Rh3CG292600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
29818014 .. 29821041
3028 bp
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UTR
Exon/CDS
Intron
Rh3CG292600.1

Sequence Viewer

Length: 195 bp
ATGAACTGGTATGGTCGTCATGGGTGGCGGATCTGGCAGGGCAAGGTAGTCGGTGGTCCGTCGGCAGTGGGGAGTTTGGGCCAAGCTCGGCATGCTGGTGGAGCTTCTCCTGCTTGGGCCTCGGCCTGCAGTGTTTGGGCAGGGGCTTTGTTGCTGGGGCTAGATGGAGTTTGGGCCTGGGATATGATCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

64

Amino Acids

6.76

Weight (kDa)

8.0

Isoelectric Point (pI)

28.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 28
AclWI GGATC 1 cut(s) 38
AjnI CCWGG 1 cut(s) 176
AluBI AGCT 2 cut(s) 86, 104
AluI AGCT 2 cut(s) 86, 104
AlwI GGATC 1 cut(s) 38
AoxI GGCC 4 cut(s) 79, 117, 123, 174
AspS9I GGNCC 4 cut(s) 56, 79, 117, 174
AvaII GGWCC 1 cut(s) 56
BccI CCATC 1 cut(s) 158
BcgI CGANNNNNNTGC 2 cut(s) 31, 65
BciT130I CCWGG 1 cut(s) 178
BfaI CTAG 1 cut(s) 161
BfmI CTRYAG 1 cut(s) 127
Bme1390I CCNGG 1 cut(s) 178
Bme18I GGWCC 1 cut(s) 56
BmgT120I GGNCC 4 cut(s) 56, 79, 117, 174
BmrFI CCNGG 1 cut(s) 178
BsaJI CCNNGG 2 cut(s) 120, 177
Bse1I ACTGG 1 cut(s) 11
BseBI CCWGG 1 cut(s) 178
BseDI CCNNGG 2 cut(s) 120, 177
BseNI ACTGG 1 cut(s) 11
BseYI CCCAGC 1 cut(s) 154
BshFI GGCC 4 cut(s) 81, 119, 125, 176
BsnI GGCC 4 cut(s) 81, 119, 125, 176
Bsp143I GATC 2 cut(s) 30, 186
BspACI CCGC 1 cut(s) 28
BspANI GGCC 4 cut(s) 81, 119, 125, 176
BspMAI CTGCAG 1 cut(s) 131
BspPI GGATC 1 cut(s) 38
BsrI ACTGG 1 cut(s) 11
BssECI CCNNGG 2 cut(s) 120, 177
BssMI GATC 2 cut(s) 30, 186
Bst2UI CCWGG 1 cut(s) 178
BstC8I GCNNGC 2 cut(s) 93, 127
BstKTI GATC 2 cut(s) 33, 189
BstMBI GATC 2 cut(s) 30, 186
BstMWI GCNNNNNNNGC 4 cut(s) 34, 92, 101, 110
BstNI CCWGG 1 cut(s) 178
BstNSI RCATGY 1 cut(s) 95
BstSCI CCNGG 1 cut(s) 176
BstSFI CTRYAG 1 cut(s) 127
BstX2I RGATCY 1 cut(s) 30
BstYI RGATCY 1 cut(s) 30
BsuRI GGCC 4 cut(s) 81, 119, 125, 176
BtsI GCAGTG 2 cut(s) 72, 136
BtsIMutI CAGTG 2 cut(s) 72, 136
Cac8I GCNNGC 2 cut(s) 93, 127
Cfr13I GGNCC 4 cut(s) 56, 79, 117, 174
CviAII CATG 2 cut(s) 20, 92
CviJI RGCY 8 cut(s) 81, 86, 104, 119, 125, 146, 160, 176
CviKI_1 RGCY 8 cut(s) 81, 86, 104, 119, 125, 146, 160, 176
DpnI GATC 2 cut(s) 32, 188
DpnII GATC 2 cut(s) 30, 186
EciI GGCGGA 1 cut(s) 43
Eco47I GGWCC 1 cut(s) 56
EcoRII CCWGG 1 cut(s) 176
FaeI CATG 2 cut(s) 23, 95
FaiI YATR 4 cut(s) 12, 21, 93, 185
FatI CATG 2 cut(s) 19, 91
FspBI CTAG 1 cut(s) 161
GsaI CCCAGC 1 cut(s) 158
HaeIII GGCC 4 cut(s) 81, 119, 125, 176
Hin1II CATG 2 cut(s) 23, 95
Hpy99I CGWCG 1 cut(s) 64
HpyCH4V TGCA 1 cut(s) 129
HpyF10VI GCNNNNNNNGC 4 cut(s) 34, 92, 101, 110
Hsp92II CATG 2 cut(s) 23, 95
Kzo9I GATC 2 cut(s) 30, 186
LmnI GCTCC 1 cut(s) 101
LpnPI CCDG 9 cut(s) 19, 23, 81, 123, 126, 139, 140, 163, 190
MaeI CTAG 1 cut(s) 161
MalI GATC 2 cut(s) 32, 188
MboI GATC 2 cut(s) 30, 186
MflI RGATCY 1 cut(s) 30
MnlI CCTC 1 cut(s) 130
MslI CAYNNNNRTG 1 cut(s) 96
MspR9I CCNGG 1 cut(s) 178
MvaI CCWGG 1 cut(s) 178
MwoI GCNNNNNNNGC 4 cut(s) 34, 92, 101, 110
NdeII GATC 2 cut(s) 30, 186
NlaIII CATG 2 cut(s) 23, 95
NmeAIII GCCGAG 2 cut(s) 67, 101
NspI RCATGY 1 cut(s) 95
PaeI GCATGC 1 cut(s) 95
Psp6I CCWGG 1 cut(s) 176
PspFI CCCAGC 1 cut(s) 154
PspGI CCWGG 1 cut(s) 176
PspPI GGNCC 4 cut(s) 56, 79, 117, 174
PstI CTGCAG 1 cut(s) 131
PsuI RGATCY 1 cut(s) 30
RseI CAYNNNNRTG 1 cut(s) 96
Sau3AI GATC 2 cut(s) 30, 186
Sau96I GGNCC 4 cut(s) 56, 79, 117, 174
ScrFI CCNGG 1 cut(s) 178
SetI ASST 3 cut(s) 48, 88, 106
SfcI CTRYAG 1 cut(s) 127
SinI GGWCC 1 cut(s) 56
SmiMI CAYNNNNRTG 1 cut(s) 96
SphI GCATGC 1 cut(s) 95
SsiI CCGC 1 cut(s) 28
SspMI CTAG 1 cut(s) 161
StyD4I CCNGG 1 cut(s) 176
TaqI TCGA 1 cut(s) 189
TscAI CASTG 2 cut(s) 72, 136
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 48
TspRI CASTG 2 cut(s) 72, 136
VpaK11BI GGWCC 1 cut(s) 56
XceI RCATGY 1 cut(s) 95
XspI CTAG 1 cut(s) 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.