RchiOBHm_Chr7g0195341

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
13209658 .. 13209933
276 bp
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UTR
Exon/CDS
Intron
PRQ17469

Sequence Viewer

Length: 150 bp
ATGTTGGGTCGGGTGTACTACAATTTTGGCATAGACAATCTTCTATTCGGTGGTCTAGCGGTCGTTCCTGTTCTGGAGTTAGGTCAGCAGTGGTGGCGAAAATGTCTGGCGGTGGCATACTGGCATAGACAATCATTCTTGGCCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

49

Amino Acids

5.75

Weight (kDa)

9.1

Isoelectric Point (pI)

39.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 59, 110
AfaI GTAC 1 cut(s) 17
AoxI GGCC 1 cut(s) 141
BfaI CTAG 2 cut(s) 56, 148
BpmI CTGGAG 1 cut(s) 95
Bse1I ACTGG 1 cut(s) 125
BseNI ACTGG 1 cut(s) 125
Bsh1285I CGRYCG 1 cut(s) 63
BshFI GGCC 1 cut(s) 143
BsiEI CGRYCG 1 cut(s) 63
BsnI GGCC 1 cut(s) 143
BspACI CCGC 2 cut(s) 59, 110
BspANI GGCC 1 cut(s) 143
BsrI ACTGG 1 cut(s) 125
BstMCI CGRYCG 1 cut(s) 63
BstMWI GCNNNNNNNGC 1 cut(s) 94
BsuRI GGCC 1 cut(s) 143
BtsI GCAGTG 1 cut(s) 95
BtsIMutI CAGTG 1 cut(s) 95
Csp6I GTAC 1 cut(s) 16
CviJI RGCY 1 cut(s) 143
CviKI_1 RGCY 1 cut(s) 143
CviQI GTAC 1 cut(s) 16
FaiI YATR 3 cut(s) 32, 118, 126
FspBI CTAG 2 cut(s) 56, 148
GsuI CTGGAG 1 cut(s) 95
HaeIII GGCC 1 cut(s) 143
Hpy166II GTNNAC 1 cut(s) 16
Hpy188III TCNNGA 1 cut(s) 74
Hpy8I GTNNAC 1 cut(s) 16
HpyF10VI GCNNNNNNNGC 1 cut(s) 94
LpnPI CCDG 4 cut(s) 59, 81, 92, 106
MaeI CTAG 2 cut(s) 56, 148
MboII GAAGA 1 cut(s) 32
MluCI AATT 1 cut(s) 22
MwoI GCNNNNNNNGC 1 cut(s) 94
RsaI GTAC 1 cut(s) 17
RsaNI GTAC 1 cut(s) 16
SetI ASST 1 cut(s) 85
SgeI CNNG 6 cut(s) 23, 68, 80, 86, 119, 133
Sse9I AATT 1 cut(s) 22
SsiI CCGC 2 cut(s) 59, 110
SspMI CTAG 2 cut(s) 56, 148
TasI AATT 1 cut(s) 22
TatI WGTACW 1 cut(s) 15
TscAI CASTG 1 cut(s) 95
TspRI CASTG 1 cut(s) 95
XspI CTAG 2 cut(s) 56, 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.