAAATATTCAAGAAAAGATCAGATATACAAGAACGTAAACTCAGACGTCTTTGCTATAAAAATGATTGGACAGAGGAAGACATTGATGCTGGAAGTTCAAACTTTAATTTCGAGGCAATTGAAGGATCTGCAGTTGTTTCAGTGGATAATGTTTCATCTTCCAAAATAGTGGAAAACACAAAGGAATTCAAGCAAAAATTGAAGGCCAGCATTAGAAGAAAATCTGATCTGTTTAGGAATGGTGATTTTGGCACTGTCAAAGTACGATTGGGTGCTACAGGATTCAAAGAAAGATATTACAAATGCAAATTTTCTGCTGAAAGCCCGGGGGAGATTGAAAACAAAAGGAAGGAAGTAGTTAAAAGCTACACAGAAGGACTGCTCTGGGTTCTTTTATACTACTTTTCCGGCCCCCCATCGTGGAAATGGTTTTATCCTTTTCATTATGGACCATTTGCCTCTGATATGAAGGGCCTAGCTCAGGTCAAACCACAATTTGAGAAAGGTTCCCCATTTAAACCTATAGATACTCTCATGGCTGTCCTGCCACCAAGAAGCGCTCATGCACTTCCTAAGGATTATAGGACACTTATGATGGAAGAGTGTTCCACAATCATTGATTTTTACCCTTCTGACTTCGAAATTGACATGGATGGGAAGAGATTTACGTGGCAGGGTATCTGCAAACTTCCCTTTATAGAAGAATCCCGACTTCTACATGAGACCAGAAAATTGGAAAAGGAACTAATGGCAGAAGAAATTGACAGGAATGCTGAGAAACTTGATCAGTTATTCATGCGAAGCACCCACAGTATGGCATCACAAATTGTTTCACTGTCTAATGGTGACAATCAGTCAATCAAGATTGACACCAATTTGAGCTTTGGAATCAGTGGTTTTATCCGGCAGCTTGATGACAATGATGCCAATGTCAAAGAAAGAGATGATAGCTCTGAAGAAGACTCTGTCTTATGTGCCCTCTATGAGCTTCCTAATACAAGTCTGCATATGCCTCGTTTACTTGATGGTGTACAACATCCTTCCAAGACAATCAATGAACACGAGCTTATGGAAACAGTTCTATGGCATGAATGTCAGGGAAATGTGACCACCCGCAGCATCCAGCAAGTACAGGCAAGGTTTAGTCCGTTCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0000967 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004534 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008409 GO:0009056 GO:0009057 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010586 GO:0010587 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0016075 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019222 GO:0019439 GO:0022613 GO:0034470 GO:0034471 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060147 GO:0060149 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0071025 GO:0071027 GO:0071029 GO:0071035 GO:0071046 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03008 ko03018 map03008 map03018

Pfam Domains

Protein Families

XRN_N

Protein Analysis

501

Amino Acids

58.29

Weight (kDa)

5.85

Isoelectric Point (pI)

40.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
XRN_M	PF17846	32 - 470	1.1e-149	Xrn1 helical domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004246)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18720 FvH4_7g18720 FvH4_7g18720 FvH4_7g18720
malus_domestica	MD00G1128400.v1.1 MD11G1172900.v1.1
prunus_persica	Prupe.6G141200_v2.0.a1 Prupe.6G141200_v2.0.a1 Prupe.6G141200_v2.0.a1 Prupe.6G141200_v2.0.a1
pyrus_communis	pycom11g14580 pycom520g00080
rosa_chinensis	RchiOBHm_Chr1g0334231 RchiOBHm_Chr5g0047421 RchiOBHm_Chr5g0047601 RchiOBHm_Chr5g0047631 RchiOBHm_Chr5g0047791 RchiOBHm_Chr5g0047991
rosa_multiflora	Rmu_sc0000148.1_g000001 Rmu_sc0000148.1_g000016 Rmu_sc0003441.1_g000004
rosa_roxburghii	Rroxscaffold_1G00029700 Rroxscaffold_1G00033910
rosa_rugosa	Rorug05G0236400
rosa_samantha	Rh1CG129900 Rh5AG315300 Rh5AG315400 Rh5DG335300 Rh5DG335400
rosa_wichuraiana	Rw0G017980 Rw5G029460 Rw5G029520 Rw5G029550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	397
AccB7I	CCANNNNNTGG	1 cut(s)	1162
AccI	GTMKAC	1 cut(s)	219
AccII	CGCG	1 cut(s)	146
AciI	CCGC	2 cut(s)	146, 1462
AclWI	GGATC	2 cut(s)	71, 481
AcsI	RAATTY	5 cut(s)	183, 230, 317, 533, 656
AcuI	CTGAAG	1 cut(s)	1323
AcyI	GRCGYC	1 cut(s)	394
AfaI	GTAC	4 cut(s)	293, 612, 1380, 1479
AfeI	AGCGCT	1 cut(s)	907
AfiI	CCNNNNNNNGG	3 cut(s)	768, 829, 1162
AgsI	TTSAA	9 cut(s)	235, 344, 358, 447, 470, 538, 550, 634, 686
AhdI	GACNNNNNGTC	1 cut(s)	1201
AluBI	AGCT	8 cut(s)	58, 714, 827, 1230, 1258, 1299, 1336, 1414
AluI	AGCT	8 cut(s)	58, 714, 827, 1230, 1258, 1299, 1336, 1414
Alw26I	GTCTC	1 cut(s)	1064
AlwI	GGATC	2 cut(s)	71, 481
AlwNI	CAGNNNCTG	1 cut(s)	25
Ama87I	CYCGRG	1 cut(s)	673
Aor51HI	AGCGCT	1 cut(s)	907
AoxI	GGCC	3 cut(s)	552, 757, 820
ApeKI	GCWGC	2 cut(s)	1255, 1464
ApoI	RAATTY	5 cut(s)	183, 230, 317, 533, 656
Asp700I	GAANNNNTTC	3 cut(s)	230, 353, 1425
AspLEI	GCGC	1 cut(s)	908
AspS9I	GGNCC	3 cut(s)	758, 797, 820
AsuC2I	CCSGG	2 cut(s)	674, 675
AsuHPI	GGTGA	2 cut(s)	602, 1205
AsuII	TTCGAA	1 cut(s)	987
AvaI	CYCGRG	1 cut(s)	673
AvaII	GGWCC	1 cut(s)	797
AxyI	CCTNAGG	1 cut(s)	921
BaeGI	GKGCMC	1 cut(s)	1327
BarI	GAAGNNNNNNTAC	2 cut(s)	275, 307
BauI	CACGAG	1 cut(s)	1409
BbsI	GAAGAC	2 cut(s)	432, 1314
BbvI	GCAGC	2 cut(s)	1267, 1476
BccI	CCATC	4 cut(s)	772, 937, 995, 1367
BcgI	CGANNNNNNTGC	2 cut(s)	1343, 1377
BclI	TGATCA	1 cut(s)	1132
BcnI	CCSGG	2 cut(s)	674, 675
BcoDI	GTCTC	1 cut(s)	1064
BfaI	CTAG	2 cut(s)	306, 824
BfmI	CTRYAG	3 cut(s)	477, 624, 870
BfoI	RGCGCY	1 cut(s)	909
BisI	GCNGC	2 cut(s)	1256, 1465
BlsI	GCNGC	2 cut(s)	1257, 1466
Bme1390I	CCNGG	2 cut(s)	674, 675
Bme18I	GGWCC	1 cut(s)	797
BmeRI	GACNNNNNGTC	1 cut(s)	1201
BmeT110I	CYCGRG	1 cut(s)	673
BmgT120I	GGNCC	3 cut(s)	758, 797, 820
BmiI	GGNNCC	2 cut(s)	760, 856
BmrFI	CCNGG	2 cut(s)	674, 675
BmsI	GCATC	4 cut(s)	424, 1175, 1261, 1476
BpiI	GAAGAC	2 cut(s)	432, 1314
BpmI	CTGGAG	1 cut(s)	74
Bpu10I	CCTNAGC	1 cut(s)	828
Bpu14I	TTCGAA	1 cut(s)	987
BpuEI	CTTGAG	1 cut(s)	125
BpuMI	CCSGG	2 cut(s)	674, 675
BsaAI	YACGTR	1 cut(s)	1017
BsaHI	GRCGYC	1 cut(s)	394
BsaI	GGTCTC	1 cut(s)	1064
BsaJI	CCNNGG	2 cut(s)	673, 674
Bsc4I	CCNNNNNNNGG	3 cut(s)	768, 829, 1162
Bse21I	CCTNAGG	1 cut(s)	921
BseDI	CCNNGG	2 cut(s)	673, 674
BseGI	GGATG	3 cut(s)	1006, 1384, 1467
BseLI	CCNNNNNNNGG	3 cut(s)	768, 829, 1162
BseMII	CTCAG	4 cut(s)	75, 403, 842, 1113
BseSI	GKGCMC	1 cut(s)	1327
BseXI	GCAGC	2 cut(s)	1267, 1476
Bsh1236I	CGCG	1 cut(s)	146
BshFI	GGCC	3 cut(s)	554, 759, 822
BsiHKCI	CYCGRG	1 cut(s)	673
BsiSI	CCGG	3 cut(s)	674, 756, 1252
BslI	CCNNNNNNNGG	3 cut(s)	768, 829, 1162
BsmAI	GTCTC	1 cut(s)	1064
BsmI	GAATGC	1 cut(s)	1123
BsnI	GGCC	3 cut(s)	554, 759, 822
Bso31I	GGTCTC	1 cut(s)	1064
BsoBI	CYCGRG	1 cut(s)	673
Bsp119I	TTCGAA	1 cut(s)	987
Bsp1286I	GDGCHC	1 cut(s)	1327
Bsp1407I	TGTACA	1 cut(s)	1378
Bsp143I	GATC	6 cut(s)	76, 100, 365, 473, 574, 1132
BspACI	CCGC	2 cut(s)	146, 1462
BspANI	GGCC	3 cut(s)	554, 759, 822
BspCNI	CTCAG	4 cut(s)	76, 402, 841, 1114
BspFNI	CGCG	1 cut(s)	146
BspHI	TCATGA	2 cut(s)	187, 274
BspLI	GGNNCC	2 cut(s)	760, 856
BspMAI	CTGCAG	1 cut(s)	481
BspPI	GGATC	2 cut(s)	71, 481
BspT104I	TTCGAA	1 cut(s)	987
BspTNI	GGTCTC	1 cut(s)	1064
BsrGI	TGTACA	1 cut(s)	1378
BssECI	CCNNGG	2 cut(s)	673, 674
BssMI	GATC	6 cut(s)	76, 100, 365, 473, 574, 1132
BssNI	GRCGYC	1 cut(s)	394
BssSI	CACGAG	1 cut(s)	1409
Bst2BI	CACGAG	1 cut(s)	1409
Bst4CI	ACNGT	5 cut(s)	217, 604, 1160, 1185, 1426
Bst6I	CTCTTC	3 cut(s)	339, 942, 1001
BstACI	GRCGYC	1 cut(s)	394
BstAUI	TGTACA	1 cut(s)	1378
BstBAI	YACGTR	1 cut(s)	1017
BstBI	TTCGAA	1 cut(s)	987
BstC8I	GCNNGC	1 cut(s)	556
BstDEI	CTNAG	5 cut(s)	84, 389, 828, 921, 1122
BstENI	CCTNNNNNAGG	1 cut(s)	827
BstF5I	GGATG	3 cut(s)	1006, 1384, 1467
BstFNI	CGCG	1 cut(s)	146
BstH2I	RGCGCY	1 cut(s)	909
BstHHI	GCGC	1 cut(s)	908
BstKTI	GATC	6 cut(s)	79, 103, 368, 476, 577, 1135
BstMAI	GTCTC	1 cut(s)	1064
BstMBI	GATC	6 cut(s)	76, 100, 365, 473, 574, 1132
BstMWI	GCNNNNNNNGC	1 cut(s)	64
BstNSI	RCATGY	3 cut(s)	32, 67, 172
BstSCI	CCNGG	2 cut(s)	672, 673
BstSFI	CTRYAG	3 cut(s)	477, 624, 870
BstSLI	GKGCMC	1 cut(s)	1327
BstUI	CGCG	1 cut(s)	146
BstV1I	GCAGC	2 cut(s)	1267, 1476
BstV2I	GAAGAC	2 cut(s)	432, 1314
BstX2I	RGATCY	1 cut(s)	473
BstXI	CCANNNNNNTGG	2 cut(s)	517, 1081
BstYI	RGATCY	1 cut(s)	473
Bsu36I	CCTNAGG	1 cut(s)	921
BsuRI	GGCC	3 cut(s)	554, 759, 822
BtsCI	GGATG	3 cut(s)	1006, 1384, 1467
BtsIMutI	CAGTG	5 cut(s)	79, 495, 600, 1181, 1246
Cac8I	GCNNGC	1 cut(s)	556
CaiI	CAGNNNCTG	1 cut(s)	25
CciI	TCATGA	2 cut(s)	187, 274
CfoI	GCGC	1 cut(s)	908
Cfr13I	GGNCC	3 cut(s)	758, 797, 820
Cfr9I	CCCGGG	1 cut(s)	673
Csp6I	GTAC	4 cut(s)	292, 611, 1379, 1478
CspCI	CAANNNNNGTGG	2 cut(s)	946, 981
CviQI	GTAC	4 cut(s)	292, 611, 1379, 1478
DdeI	CTNAG	5 cut(s)	84, 389, 828, 921, 1122
DpnI	GATC	6 cut(s)	78, 102, 367, 475, 576, 1134
DpnII	GATC	6 cut(s)	76, 100, 365, 473, 574, 1132
DraI	TTTAAA	1 cut(s)	865
DriI	GACNNNNNGTC	1 cut(s)	1201
Eam1104I	CTCTTC	3 cut(s)	339, 942, 1001
Eam1105I	GACNNNNNGTC	1 cut(s)	1201
EarI	CTCTTC	3 cut(s)	339, 942, 1001
Eco31I	GGTCTC	1 cut(s)	1064
Eco47I	GGWCC	1 cut(s)	797
Eco47III	AGCGCT	1 cut(s)	907
Eco57I	CTGAAG	1 cut(s)	1323
Eco81I	CCTNAGG	1 cut(s)	921
Eco88I	CYCGRG	1 cut(s)	673
EcoNI	CCTNNNNNAGG	1 cut(s)	827
EcoO109I	RGGNCCY	1 cut(s)	820
EcoRI	GAATTC	2 cut(s)	230, 533
FauI	CCCGC	2 cut(s)	139, 1469
FauNDI	CATATG	1 cut(s)	1356
FbaI	TGATCA	1 cut(s)	1132
FblI	GTMKAC	1 cut(s)	219
Fnu4HI	GCNGC	2 cut(s)	1256, 1465
FokI	GGATG	3 cut(s)	1013, 1371, 1454
Fsp4HI	GCNGC	2 cut(s)	1256, 1465
FspBI	CTAG	2 cut(s)	306, 824
GlaI	GCGC	1 cut(s)	907
GluI	GCNGC	2 cut(s)	1256, 1465
GsuI	CTGGAG	1 cut(s)	74
HaeII	RGCGCY	1 cut(s)	909
HaeIII	GGCC	3 cut(s)	554, 759, 822
HapII	CCGG	3 cut(s)	674, 756, 1252
HhaI	GCGC	1 cut(s)	908
Hin1I	GRCGYC	1 cut(s)	394
Hin6I	GCGC	1 cut(s)	906
HinP1I	GCGC	1 cut(s)	906
HinfI	GANTC	5 cut(s)	265, 630, 1052, 1236, 1310
HpaII	CCGG	3 cut(s)	674, 756, 1252
HphI	GGTGA	2 cut(s)	602, 1205
Hpy166II	GTNNAC	4 cut(s)	220, 386, 1367, 1379
Hpy188I	TCNGA	7 cut(s)	370, 392, 574, 811, 982, 1303, 1502
Hpy8I	GTNNAC	4 cut(s)	220, 386, 1367, 1379
HpyAV	CCTTC	7 cut(s)	464, 544, 691, 716, 811, 987, 1398
HpyCH4III	ACNGT	5 cut(s)	217, 604, 1160, 1185, 1426
HpyCH4IV	ACGT	3 cut(s)	382, 394, 1016
HpyCH4V	TGCA	8 cut(s)	28, 67, 197, 479, 654, 914, 1032, 1354
HpyF10VI	GCNNNNNNNGC	1 cut(s)	64
HpyF3I	CTNAG	5 cut(s)	84, 389, 828, 921, 1122
HpySE526I	ACGT	3 cut(s)	382, 394, 1016
Hsp92I	GRCGYC	1 cut(s)	394
HspAI	GCGC	1 cut(s)	906
Ksp22I	TGATCA	1 cut(s)	1132
Kzo9I	GATC	6 cut(s)	76, 100, 365, 473, 574, 1132
LmnI	GCTCC	2 cut(s)	55, 335
Lsp1109I	GCAGC	2 cut(s)	1267, 1476
LweI	GCATC	4 cut(s)	424, 1175, 1261, 1476
MaeI	CTAG	2 cut(s)	306, 824
MaeII	ACGT	3 cut(s)	382, 394, 1016
MaeIII	GTNAC	2 cut(s)	1193, 1453
MalI	GATC	6 cut(s)	78, 102, 367, 475, 576, 1134
MboI	GATC	6 cut(s)	76, 100, 365, 473, 574, 1132
MfeI	CAATTG	2 cut(s)	198, 465
MflI	RGATCY	1 cut(s)	473
MhlI	GDGCHC	1 cut(s)	1327
MlyI	GAGTC	1 cut(s)	1304
MnlI	CCTC	8 cut(s)	36, 90, 184, 415, 454, 817, 1337, 1371
MroXI	GAANNNNTTC	3 cut(s)	230, 353, 1425
MseI	TTAA	4 cut(s)	93, 453, 708, 864
MslI	CAYNNNNRTG	1 cut(s)	192
MspI	CCGG	3 cut(s)	674, 756, 1252
MspR9I	CCNGG	2 cut(s)	674, 675
MunI	CAATTG	2 cut(s)	198, 465
Mva1269I	GAATGC	1 cut(s)	1123
MvnI	CGCG	1 cut(s)	146
MwoI	GCNNNNNNNGC	1 cut(s)	64
NciI	CCSGG	2 cut(s)	674, 675
NdeI	CATATG	1 cut(s)	1356
NdeII	GATC	6 cut(s)	76, 100, 365, 473, 574, 1132
NlaIV	GGNNCC	2 cut(s)	760, 856
NmuCI	GTSAC	2 cut(s)	1193, 1453
NspI	RCATGY	3 cut(s)	32, 67, 172
NspV	TTCGAA	1 cut(s)	987
PagI	TCATGA	2 cut(s)	187, 274
PctI	GAATGC	1 cut(s)	1123
PdmI	GAANNNNTTC	3 cut(s)	230, 353, 1425
PfeI	GAWTC	4 cut(s)	265, 630, 1052, 1236
PflFI	GACNNNGTC	1 cut(s)	1313
PflMI	CCANNNNNTGG	1 cut(s)	1162
PkrI	GCNGC	2 cut(s)	1257, 1466
PleI	GAGTC	1 cut(s)	1304
PpsI	GAGTC	1 cut(s)	1304
Ppu21I	YACGTR	1 cut(s)	1017
PspN4I	GGNNCC	2 cut(s)	760, 856
PspPI	GGNCC	3 cut(s)	758, 797, 820
PstI	CTGCAG	1 cut(s)	481
PstNI	CAGNNNCTG	1 cut(s)	25
PsuI	RGATCY	1 cut(s)	473
PsyI	GACNNNGTC	1 cut(s)	1313
RsaI	GTAC	4 cut(s)	293, 612, 1380, 1479
RsaNI	GTAC	4 cut(s)	292, 611, 1379, 1478
RseI	CAYNNNNRTG	1 cut(s)	192
SaqAI	TTAA	4 cut(s)	93, 453, 708, 864
SatI	GCNGC	2 cut(s)	1256, 1465
Sau3AI	GATC	6 cut(s)	76, 100, 365, 473, 574, 1132
Sau96I	GGNCC	3 cut(s)	758, 797, 820
SchI	GAGTC	1 cut(s)	1304
ScrFI	CCNGG	2 cut(s)	674, 675
SduI	GDGCHC	1 cut(s)	1327
SfaNI	GCATC	4 cut(s)	424, 1175, 1261, 1476
SfcI	CTRYAG	3 cut(s)	477, 624, 870
SfuI	TTCGAA	1 cut(s)	987
SinI	GGWCC	1 cut(s)	797
SmaI	CCCGGG	1 cut(s)	675
SmiMI	CAYNNNNRTG	1 cut(s)	192
SmlI	CTYRAG	1 cut(s)	104
SmoI	CTYRAG	1 cut(s)	104
SsiI	CCGC	2 cut(s)	146, 1462
SspI	AATATT	2 cut(s)	241, 354
SspMI	CTAG	2 cut(s)	306, 824
StyD4I	CCNGG	2 cut(s)	672, 673
TaaI	ACNGT	5 cut(s)	217, 604, 1160, 1185, 1426
TaiI	ACGT	3 cut(s)	385, 397, 1019
TaqI	TCGA	2 cut(s)	459, 987
TatI	WGTACW	2 cut(s)	1378, 1477
TfiI	GAWTC	4 cut(s)	265, 630, 1052, 1236
Tru1I	TTAA	4 cut(s)	93, 453, 708, 864
Tru9I	TTAA	4 cut(s)	93, 453, 708, 864
TscAI	CASTG	5 cut(s)	79, 495, 607, 1188, 1246
TseFI	GTSAC	2 cut(s)	1193, 1453
TseI	GCWGC	2 cut(s)	1255, 1464
Tsp45I	GTSAC	2 cut(s)	1193, 1453
TspGWI	ACGGA	1 cut(s)	1485
TspMI	CCCGGG	1 cut(s)	673
TspRI	CASTG	5 cut(s)	79, 495, 607, 1188, 1246
Tth111I	GACNNNGTC	1 cut(s)	1313
Van91I	CCANNNNNTGG	1 cut(s)	1162
VpaK11BI	GGWCC	1 cut(s)	797
XagI	CCTNNNNNAGG	1 cut(s)	827
XapI	RAATTY	5 cut(s)	183, 230, 317, 533, 656
XbaI	TCTAGA	1 cut(s)	305
XceI	RCATGY	3 cut(s)	32, 67, 172
XcmI	CCANNNNNNNNNTGG	1 cut(s)	771
XmaI	CCCGGG	1 cut(s)	673
XmiI	GTMKAC	1 cut(s)	219
XmnI	GAANNNNTTC	3 cut(s)	230, 353, 1425
XspI	CTAG	2 cut(s)	306, 824
ZraI	GACGTC	1 cut(s)	395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.