Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004470.1

Orthogroup ID

OG0002531

Physical Location & Seq

Genomic Coordinates Forward (+)

14783 .. 19871

Gene Structure 5089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004470.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2637 bp

atggtggatcaaaggagcatggtatggtgtttcttgttgttgtgggcggtgttggtgtttgagcccacatttcagcaaccgagtcagcagccactgagttcacacgccgaccgagttgctctggttcagctcagatcgtctttgggtttgaggggcagggattggcccattaagtcggacccttgcttcgtttggaagggtgttgaatgcagtaatggtagagttgttgggattaacgtttctgggtttagaagaactagacttgggagtcaaaacccacaattctcagtcgatgctttggccaatttgacccttttgagttctttcaatgcctccaatttcttgcttccgggttccattcctgactggtttggccagaggctcgggtctctgcgtgttcttgatctcacttcttgttctgtgaatggtcctattccattgagtcttggaaattccaccaatctgactggtctgtctttgtctcgtaataaccttaatgggacaattcctgctagtttgagcaacttggtaagccttttggtccttgacctctctcaaaatcggcttactggatccattcccacatctttcgggaatcttgggaacctttctgttcttgacatttctgggaattacttaaccgggtcaattcctccgggcattgggaacctcttgaagcttcaatctctgaatctttccagcaacatgttgtcttcttccattcctcctgaacttgggggccttgataccttggttgaccttgatctcagctccaatctattggtaggtctgctgccttcgggtttgagcaacttgcagagaattgtagttgcggacaatttgctcagtggttctgtggatgtgctctggtcaatgcctctattgagttttcttgatgtggctggaaacaatttcactggtttgctgcccaattctagctcgaatactaatgccactgcggcagtattcaatatttctctaaattcgttttatgggcctattacacccttagttggaaagtttggtgtcattgatctttcaggaaactattttgaaggtgagataccaggttatgttggcaccaatgcatctcttgacagcaattgtctccaaaatttgaagaatcagaggactttggcagaatgttcatcgttttatgctaataggggtttgagttttgataattttgggcagccaaactctacacaacctcctgcagccgcaccacctgggaagaaaagtaataaaaatgtgatcatattggcatcagttttaggaggagttggtttgattgtggttttggtcttgtttttagtaatagtagtcctatgttcacgcaagcggggagctacaactcaaaggggggttggtgtggggtcagttcctgcaggcagcagtcccccaccagctggagcatcggttaacttttctagcgtaggagatgcattcacatatcagcagctgcttcaagctacaggtgacttcaacaatacaaacttaatgaaaaatggccacacaggggatctcttcaggggtgtcttggaaaatgggatccctgtggttattaaaaggattgatttacgttcgattaaaaaggaagcgtacttgctggagttggatttctttagtaaggtgtcaagtacaagatttgttccctttctgggacactgtttagagaatgagaacgagaagttcatggtgtacaaatacatgccaaatggggacctatcaaattctctgtacaagaaaaccaacaccctggatgatactttacagtcattggattggatcactagattaaagattgcattaggtgctgcggagggtctcacctatctgcatcatgagtgtgatccacccctcgtgcacagagatgtgcaagcaagcagtgtacttcttgatgataaatttgaagtgcggctaggaagcttgagtgatgtctgtgctcaagaaggagatactcatcaaagcaggattactaggttgctgcggttgccacagtcatccgaacaaggtgcttctggttcatcgacagcatcatgtgcctatgatgtttattgtttcgggaaggtattacttgaactggtaacaggtaaattgggcatcagtgcttccagtgaatcccaattgaaggaatcgttggatgacatacttccctacatcagtatatatgacaaggaacttgtgacaaaaattgtggatccatctttaattgtggatgaggacttattagaggaagtgtgggctatggccgtcgtggccaggtcctgcctaaatcccaagccctcaaggcgcccgctaatgagatatattctcaaggctttggaaaaccctgttaaggtagtaagggaagagagtactggctctgcaaggctcagaaaagcttcttctcgagggtcttggaatgctgctgtctttggtagctggcgcagctcatctgaggtagtggttattccaggagcctcaggtaccaaagctgaaggagtgagtggtttgaagcattcagcaaccaccggttcgcagggaagtggccaaaatggtgggggtgaacattcatcctcacgtagacggcattctagggatattttccctgaaccatctggtgtacaagatgtagagagatttgaccaggactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0009505 GO:0009506 GO:0016020 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

878

Amino Acids

94.31

Weight (kDa)

6.59

Isoelectric Point (pI)

37.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002531)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16250 AT2G16250
fragaria_vesca	FvH4_2g08850 FvH4_2g39760 FvH4_2g39760 FvH4_2g39760 FvH4_2g39760
malus_domestica	MD05G1065800.v1.1 MD08G1031300.v1.1 MD10G1075800.v1.1 MD15G1027100.v1.1
prunus_persica	Prupe.1G378900_v2.0.a1 Prupe.8G096500_v2.0.a1 Prupe.8G096500_v2.0.a1 Prupe.8G096500_v2.0.a1 Prupe.8G096500_v2.0.a1
pyrus_communis	pycom05g05720 pycom08g02470 pycom10g05940 pycom15g02310
rosa_chinensis	RchiOBHm_Chr6g0264451 RchiOBHm_Chr6g0301101
rosa_laevigata	RLG00000011278 RLG00000014252
rosa_multiflora	Rmu_co8095654.1_g000001 Rmu_sc0004470.1_g000003
rosa_roxburghii	Rroxscaffold_172G00445540 Rroxscaffold_176G00431810 Rroxscaffold_7G00167160
rosa_rugosa	Rorug06G0012700 Rorug06G0012800 Rorug06G0301300
rosa_samantha	Rh6AG132200 Rh6AG414700 Rh6BG129500 Rh6BG421700 Rh6CG127700 Rh6CG429300 Rh6DG115000 Rh6DG414600
rosa_wichuraiana	Rw6G011550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	267, 472
Acc65I	GGTACC	1 cut(s)	2468
AccB1I	GGYRCC	3 cut(s)	1079, 2292, 2468
AccB7I	CCANNNNNTGG	1 cut(s)	1409
AccI	GTMKAC	1 cut(s)	2566
AciI	CCGC	9 cut(s)	47, 833, 959, 1221, 1342, 1820, 1918, 1990, 2297
AclI	AACGTT	1 cut(s)	237
AcoI	YGGCCR	6 cut(s)	300, 373, 1510, 2250, 2259, 2530
AcsI	RAATTY	5 cut(s)	451, 982, 1114, 1732, 1907
AcuI	CTGAAG	2 cut(s)	1513, 2499
AcyI	GRCGYC	1 cut(s)	2293
AfaI	GTAC	8 cut(s)	1604, 1642, 1703, 1742, 1893, 2359, 2470, 2607
AfiI	CCNNNNNNNGG	8 cut(s)	662, 734, 1013, 1409, 1519, 1661, 2131, 2338
AflIII	ACRYGT	1 cut(s)	705
AgeI	ACCGGT	1 cut(s)	2513
AjnI	CCWGG	6 cut(s)	1066, 1228, 1758, 2261, 2455, 2628
AjuI	GAANNNNNNNTTGG	2 cut(s)	2123, 2155
Alw21I	GWGCWC	3 cut(s)	867, 1869, 1948
Alw26I	GTCTC	4 cut(s)	393, 486, 1112, 1832
Alw44I	GTGCAC	1 cut(s)	1865
AlwNI	CAGNNNCTG	4 cut(s)	94, 1385, 1462, 2268
Ama87I	CYCGRG	2 cut(s)	383, 2391
AoxI	GGCC	9 cut(s)	164, 300, 373, 739, 995, 1510, 2250, 2259, 2530
ApaLI	GTGCAC	1 cut(s)	1865
ApoI	RAATTY	5 cut(s)	451, 982, 1114, 1732, 1907
ArsI	GACNNNNNNTTYG	2 cut(s)	170, 202
AsiGI	ACCGGT	1 cut(s)	2513
Asp700I	GAANNNNTTC	1 cut(s)	2383
Asp718I	GGTACC	1 cut(s)	2468
AspLEI	GCGC	2 cut(s)	2295, 2430
AspS9I	GGNCC	8 cut(s)	165, 178, 428, 541, 739, 995, 1723, 2265
AsuC2I	CCSGG	3 cut(s)	351, 643, 657
AsuHPI	GGTGA	4 cut(s)	1070, 1490, 1822, 2558
AvaI	CYCGRG	2 cut(s)	383, 2391
AvaII	GGWCC	5 cut(s)	178, 428, 541, 1723, 2265
AxyI	CCTNAGG	1 cut(s)	2464
BaeGI	GKGCMC	1 cut(s)	1869
BaeI	ACNNNNGTAYC	2 cut(s)	738, 771
BalI	TGGCCA	5 cut(s)	302, 375, 1512, 2261, 2532
BamHI	GGATCC	3 cut(s)	572, 1551, 2200
BanI	GGYRCC	3 cut(s)	1079, 2292, 2468
BanII	GRGCYC	1 cut(s)	66
BarI	GAAGNNNNNNTAC	2 cut(s)	1047, 1079
BauI	CACGAG	1 cut(s)	1862
BbsI	GAAGAC	1 cut(s)	705
Bbv12I	GWGCWC	3 cut(s)	867, 1869, 1948
BccI	CCATC	2 cut(s)	2212, 2605
BceAI	ACGGC	2 cut(s)	2237, 2585
BcgI	CGANNNNNNTGC	4 cut(s)	98, 132, 1997, 2031
BciT130I	CCWGG	6 cut(s)	1068, 1230, 1760, 2263, 2457, 2630
BclI	TGATCA	1 cut(s)	1254
BcnI	CCSGG	3 cut(s)	351, 643, 657
BcoDI	GTCTC	4 cut(s)	393, 486, 1112, 1832
BfaI	CTAG	9 cut(s)	258, 513, 936, 1431, 1794, 1922, 1980, 2577, 2635
BfmI	CTRYAG	3 cut(s)	1215, 1386, 1473
BfoI	RGCGCY	1 cut(s)	2296
BglI	GCCNNNNNGGC	3 cut(s)	959, 2258, 2290
BmcAI	AGTACT	1 cut(s)	2359
Bme1390I	CCNGG	9 cut(s)	351, 643, 657, 1068, 1230, 1760, 2263, 2457, 2630
Bme18I	GGWCC	5 cut(s)	178, 428, 541, 1723, 2265
BmeT110I	CYCGRG	2 cut(s)	383, 2391
BmgT120I	GGNCC	8 cut(s)	165, 178, 428, 541, 739, 995, 1723, 2265
BmrFI	CCNGG	9 cut(s)	351, 643, 657, 1068, 1230, 1760, 2263, 2457, 2630
BmsI	GCATC	8 cut(s)	283, 1097, 1274, 1424, 1432, 1849, 2045, 2112
BpiI	GAAGAC	1 cut(s)	705
BpmI	CTGGAG	2 cut(s)	1431, 1631
BpuEI	CTTGAG	4 cut(s)	1932, 1951, 2272, 2300
BpuMI	CCSGG	3 cut(s)	351, 643, 657
BsaAI	YACGTR	1 cut(s)	2564
BsaBI	GATNNNNATC	1 cut(s)	1962
BsaHI	GRCGYC	1 cut(s)	2293
BsaI	GGTCTC	2 cut(s)	393, 1832
BsaJI	CCNNGG	3 cut(s)	750, 1229, 1758
BsaWI	WCCGGW	1 cut(s)	2513
BsaXI	ACNNNNNCTCC	4 cut(s)	1195, 1225, 1404, 1434
Bsc4I	CCNNNNNNNGG	8 cut(s)	662, 734, 1013, 1409, 1519, 1661, 2131, 2338
Bse118I	RCCGGY	1 cut(s)	2513
Bse1I	ACTGG	7 cut(s)	371, 472, 574, 922, 2088, 2115, 2365
Bse21I	CCTNAGG	1 cut(s)	2464
Bse8I	GATNNNNATC	1 cut(s)	1962
BseBI	CCWGG	6 cut(s)	1068, 1230, 1760, 2263, 2457, 2630
BseDI	CCNNGG	3 cut(s)	750, 1229, 1758
BseGI	GGATG	6 cut(s)	865, 1768, 2003, 2149, 2224, 2555
BseJI	GATNNNNATC	1 cut(s)	1962
BseLI	CCNNNNNNNGG	8 cut(s)	662, 734, 1013, 1409, 1519, 1661, 2131, 2338
BseMII	CTCAG	8 cut(s)	86, 145, 300, 781, 859, 2389, 2430, 2478
BseNI	ACTGG	7 cut(s)	371, 472, 574, 922, 2088, 2115, 2365
BseRI	GAGGAG	1 cut(s)	1293
BseSI	GKGCMC	1 cut(s)	1869
Bsh1285I	CGRYCG	1 cut(s)	112
BshFI	GGCC	9 cut(s)	166, 302, 375, 741, 997, 1512, 2252, 2261, 2532
BshNI	GGYRCC	3 cut(s)	1079, 2292, 2468
BshTI	ACCGGT	1 cut(s)	2513
BsiEI	CGRYCG	1 cut(s)	112
BsiHKAI	GWGCWC	3 cut(s)	867, 1869, 1948
BsiHKCI	CYCGRG	2 cut(s)	383, 2391
BsiSI	CCGG	4 cut(s)	350, 642, 656, 2514
BslFI	GGGAC	4 cut(s)	514, 1383, 1677, 1736
BslI	CCNNNNNNNGG	8 cut(s)	662, 734, 1013, 1409, 1519, 1661, 2131, 2338
BsmAI	GTCTC	4 cut(s)	393, 486, 1112, 1832
BsmFI	GGGAC	4 cut(s)	514, 1383, 1677, 1736
BsmI	GAATGC	5 cut(s)	212, 1445, 2410, 2500, 2572
BsnI	GGCC	9 cut(s)	166, 302, 375, 741, 997, 1512, 2252, 2261, 2532
Bso31I	GGTCTC	2 cut(s)	393, 1832
BsoBI	CYCGRG	2 cut(s)	383, 2391
Bsp1286I	GDGCHC	4 cut(s)	66, 867, 1869, 1948
Bsp1407I	TGTACA	3 cut(s)	1701, 1740, 2605
BspACI	CCGC	9 cut(s)	47, 833, 959, 1221, 1342, 1820, 1918, 1990, 2297
BspANI	GGCC	9 cut(s)	166, 302, 375, 741, 997, 1512, 2252, 2261, 2532
BspCNI	CTCAG	8 cut(s)	87, 144, 299, 780, 858, 2388, 2431, 2477
BspHI	TCATGA	1 cut(s)	1843
BspMAI	CTGCAG	2 cut(s)	1219, 1390
BspT107I	GGYRCC	3 cut(s)	1079, 2292, 2468
BspTNI	GGTCTC	2 cut(s)	393, 1832
BsrFI	RCCGGY	1 cut(s)	2513
BsrGI	TGTACA	3 cut(s)	1701, 1740, 2605
BsrI	ACTGG	7 cut(s)	371, 472, 574, 922, 2088, 2115, 2365
BssAI	RCCGGY	1 cut(s)	2513
BssECI	CCNNGG	3 cut(s)	750, 1229, 1758
BssNI	GRCGYC	1 cut(s)	2293
BssSI	CACGAG	1 cut(s)	1862
BssT1I	CCWWGG	1 cut(s)	750
Bst2BI	CACGAG	1 cut(s)	1862
Bst2UI	CCWGG	6 cut(s)	1068, 1230, 1760, 2263, 2457, 2630
Bst4CI	ACNGT	3 cut(s)	1670, 1776, 2001
Bst6I	CTCTTC	2 cut(s)	1532, 2346
BstACI	GRCGYC	1 cut(s)	2293
BstAPI	GCANNNNNTGC	2 cut(s)	1814, 2042
BstAUI	TGTACA	3 cut(s)	1701, 1740, 2605
BstBAI	YACGTR	1 cut(s)	2564
BstC8I	GCNNGC	6 cut(s)	1340, 1390, 1881, 1885, 2297, 2426
BstDEI	CTNAG	9 cut(s)	95, 131, 286, 767, 845, 1009, 2375, 2439, 2464
BstF5I	GGATG	6 cut(s)	865, 1768, 2003, 2149, 2224, 2555
BstH2I	RGCGCY	1 cut(s)	2296
BstHHI	GCGC	2 cut(s)	2295, 2430
BstMAI	GTCTC	4 cut(s)	393, 486, 1112, 1832
BstMCI	CGRYCG	1 cut(s)	112
BstMWI	GCNNNNNNNGC	7 cut(s)	959, 1814, 1993, 2042, 2258, 2290, 2430
BstNI	CCWGG	6 cut(s)	1068, 1230, 1760, 2263, 2457, 2630
BstNSI	RCATGY	2 cut(s)	709, 1714
BstSCI	CCNGG	9 cut(s)	349, 641, 655, 1066, 1228, 1758, 2261, 2455, 2628
BstSFI	CTRYAG	3 cut(s)	1215, 1386, 1473
BstSLI	GKGCMC	1 cut(s)	1869
BstV2I	GAAGAC	1 cut(s)	705
BstX2I	RGATCY	4 cut(s)	572, 1522, 1551, 2200
BstXI	CCANNNNNNTGG	3 cut(s)	781, 1759, 2540
BstYI	RGATCY	4 cut(s)	572, 1522, 1551, 2200
Bsu36I	CCTNAGG	1 cut(s)	2464
BsuRI	GGCC	9 cut(s)	166, 302, 375, 741, 997, 1512, 2252, 2261, 2532
BtsCI	GGATG	6 cut(s)	865, 1768, 2003, 2149, 2224, 2555
BtsI	GCAGTG	2 cut(s)	954, 1894
BtsIMutI	CAGTG	8 cut(s)	92, 853, 915, 954, 1666, 1894, 2113, 2122
Cac8I	GCNNGC	6 cut(s)	1340, 1390, 1881, 1885, 2297, 2426
CaiI	CAGNNNCTG	4 cut(s)	94, 1385, 1462, 2268
CciI	TCATGA	1 cut(s)	1843
CfoI	GCGC	2 cut(s)	2295, 2430
Cfr10I	RCCGGY	1 cut(s)	2513
Cfr13I	GGNCC	8 cut(s)	165, 178, 428, 541, 739, 995, 1723, 2265
CsiI	ACCWGGT	1 cut(s)	1066
Csp6I	GTAC	8 cut(s)	1603, 1641, 1702, 1741, 1892, 2358, 2469, 2606
CspAI	ACCGGT	1 cut(s)	2513
CspCI	CAANNNNNGTGG	2 cut(s)	2178, 2213
CviAII	CATG	6 cut(s)	19, 706, 1696, 1711, 1844, 2040
CviQI	GTAC	8 cut(s)	1603, 1641, 1702, 1741, 1892, 2358, 2469, 2606
DdeI	CTNAG	9 cut(s)	95, 131, 286, 767, 845, 1009, 2375, 2439, 2464
DinI	GGCGCC	1 cut(s)	2294
DrdI	GACNNNNNNGTC	2 cut(s)	267, 472
DseDI	GACNNNNNNGTC	2 cut(s)	267, 472
EaeI	YGGCCR	6 cut(s)	300, 373, 1510, 2250, 2259, 2530
Eam1104I	CTCTTC	2 cut(s)	1532, 2346
EarI	CTCTTC	2 cut(s)	1532, 2346
Eco130I	CCWWGG	1 cut(s)	750
Eco24I	GRGCYC	1 cut(s)	66
Eco31I	GGTCTC	2 cut(s)	393, 1832
Eco47I	GGWCC	5 cut(s)	178, 428, 541, 1723, 2265
Eco57I	CTGAAG	2 cut(s)	1513, 2499
Eco81I	CCTNAGG	1 cut(s)	2464
Eco88I	CYCGRG	2 cut(s)	383, 2391
EcoO109I	RGGNCCY	3 cut(s)	739, 1723, 2265
EcoRII	CCWGG	6 cut(s)	1066, 1228, 1758, 2261, 2455, 2628
EcoT14I	CCWWGG	1 cut(s)	750
EcoT22I	ATGCAT	2 cut(s)	1090, 1447
EcoT38I	GRGCYC	1 cut(s)	66
EgeI	GGCGCC	1 cut(s)	2294
EheI	GGCGCC	1 cut(s)	2294
ErhI	CCWWGG	1 cut(s)	750
FaeI	CATG	6 cut(s)	22, 709, 1699, 1714, 1847, 2043
FaqI	GGGAC	4 cut(s)	514, 1383, 1677, 1736
FatI	CATG	6 cut(s)	18, 705, 1695, 1710, 1843, 2039
FauI	CCCGC	2 cut(s)	1335, 2304
FbaI	TGATCA	1 cut(s)	1254
FblI	GTMKAC	1 cut(s)	2566
FokI	GGATG	6 cut(s)	872, 1775, 1990, 2156, 2231, 2542
FriOI	GRGCYC	1 cut(s)	66
FspBI	CTAG	9 cut(s)	258, 513, 936, 1431, 1794, 1922, 1980, 2577, 2635
GlaI	GCGC	2 cut(s)	2294, 2429
GsuI	CTGGAG	2 cut(s)	1431, 1631
HaeII	RGCGCY	1 cut(s)	2296
HaeIII	GGCC	9 cut(s)	166, 302, 375, 741, 997, 1512, 2252, 2261, 2532
HapII	CCGG	4 cut(s)	350, 642, 656, 2514
HhaI	GCGC	2 cut(s)	2295, 2430
Hin1I	GRCGYC	1 cut(s)	2293
Hin1II	CATG	6 cut(s)	22, 709, 1699, 1714, 1847, 2043
Hin6I	GCGC	2 cut(s)	2293, 2428
HinP1I	GCGC	2 cut(s)	2293, 2428
HincII	GTYRAC	2 cut(s)	757, 1423
HindII	GTYRAC	2 cut(s)	757, 1423
HindIII	AAGCTT	3 cut(s)	677, 1927, 2382
HinfI	GANTC	8 cut(s)	82, 268, 442, 595, 691, 1123, 2120, 2135
HpaI	GTTAAC	1 cut(s)	1423
HpaII	CCGG	4 cut(s)	350, 642, 656, 2514
HphI	GGTGA	4 cut(s)	1070, 1490, 1822, 2558
Hpy188I	TCNGA	8 cut(s)	134, 178, 465, 690, 1128, 2008, 2378, 2440
Hpy99I	CGWCG	1 cut(s)	2258
HpyAV	CCTTC	7 cut(s)	190, 807, 1049, 1946, 2062, 2125, 2474
HpyCH4III	ACNGT	3 cut(s)	1670, 1776, 2001
HpyCH4IV	ACGT	3 cut(s)	237, 1582, 2563
HpyF10VI	GCNNNNNNNGC	7 cut(s)	959, 1814, 1993, 2042, 2258, 2290, 2430
HpyF3I	CTNAG	9 cut(s)	95, 131, 286, 767, 845, 1009, 2375, 2439, 2464
HpySE526I	ACGT	3 cut(s)	237, 1582, 2563
Hsp92I	GRCGYC	1 cut(s)	2293
Hsp92II	CATG	6 cut(s)	22, 709, 1699, 1714, 1847, 2043
HspAI	GCGC	2 cut(s)	2293, 2428
KasI	GGCGCC	1 cut(s)	2292
KpnI	GGTACC	1 cut(s)	2472
Ksp22I	TGATCA	1 cut(s)	1254
KspAI	GTTAAC	1 cut(s)	1423
LmnI	GCTCC	5 cut(s)	15, 776, 1346, 1412, 2459
LweI	GCATC	8 cut(s)	283, 1097, 1274, 1424, 1432, 1849, 2045, 2112
MabI	ACCWGGT	1 cut(s)	1066
MaeI	CTAG	9 cut(s)	258, 513, 936, 1431, 1794, 1922, 1980, 2577, 2635
MaeII	ACGT	3 cut(s)	237, 1582, 2563
MaeIII	GTNAC	3 cut(s)	1478, 2086, 2185
MboII	GAAGA	8 cut(s)	264, 705, 708, 1132, 1246, 1519, 2363, 2379
MfeI	CAATTG	2 cut(s)	1102, 2126
MflI	RGATCY	4 cut(s)	572, 1522, 1551, 2200
MhlI	GDGCHC	4 cut(s)	66, 867, 1869, 1948
MlsI	TGGCCA	5 cut(s)	302, 375, 1512, 2261, 2532
MluNI	TGGCCA	5 cut(s)	302, 375, 1512, 2261, 2532
Mly113I	GGCGCC	1 cut(s)	2293
MlyI	GAGTC	3 cut(s)	91, 277, 451
MmeI	TCCRAC	4 cut(s)	156, 994, 1596, 2121
Mox20I	TGGCCA	5 cut(s)	302, 375, 1512, 2261, 2532
Mph1103I	ATGCAT	2 cut(s)	1090, 1447
MroXI	GAANNNNTTC	1 cut(s)	2383
MscI	TGGCCA	5 cut(s)	302, 375, 1512, 2261, 2532
MslI	CAYNNNNRTG	2 cut(s)	1848, 1872
Msp20I	TGGCCA	5 cut(s)	302, 375, 1512, 2261, 2532
MspA1I	CMGCKG	2 cut(s)	1409, 1462
MspI	CCGG	4 cut(s)	350, 642, 656, 2514
MspR9I	CCNGG	9 cut(s)	351, 643, 657, 1068, 1230, 1760, 2263, 2457, 2630
MunI	CAATTG	2 cut(s)	1102, 2126
Mva1269I	GAATGC	5 cut(s)	212, 1445, 2410, 2500, 2572
MvaI	CCWGG	6 cut(s)	1068, 1230, 1760, 2263, 2457, 2630
MwoI	GCNNNNNNNGC	7 cut(s)	959, 1814, 1993, 2042, 2258, 2290, 2430
NarI	GGCGCC	1 cut(s)	2293
NciI	CCSGG	3 cut(s)	351, 643, 657
NlaIII	CATG	6 cut(s)	22, 709, 1699, 1714, 1847, 2043
NmuCI	GTSAC	2 cut(s)	1478, 2185
NsiI	ATGCAT	2 cut(s)	1090, 1447
NspI	RCATGY	2 cut(s)	709, 1714
PaeR7I	CTCGAG	1 cut(s)	2391
PagI	TCATGA	1 cut(s)	1843
PciI	ACATGT	1 cut(s)	705
PctI	GAATGC	5 cut(s)	212, 1445, 2410, 2500, 2572
PdmI	GAANNNNTTC	1 cut(s)	2383
PfeI	GAWTC	5 cut(s)	595, 691, 1123, 2120, 2135
PflMI	CCANNNNNTGG	1 cut(s)	1409
PfoI	TCCNGGA	1 cut(s)	2455
PinAI	ACCGGT	1 cut(s)	2513
PleI	GAGTC	3 cut(s)	90, 276, 450
PluTI	GGCGCC	1 cut(s)	2296
PpsI	GAGTC	3 cut(s)	90, 276, 450
Ppu21I	YACGTR	1 cut(s)	2564
PpuMI	RGGWCCY	2 cut(s)	1723, 2265
PscI	ACATGT	1 cut(s)	705
Psp1406I	AACGTT	1 cut(s)	237
Psp5II	RGGWCCY	2 cut(s)	1723, 2265
Psp6I	CCWGG	6 cut(s)	1066, 1228, 1758, 2261, 2455, 2628
PspGI	CCWGG	6 cut(s)	1066, 1228, 1758, 2261, 2455, 2628
PspPI	GGNCC	8 cut(s)	165, 178, 428, 541, 739, 995, 1723, 2265
PspPPI	RGGWCCY	2 cut(s)	1723, 2265
PstI	CTGCAG	2 cut(s)	1219, 1390
PstNI	CAGNNNCTG	4 cut(s)	94, 1385, 1462, 2268
PsuI	RGATCY	4 cut(s)	572, 1522, 1551, 2200
PvuII	CAGCTG	2 cut(s)	1409, 1462
RsaI	GTAC	8 cut(s)	1604, 1642, 1703, 1742, 1893, 2359, 2470, 2607
RsaNI	GTAC	8 cut(s)	1603, 1641, 1702, 1741, 1892, 2358, 2469, 2606
RseI	CAYNNNNRTG	2 cut(s)	1848, 1872
Sau96I	GGNCC	8 cut(s)	165, 178, 428, 541, 739, 995, 1723, 2265
SbfI	CCTGCAGG	1 cut(s)	1390
ScaI	AGTACT	1 cut(s)	2359
SchI	GAGTC	3 cut(s)	91, 277, 451
ScrFI	CCNGG	9 cut(s)	351, 643, 657, 1068, 1230, 1760, 2263, 2457, 2630
SdaI	CCTGCAGG	1 cut(s)	1390
SduI	GDGCHC	4 cut(s)	66, 867, 1869, 1948
SexAI	ACCWGGT	1 cut(s)	1066
SfaNI	GCATC	8 cut(s)	283, 1097, 1274, 1424, 1432, 1849, 2045, 2112
SfcI	CTRYAG	3 cut(s)	1215, 1386, 1473
SfiI	GGCCNNNNNGGCC	1 cut(s)	2258
SfoI	GGCGCC	1 cut(s)	2294
Sfr274I	CTCGAG	1 cut(s)	2391
SinI	GGWCC	5 cut(s)	178, 428, 541, 1723, 2265
SlaI	CTCGAG	1 cut(s)	2391
SmiMI	CAYNNNNRTG	2 cut(s)	1848, 1872
SmlI	CTYRAG	5 cut(s)	1930, 1947, 2287, 2315, 2391
SmoI	CTYRAG	5 cut(s)	1930, 1947, 2287, 2315, 2391
Sse8387I	CCTGCAGG	1 cut(s)	1390
SsiI	CCGC	9 cut(s)	47, 833, 959, 1221, 1342, 1820, 1918, 1990, 2297
SspDI	GGCGCC	1 cut(s)	2292
SspI	AATATT	1 cut(s)	973
SspMI	CTAG	9 cut(s)	258, 513, 936, 1431, 1794, 1922, 1980, 2577, 2635
StyD4I	CCNGG	9 cut(s)	349, 641, 655, 1066, 1228, 1758, 2261, 2455, 2628
StyI	CCWWGG	1 cut(s)	750
TaaI	ACNGT	3 cut(s)	1670, 1776, 2001
TaiI	ACGT	3 cut(s)	240, 1585, 2566
TaqI	TCGA	5 cut(s)	291, 941, 1586, 2030, 2392
TaqII	GACCGA	1 cut(s)	126
TatI	WGTACW	6 cut(s)	1640, 1701, 1740, 1891, 2357, 2605
TauI	GCSGC	3 cut(s)	962, 1223, 1921
TfiI	GAWTC	5 cut(s)	595, 691, 1123, 2120, 2135
TscAI	CASTG	8 cut(s)	99, 853, 922, 961, 1673, 1894, 2113, 2122
TseFI	GTSAC	2 cut(s)	1478, 2185
Tsp45I	GTSAC	2 cut(s)	1478, 2185
TspDTI	ATGAA	5 cut(s)	1137, 1517, 1684, 2016, 2544
TspRI	CASTG	8 cut(s)	99, 853, 922, 961, 1673, 1894, 2113, 2122
Van91I	CCANNNNNTGG	1 cut(s)	1409
VneI	GTGCAC	1 cut(s)	1865
VpaK11BI	GGWCC	5 cut(s)	178, 428, 541, 1723, 2265
XapI	RAATTY	5 cut(s)	451, 982, 1114, 1732, 1907
XceI	RCATGY	2 cut(s)	709, 1714
XhoI	CTCGAG	1 cut(s)	2391
XmiI	GTMKAC	1 cut(s)	2566
XmnI	GAANNNNTTC	1 cut(s)	2383
XspI	CTAG	9 cut(s)	258, 513, 936, 1431, 1794, 1922, 1980, 2577, 2635
ZrmI	AGTACT	1 cut(s)	2359
Zsp2I	ATGCAT	2 cut(s)	1090, 1447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.