RchiOBHm_Chr6g0301101

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0002531
Physical Location & Seq
Reverse (-)
61649089 .. 61653949
4861 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27041

Sequence Viewer

Length: 2721 bp
ATGAAGATGTACAGTACGTTATCACATACTAAAACCCAAGTTGGCGTCTTTACAATAGCACTAGCTTTGTTCTCCATTAACTGCGTTTTTGCCCAGAAAGGTTCTTTAAGCTCCGCCGTAGAACGGTCGGCGTTACTGAACCTCCGGTCCTCTTTAGGAATCAGAAGCCGATACTGGCCCAGAAGGGCAGACCCTTGTTCTCGCTGGACCGGAGTGGAATGCCGGACCGGCCGTGTCATTGGAATCACAGTCTCCGGTTTGAGACGGACCACCGTCGGGCGGCGCAACCCCCAGTTCGCCGTGGATTCTTTAGCCAATTTTACATTCTTGGCTACTTTTAATGCTTCTGGGTTTTCGCTTCCGGGGTCTATACCGGACTGGTTTGGCCAGAGACTTGGTTCGCTCCAAGTGCTTGATCTAAGGTCTGCTTCTGTCATTGGTGCTATACCTGAGTCACTTAGTAATTTGACAAAGCTTAAGTCTTTGCATTTATCTGGTAATGATATTACTGGTATTGTGCCTTCTGCATTGGGGAACTTGGTTGGCTTGGAGGTTCTTGATGTTTCGAGGAATTCGTTTACTGGGTCCATACCTTCTGCTTTTGCCTCTCTTGGAAATCTTACAATGCTTGACCTTTCTTCAAATTTCCTATCCGGGCCAATTCCACCGGGTTTAGGCACCCTTTCGAGACTTAAGTTCCTGAACCTGTCTGATAATAGTCTCACTGATTCCATACCGGTTCAGCTTGGCAAGCTTTCCCAGTTGCTCGGACTTGACTTTAGCAAGAACTCTTTGTCTGGGACATTGCCTGTGGAGTTGAGAGGGTTGAGGAGAGTGACGAAAATGGAGATTGAACATAATGATCTGGAAGGTTCACTGCCAGAGGGTTTGATTTCGAGTCTTGCTGAGCTGGAAGTTCTAGTTCTGAGTAGGAATAGACTTGGGGGTGCTCTTCCTAGTGCATTGTGGTCACTTCCCAGTTTGCGGTTTGTTGATTTATCCAGCAACAATTTTACAGGACCTCTGCCGAGCATCAGTACAAATGGTAGTTTTAGCAGAGCTGTGTTCAACCTCTCTGATAATCTTCTGTATGGAAATCTGACTTATCCTCTTGTGAAATTTGGCTCCATTGACTTGTCTGGGAACTTTTTTCAAGGCAAGGTATTGACAGATAATCAAAGCAATGCTACTCTTACTACAAATTGCCTCCAGTTGGTACCAAAACAGAGGAGCTTACAGGAATGTAGACAGTTTTATGAAGAAAGGAGTTTAGCTTTTGATGATTCTGGGGTACCTGGACCAGCCCAGCCACCGTTTCTAGAACGTGACTCGAAGAGCACAAATCGATTAATATATATACTGGTTGGAATATTTGGTGGACTAGGCTTCATTCTGATTTTGGTAGTGGTTCTGGCAATGCTCCTGAAAAAGGGTAATAAAGCCACAAGTCAACGAGGAAGTGCAAATGTAGGGCCTGTTCCAGATGGAGACGGCCTTTCACTCCCTAAAGATCCCATGTATGCAACTGGCCTAGGAGATCCATTTACATATGGGCAGATTCGCCAGATTGCTGGTGATTTTGGTGAAGAAAGTCTTATCAAACATGGACACTCTGGGGACATATTTCACGGTTCCTTGGTAAGTGGAACCCCTGTAGTTATCAAAAGGGTAGATCTGCATTCCTTCACGAAAGAATCATATATGATAGAAATGGATTTATTCAGCAAACTTTCACACACAAGATTGATCCCCCTTCTGGGGCATTGCTTGGAGCATGAGAGTGAGAAGCTTCTGGTTTACAAATATATGCCAAATGGAGACTTGGCTAGTTCCTTGCATAGAGTTGCAAATTCAGCCGATGGCAAATTACAGTCTTTGGATTGGATTACAAGACTAAAAATTGCAATTGGAGCTGCTGAAGTCCTAGCTTACTTACATCATGAGTGCAGCCCACCTCTTGTTCACAGAGATGTTCAAGCAAGCAGTATACTTCTGGATGACAAATTTGAGGTACGACTTGGAAGCTTGAGTGAGGTCCGTGCGCAAGAAGGGGATGCTAACCAAAATGTAATCACAAGATTGTTGCGGAAACAGCAAAGTTCTGAACAAAGCCCTTCTGCCCCGACGTCATCGGTGACTTGTGCTTACGATGTGTACTGTTTCGGTAAGGTTTTGCTTGAGCTTGTGACAGGCAAGCTCGGTATCAGCAAATCAGATGATGCCTCTACAAGAGAGTGGCTGGATCACACAGTGCGTTACATCAGCATATTTGAGATGGAACTGGTGAGTAAGATTGTTGACCCATCTCTAATAGTAGATGAGGATCTATTGGAAGAAGTGTGGGCCATGGCAATCGTGGCCAGGTCCTGCCTTAACCCCAAGCCTTCCAAGCGTCCGCCCATGAAATACATCCTTAAAGCATTGGAAAACCCTCTAAAGGTGGTGAGGGAAGAGAGTTCGAGCTCTGCAAGGCTGCGGACAACTTCATCTAGAAGATCATGGAGCACTGCTTTCTTTGGTAGCTGGCGGCACAGCTCATCAGAGAATGCCACTGTTCCTGGCCATACAAACAGAGAGAGTATCAGTGGCTTAAAACAGGCAGGGCGAGCAGGTTCTCACGGCAGTGGTGGAAATGAGTTCTCTTCACGTAAAAGGTTGTCCAATGAAATTTTCCCTGAGCCAATCGAAATACAAGATGTTGAGAGGCCAGAAGAACAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0009505 GO:0009506 GO:0016020 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

906

Amino Acids

98.77

Weight (kDa)

8.5

Isoelectric Point (pI)

45.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 131 - 210 4e-08 Leucine-rich repeat region
LRR_8 PF13855 158 - 215 1.3e-12 Leucine rich repeat
LRR_14 PF23598 224 - 330 4.7e-06 Leucine-rich repeat region
LRR_8 PF13855 230 - 289 7.6e-06 Leucine rich repeat
LRR_8 PF13855 292 - 338 9.7e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 533 - 807 1.2e-21 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 533 - 806 5.5e-14 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2129
Acc16I TGCGCA 1 cut(s) 2043
Acc36I ACCTGC 1 cut(s) 2600
Acc65I GGTACC 2 cut(s) 1216, 1291
AccB1I GGYRCC 3 cut(s) 677, 1216, 1291
AccI GTMKAC 2 cut(s) 1246, 1987
AciI CCGC 7 cut(s) 114, 280, 985, 2086, 2396, 2476, 2527
AclWI GGATC 5 cut(s) 1505, 1532, 1741, 2250, 2331
AcoI YGGCCR 4 cut(s) 229, 385, 2358, 2560
AcsI RAATTY 6 cut(s) 571, 643, 1118, 1849, 2003, 2667
AcuI CTGAAG 1 cut(s) 1938
AcyI GRCGYC 2 cut(s) 45, 2126
AdeI CACNNNGTG 1 cut(s) 2251
AfaI GTAC 7 cut(s) 11, 16, 1039, 1218, 1293, 2013, 2156
AflII CTTAAG 2 cut(s) 476, 692
AgeI ACCGGT 1 cut(s) 736
AgsI TTSAA 5 cut(s) 642, 854, 1069, 1154, 1976
AjnI CCWGG 3 cut(s) 1294, 2360, 2557
AjuI GAANNNNNNNTTGG 4 cut(s) 308, 340, 2654, 2686
AleI CACNNNNGTG 1 cut(s) 2622
AloI GAACNNNNNNTCC 2 cut(s) 131, 163
Alw21I GWGCWC 4 cut(s) 952, 1340, 2465, 2507
Alw26I GTCTC 7 cut(s) 256, 256, 385, 682, 725, 1482, 1812
AlwI GGATC 5 cut(s) 1505, 1532, 1741, 2250, 2331
AlwNI CAGNNNCTG 1 cut(s) 2367
ApeKI GCWGC 3 cut(s) 1913, 1947, 2473
ApoI RAATTY 6 cut(s) 571, 643, 1118, 1849, 2003, 2667
ArsI GACNNNNNNTTYG 2 cut(s) 464, 496
AseI ATTAAT 1 cut(s) 1349
AsiGI ACCGGT 1 cut(s) 736
Asp718I GGTACC 2 cut(s) 1216, 1291
AspA2I CCTAGG 1 cut(s) 1531
AspLEI GCGC 2 cut(s) 285, 2044
AsuC2I CCSGG 3 cut(s) 363, 655, 669
AsuHPI GGTGA 5 cut(s) 1586, 1595, 2146, 2296, 2455
AvaII GGWCC 9 cut(s) 147, 207, 225, 267, 585, 1019, 1298, 2035, 2364
AvrII CCTAGG 1 cut(s) 1531
BalI TGGCCA 3 cut(s) 387, 2360, 2562
BanI GGYRCC 3 cut(s) 677, 1216, 1291
BanII GRGCYC 1 cut(s) 2465
BarI GAAGNNNNNNTAC 2 cut(s) 505, 537
Bbv12I GWGCWC 4 cut(s) 952, 1340, 2465, 2507
BbvI GCAGC 3 cut(s) 1900, 1959, 2460
BccI CCATC 4 cut(s) 1478, 1853, 2269, 2311
BceAI ACGGC 5 cut(s) 101, 216, 284, 1507, 2635
BciT130I CCWGG 3 cut(s) 1296, 2362, 2559
BcnI CCSGG 3 cut(s) 363, 655, 669
BcoDI GTCTC 7 cut(s) 256, 256, 385, 682, 725, 1482, 1812
BfaI CTAG 9 cut(s) 62, 920, 957, 1319, 1382, 1532, 1827, 1925, 2490
BfmI CTRYAG 1 cut(s) 1653
BfrI CTTAAG 2 cut(s) 476, 692
BfuAI ACCTGC 1 cut(s) 2600
BglI GCCNNNNNGGC 1 cut(s) 228
BglII AGATCT 1 cut(s) 1672
BisI GCNGC 5 cut(s) 281, 1914, 1948, 2474, 2528
BlnI CCTAGG 1 cut(s) 1531
BlpI GCTNAGC 1 cut(s) 906
BlsI GCNGC 5 cut(s) 282, 1915, 1949, 2475, 2529
Bme1390I CCNGG 6 cut(s) 363, 655, 669, 1296, 2362, 2559
Bme18I GGWCC 9 cut(s) 147, 207, 225, 267, 585, 1019, 1298, 2035, 2364
BmiI GGNNCC 7 cut(s) 586, 679, 1126, 1218, 1293, 1633, 1648
BmrFI CCNGG 6 cut(s) 363, 655, 669, 1296, 2362, 2559
BmrI ACTGGG 4 cut(s) 286, 591, 754, 972
BmsI GCATC 3 cut(s) 1041, 2044, 2209
BmuI ACTGGG 4 cut(s) 286, 591, 754, 972
BoxI GACNNNNGTC 1 cut(s) 272
BpmI CTGGAG 1 cut(s) 1193
Bpu10I CCTNAGC 1 cut(s) 2676
Bpu1102I GCTNAGC 1 cut(s) 906
BpuEI CTTGAG 2 cut(s) 2047, 2198
BpuMI CCSGG 3 cut(s) 363, 655, 669
Bsa29I ATCGAT 1 cut(s) 1345
BsaAI YACGTR 1 cut(s) 2648
BsaBI GATNNNNATC 1 cut(s) 2322
BsaHI GRCGYC 2 cut(s) 45, 2126
BsaJI CCNNGG 5 cut(s) 300, 362, 1531, 1635, 2346
BsaWI WCCGGW 5 cut(s) 144, 209, 254, 373, 736
BsaXI ACNNNNNCTCC 2 cut(s) 126, 156
Bse118I RCCGGY 2 cut(s) 227, 736
Bse3DI GCAATG 4 cut(s) 803, 1189, 1422, 1762
Bse8I GATNNNNATC 1 cut(s) 2322
BseBI CCWGG 3 cut(s) 1296, 2362, 2559
BseCI ATCGAT 1 cut(s) 1345
BseDI CCNNGG 5 cut(s) 300, 362, 1531, 1635, 2346
BseGI GGATG 3 cut(s) 2002, 2059, 2409
BseJI GATNNNNATC 1 cut(s) 2322
BseMI GCAATG 4 cut(s) 803, 1189, 1422, 1762
BseMII CTCAG 4 cut(s) 441, 897, 917, 2667
BseRI GAGGAG 2 cut(s) 844, 1243
BseX3I CGGCCG 1 cut(s) 229
BseXI GCAGC 3 cut(s) 1900, 1959, 2460
BseYI CCCAGC 1 cut(s) 1305
BsgI GTGCAG 1 cut(s) 1966
Bsh1285I CGRYCG 2 cut(s) 128, 232
BshNI GGYRCC 3 cut(s) 677, 1216, 1291
BshTI ACCGGT 1 cut(s) 736
BshVI ATCGAT 1 cut(s) 1345
BsiEI CGRYCG 2 cut(s) 128, 232
BsiHKAI GWGCWC 4 cut(s) 952, 1340, 2465, 2507
BslFI GGGAC 2 cut(s) 814, 1631
BsmAI GTCTC 7 cut(s) 256, 256, 385, 682, 725, 1482, 1812
BsmBI CGTCTC 2 cut(s) 256, 1482
BsmFI GGGAC 2 cut(s) 814, 1631
BsmI GAATGC 3 cut(s) 224, 1678, 2551
Bsp1286I GDGCHC 4 cut(s) 952, 1340, 2465, 2507
Bsp1407I TGTACA 1 cut(s) 9
Bsp143I GATC 9 cut(s) 415, 862, 1510, 1537, 1672, 1746, 2242, 2323, 2495
Bsp1720I GCTNAGC 1 cut(s) 906
Bsp19I CCATGG 1 cut(s) 2346
BspACI CCGC 7 cut(s) 114, 280, 985, 2086, 2396, 2476, 2527
BspCNI CTCAG 4 cut(s) 442, 898, 918, 2668
BspDI ATCGAT 1 cut(s) 1345
BspHI TCATGA 1 cut(s) 1939
BspLI GGNNCC 7 cut(s) 586, 679, 1126, 1218, 1293, 1633, 1648
BspMI ACCTGC 1 cut(s) 2600
BspPI GGATC 5 cut(s) 1505, 1532, 1741, 2250, 2331
BspQI GCTCTTC 2 cut(s) 957, 1328
BspT107I GGYRCC 3 cut(s) 677, 1216, 1291
BspTI CTTAAG 2 cut(s) 476, 692
BsrDI GCAATG 4 cut(s) 803, 1189, 1422, 1762
BsrFI RCCGGY 2 cut(s) 227, 736
BsrGI TGTACA 1 cut(s) 9
BssAI RCCGGY 2 cut(s) 227, 736
BssECI CCNNGG 5 cut(s) 300, 362, 1531, 1635, 2346
BssMI GATC 9 cut(s) 415, 862, 1510, 1537, 1672, 1746, 2242, 2323, 2495
BssNAI GTATAC 1 cut(s) 1988
BssNI GRCGYC 2 cut(s) 45, 2126
BssT1I CCWWGG 3 cut(s) 1531, 1635, 2346
Bst1107I GTATAC 1 cut(s) 1988
Bst2UI CCWGG 3 cut(s) 1296, 2362, 2559
Bst6I CTCTTC 4 cut(s) 957, 1328, 2445, 2647
BstACI GRCGYC 2 cut(s) 45, 2126
BstAFI CTTAAG 2 cut(s) 476, 692
BstAUI TGTACA 1 cut(s) 9
BstBAI YACGTR 1 cut(s) 2648
BstC8I GCNNGC 5 cut(s) 752, 1981, 2195, 2525, 2607
BstDEI CTNAG 6 cut(s) 419, 450, 458, 906, 926, 2676
BstDSI CCRYGG 2 cut(s) 300, 2346
BstENI CCTNNNNNAGG 1 cut(s) 1427
BstF5I GGATG 3 cut(s) 2002, 2059, 2409
BstHHI GCGC 2 cut(s) 285, 2044
BstKTI GATC 9 cut(s) 418, 865, 1513, 1540, 1675, 1749, 2245, 2326, 2498
BstMAI GTCTC 7 cut(s) 256, 256, 385, 682, 725, 1482, 1812
BstMBI GATC 9 cut(s) 415, 862, 1510, 1537, 1672, 1746, 2242, 2323, 2495
BstMCI CGRYCG 2 cut(s) 128, 232
BstMWI GCNNNNNNNGC 9 cut(s) 228, 409, 751, 1853, 1910, 2092, 2357, 2389, 2606
BstNI CCWGG 3 cut(s) 1296, 2362, 2559
BstPAI GACNNNNGTC 1 cut(s) 272
BstSCI CCNGG 6 cut(s) 361, 653, 667, 1294, 2360, 2557
BstSFI CTRYAG 1 cut(s) 1653
BstV1I GCAGC 3 cut(s) 1900, 1959, 2460
BstX2I RGATCY 4 cut(s) 1510, 1537, 1672, 2323
BstXI CCANNNNNNTGG 2 cut(s) 395, 1571
BstYI RGATCY 4 cut(s) 1510, 1537, 1672, 2323
BstZ17I GTATAC 1 cut(s) 1988
BstZI CGGCCG 1 cut(s) 229
Bsu15I ATCGAT 1 cut(s) 1345
BsuTUI ATCGAT 1 cut(s) 1345
BtgI CCRYGG 2 cut(s) 300, 2346
BtsCI GGATG 3 cut(s) 2002, 2059, 2409
BtsI GCAGTG 3 cut(s) 875, 2505, 2629
BtsIMutI CAGTG 7 cut(s) 723, 875, 2256, 2505, 2550, 2590, 2629
BveI ACCTGC 1 cut(s) 2600
Cac8I GCNNGC 5 cut(s) 752, 1981, 2195, 2525, 2607
CaiI CAGNNNCTG 1 cut(s) 2367
CciI TCATGA 1 cut(s) 1939
CfoI GCGC 2 cut(s) 285, 2044
Cfr10I RCCGGY 2 cut(s) 227, 736
ClaI ATCGAT 1 cut(s) 1345
CpoI CGGWCCG 1 cut(s) 225
CseI GACGC 2 cut(s) 34, 2381
Csp6I GTAC 7 cut(s) 10, 15, 1038, 1217, 1292, 2012, 2155
CspAI ACCGGT 1 cut(s) 736
CspI CGGWCCG 1 cut(s) 225
CviAII CATG 7 cut(s) 1516, 1604, 1775, 1940, 2347, 2401, 2499
CviQI GTAC 7 cut(s) 10, 15, 1038, 1217, 1292, 2012, 2155
DdeI CTNAG 6 cut(s) 419, 450, 458, 906, 926, 2676
DpnI GATC 9 cut(s) 417, 864, 1512, 1539, 1674, 1748, 2244, 2325, 2497
DpnII GATC 9 cut(s) 415, 862, 1510, 1537, 1672, 1746, 2242, 2323, 2495
DraIII CACNNNGTG 1 cut(s) 2251
EaeI YGGCCR 4 cut(s) 229, 385, 2358, 2560
EagI CGGCCG 1 cut(s) 229
Eam1104I CTCTTC 4 cut(s) 957, 1328, 2445, 2647
EarI CTCTTC 4 cut(s) 957, 1328, 2445, 2647
EciI GGCGGA 2 cut(s) 103, 2385
Ecl136II GAGCTC 1 cut(s) 2463
EclXI CGGCCG 1 cut(s) 229
Eco130I CCWWGG 3 cut(s) 1531, 1635, 2346
Eco24I GRGCYC 1 cut(s) 2465
Eco47I GGWCC 9 cut(s) 147, 207, 225, 267, 585, 1019, 1298, 2035, 2364
Eco52I CGGCCG 1 cut(s) 229
Eco53kI GAGCTC 1 cut(s) 2463
Eco57I CTGAAG 1 cut(s) 1938
EcoICRI GAGCTC 1 cut(s) 2463
EcoNI CCTNNNNNAGG 1 cut(s) 1427
EcoO109I RGGNCCY 3 cut(s) 1019, 1472, 2364
EcoRI GAATTC 1 cut(s) 571
EcoRII CCWGG 3 cut(s) 1294, 2360, 2557
EcoT14I CCWWGG 3 cut(s) 1531, 1635, 2346
EcoT38I GRGCYC 1 cut(s) 2465
ErhI CCWWGG 3 cut(s) 1531, 1635, 2346
Esp3I CGTCTC 2 cut(s) 256, 1482
FaeI CATG 7 cut(s) 1519, 1607, 1778, 1943, 2350, 2404, 2502
FalI AAGNNNNNCTT 4 cut(s) 412, 444, 1578, 1610
FaqI GGGAC 2 cut(s) 814, 1631
FatI CATG 7 cut(s) 1515, 1603, 1774, 1939, 2346, 2400, 2498
FauNDI CATATG 1 cut(s) 1549
FblI GTMKAC 2 cut(s) 1246, 1987
Fnu4HI GCNGC 5 cut(s) 281, 1914, 1948, 2474, 2528
FokI GGATG 3 cut(s) 2009, 2066, 2396
FriOI GRGCYC 1 cut(s) 2465
Fsp4HI GCNGC 5 cut(s) 281, 1914, 1948, 2474, 2528
FspBI CTAG 9 cut(s) 62, 920, 957, 1319, 1382, 1532, 1827, 1925, 2490
FspI TGCGCA 1 cut(s) 2043
GlaI GCGC 2 cut(s) 284, 2043
GluI GCNGC 5 cut(s) 281, 1914, 1948, 2474, 2528
GsaI CCCAGC 1 cut(s) 1309
GsuI CTGGAG 1 cut(s) 1193
HgaI GACGC 2 cut(s) 34, 2381
HhaI GCGC 2 cut(s) 285, 2044
Hin1I GRCGYC 2 cut(s) 45, 2126
Hin1II CATG 7 cut(s) 1519, 1607, 1778, 1943, 2350, 2404, 2502
Hin6I GCGC 2 cut(s) 283, 2042
HinP1I GCGC 2 cut(s) 283, 2042
HincII GTYRAC 2 cut(s) 1451, 2299
HindII GTYRAC 2 cut(s) 1451, 2299
HindIII AAGCTT 4 cut(s) 473, 752, 1787, 2023
HphI GGTGA 5 cut(s) 1586, 1595, 2146, 2296, 2455
Hpy99I CGWCG 2 cut(s) 278, 2128
HpyAV CCTTC 9 cut(s) 177, 531, 603, 863, 1693, 1763, 2042, 2124, 2394
HpyCH4IV ACGT 4 cut(s) 17, 1324, 2126, 2647
HpyF10VI GCNNNNNNNGC 9 cut(s) 228, 409, 751, 1853, 1910, 2092, 2357, 2389, 2606
HpyF3I CTNAG 6 cut(s) 419, 450, 458, 906, 926, 2676
HpySE526I ACGT 4 cut(s) 17, 1324, 2126, 2647
Hsp92I GRCGYC 2 cut(s) 45, 2126
Hsp92II CATG 7 cut(s) 1519, 1607, 1778, 1943, 2350, 2404, 2502
HspAI GCGC 2 cut(s) 283, 2042
KpnI GGTACC 2 cut(s) 1220, 1295
Kzo9I GATC 9 cut(s) 415, 862, 1510, 1537, 1672, 1746, 2242, 2323, 2495
LguI GCTCTTC 2 cut(s) 957, 1328
LmnI GCTCC 8 cut(s) 116, 408, 1130, 1230, 1425, 1771, 1910, 2502
Lsp1109I GCAGC 3 cut(s) 1900, 1959, 2460
LweI GCATC 3 cut(s) 1041, 2044, 2209
MaeI CTAG 9 cut(s) 62, 920, 957, 1319, 1382, 1532, 1827, 1925, 2490
MaeII ACGT 4 cut(s) 17, 1324, 2126, 2647
MaeIII GTNAC 8 cut(s) 132, 453, 835, 969, 1325, 2134, 2185, 2255
MalI GATC 9 cut(s) 417, 864, 1512, 1539, 1674, 1748, 2244, 2325, 2497
MboI GATC 9 cut(s) 415, 862, 1510, 1537, 1672, 1746, 2242, 2323, 2495
MfeI CAATTG 1 cut(s) 1905
MflI RGATCY 4 cut(s) 1510, 1537, 1672, 2323
MhlI GDGCHC 4 cut(s) 952, 1340, 2465, 2507
MlsI TGGCCA 3 cut(s) 387, 2360, 2562
MluNI TGGCCA 3 cut(s) 387, 2360, 2562
MlyI GAGTC 3 cut(s) 461, 907, 1322
MmeI TCCRAC 1 cut(s) 1345
Mox20I TGGCCA 3 cut(s) 387, 2360, 2562
MscI TGGCCA 3 cut(s) 387, 2360, 2562
MseI TTAA 9 cut(s) 78, 107, 339, 477, 693, 1349, 2373, 2415, 2591
MslI CAYNNNNRTG 3 cut(s) 1779, 1968, 2622
Msp20I TGGCCA 3 cut(s) 387, 2360, 2562
MspCI CTTAAG 2 cut(s) 476, 692
MspR9I CCNGG 6 cut(s) 363, 655, 669, 1296, 2362, 2559
MunI CAATTG 1 cut(s) 1905
Mva1269I GAATGC 3 cut(s) 224, 1678, 2551
MvaI CCWGG 3 cut(s) 1296, 2362, 2559
MwoI GCNNNNNNNGC 9 cut(s) 228, 409, 751, 1853, 1910, 2092, 2357, 2389, 2606
NciI CCSGG 3 cut(s) 363, 655, 669
NcoI CCATGG 1 cut(s) 2346
NdeI CATATG 1 cut(s) 1549
NdeII GATC 9 cut(s) 415, 862, 1510, 1537, 1672, 1746, 2242, 2323, 2495
NlaIII CATG 7 cut(s) 1519, 1607, 1778, 1943, 2350, 2404, 2502
NlaIV GGNNCC 7 cut(s) 586, 679, 1126, 1218, 1293, 1633, 1648
NmeAIII GCCGAG 1 cut(s) 1053
NmuCI GTSAC 6 cut(s) 453, 835, 969, 1325, 2134, 2185
NsbI TGCGCA 1 cut(s) 2043
OliI CACNNNNGTG 1 cut(s) 2622
PagI TCATGA 1 cut(s) 1939
PciSI GCTCTTC 2 cut(s) 957, 1328
PcsI WCGNNNNNNNCGW 1 cut(s) 572
PctI GAATGC 3 cut(s) 224, 1678, 2551
PfeI GAWTC 7 cut(s) 159, 243, 305, 728, 1283, 1558, 1694
PinAI ACCGGT 1 cut(s) 736
PkrI GCNGC 5 cut(s) 282, 1915, 1949, 2475, 2529
PleI GAGTC 3 cut(s) 460, 906, 1322
PpsI GAGTC 3 cut(s) 460, 906, 1322
Ppu21I YACGTR 1 cut(s) 2648
PpuMI RGGWCCY 2 cut(s) 1019, 2364
PshAI GACNNNNGTC 1 cut(s) 272
PshBI ATTAAT 1 cut(s) 1349
Psp124BI GAGCTC 1 cut(s) 2465
Psp5II RGGWCCY 2 cut(s) 1019, 2364
Psp6I CCWGG 3 cut(s) 1294, 2360, 2557
PspFI CCCAGC 1 cut(s) 1305
PspGI CCWGG 3 cut(s) 1294, 2360, 2557
PspN4I GGNNCC 7 cut(s) 586, 679, 1126, 1218, 1293, 1633, 1648
PspPPI RGGWCCY 2 cut(s) 1019, 2364
PsrI GAACNNNNNNTAC 2 cut(s) 1461, 1493
PstNI CAGNNNCTG 1 cut(s) 2367
PsuI RGATCY 4 cut(s) 1510, 1537, 1672, 2323
RsaI GTAC 7 cut(s) 11, 16, 1039, 1218, 1293, 2013, 2156
RsaNI GTAC 7 cut(s) 10, 15, 1038, 1217, 1292, 2012, 2155
RseI CAYNNNNRTG 3 cut(s) 1779, 1968, 2622
Rsr2I CGGWCCG 1 cut(s) 225
RsrII CGGWCCG 1 cut(s) 225
SacI GAGCTC 1 cut(s) 2465
SapI GCTCTTC 2 cut(s) 957, 1328
SaqAI TTAA 9 cut(s) 78, 107, 339, 477, 693, 1349, 2373, 2415, 2591
SatI GCNGC 5 cut(s) 281, 1914, 1948, 2474, 2528
Sau3AI GATC 9 cut(s) 415, 862, 1510, 1537, 1672, 1746, 2242, 2323, 2495
SchI GAGTC 3 cut(s) 461, 907, 1322
ScrFI CCNGG 6 cut(s) 363, 655, 669, 1296, 2362, 2559
SduI GDGCHC 4 cut(s) 952, 1340, 2465, 2507
SfaNI GCATC 3 cut(s) 1041, 2044, 2209
SfcI CTRYAG 1 cut(s) 1653
SinI GGWCC 9 cut(s) 147, 207, 225, 267, 585, 1019, 1298, 2035, 2364
SmiMI CAYNNNNRTG 3 cut(s) 1779, 1968, 2622
SmlI CTYRAG 4 cut(s) 476, 692, 2026, 2177
SmoI CTYRAG 4 cut(s) 476, 692, 2026, 2177
SsiI CCGC 7 cut(s) 114, 280, 985, 2086, 2396, 2476, 2527
SspI AATATT 1 cut(s) 1371
SspMI CTAG 9 cut(s) 62, 920, 957, 1319, 1382, 1532, 1827, 1925, 2490
SstI GAGCTC 1 cut(s) 2465
StyD4I CCNGG 6 cut(s) 361, 653, 667, 1294, 2360, 2557
StyI CCWWGG 3 cut(s) 1531, 1635, 2346
TaiI ACGT 4 cut(s) 20, 1327, 2129, 2650
TaqI TCGA 7 cut(s) 566, 686, 896, 1331, 1345, 2459, 2685
TatI WGTACW 3 cut(s) 9, 1037, 2154
TauI GCSGC 2 cut(s) 283, 2530
TfiI GAWTC 7 cut(s) 159, 243, 305, 728, 1283, 1558, 1694
Tru1I TTAA 9 cut(s) 78, 107, 339, 477, 693, 1349, 2373, 2415, 2591
Tru9I TTAA 9 cut(s) 78, 107, 339, 477, 693, 1349, 2373, 2415, 2591
TscAI CASTG 7 cut(s) 730, 882, 2256, 2512, 2557, 2590, 2629
TseFI GTSAC 6 cut(s) 453, 835, 969, 1325, 2134, 2185
TseI GCWGC 3 cut(s) 1913, 1947, 2473
Tsp45I GTSAC 6 cut(s) 453, 835, 969, 1325, 2134, 2185
TspDTI ATGAA 6 cut(s) 17, 1272, 1378, 2417, 2475, 2679
TspGWI ACGGA 2 cut(s) 280, 2027
TspRI CASTG 7 cut(s) 730, 882, 2256, 2512, 2557, 2590, 2629
Vha464I CTTAAG 2 cut(s) 476, 692
VpaK11BI GGWCC 9 cut(s) 147, 207, 225, 267, 585, 1019, 1298, 2035, 2364
VspI ATTAAT 1 cut(s) 1349
XagI CCTNNNNNAGG 1 cut(s) 1427
XapI RAATTY 6 cut(s) 571, 643, 1118, 1849, 2003, 2667
XbaI TCTAGA 2 cut(s) 1318, 2489
XcmI CCANNNNNNNNNTGG 1 cut(s) 2353
XmaJI CCTAGG 1 cut(s) 1531
XmiI GTMKAC 2 cut(s) 1246, 1987
XspI CTAG 9 cut(s) 62, 920, 957, 1319, 1382, 1532, 1827, 1925, 2490
ZraI GACGTC 1 cut(s) 2127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.