Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004309

Physical Location & Seq

Genomic Coordinates Reverse (-)

17014776 .. 17018306

Gene Structure 3531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17805

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGGCTTCTTCTTCACCCAACCGATCCGCCGAGGACATCGTCGATACGACGCCGTTGCTCCGAAATTCGGGCGGGTCGTCCGACGAGAGCAACTCGGGCCGCCAGTTAGTGCGCCGGCAGAGCCTCCGCCAGGCCGCGCGGTTCCTCCGCCAGGCCAGCAGCCGGCGGCTGATGCGCGAGCCGTCGATGCTGGTGCGCGAGACCGCCGCGGAGCAATTGGAGGAGCGCCAGAGCGATTGGGCCTACTCCAAACCCGTCGTCGTTTTGGACATCATCTGGAACTTCGCTTTCGTCGTCGTGGCGGCGACGGTTCTGGTGCTCAGCCGGTTAGAGTCGCCGGATATGCCGTTGAGGCTTTGGATTGTGGGCTACGCTCTGCAATGCGTGCTGCATATGGTTTGCGTTTGTGTCGAGTTCCGGCGGCGCCAGAACCGGCGGTTTCCCGGGATGAATTCCGGTGACGGAGGGATTGGGAGCGCCGGGAATTCGAGCCCCAGGTCCAGAGACGACTCGTCGCAGTACGTGTCTTTAGCTGATCACTTGAATGAGGAGGGTACCAGTGTTGCTAAGCATCTAGAATCGGCAAATACAATGTTTTCGTTCATCTGGTGGATCATTGGATTCTACTGGGTATCAGCGGGCGGGCAATCTTTGGCACGCTCCTCCCCTCAGCTTTACTGGCTTTGTATAATTTTCCTGGGTTTTGATGTGTTTTTTGTCGTTTTCTGTGTTGCACTGGCTTGTATCATCGGGATCGCTGTTTGTTGCTGTCTTCCATGTATTATTGCACTTTTATACGCCGTGGCAGACCAGGATGGCGCATCTAAGGAAGATATTGAACAATTATCAAAATTCAAATTCCGACGAGTTAGTAGTGAGAAAGTTGCAGGCGATGCACAAGGACCTCATGGAGGAGTAATGACTGAATGTGGAACAGATTCACCCATTGAGCATGTTCTTTCACCAGAAGATGCGGAGTGTTGCATCTGCCTCTGTTCTTATGATGACGGTGTGGAGCTGAGGCAACTTCCTTGTGGTCACCATTTTCACTGTTCCTGCATCGATAAGTGGCTTTTCATTAATGCTACTTGTCCTCTCTGCAAGTACAATATTTTGAAGAGTAGCAGCAATGATCAAGGCGAAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031090 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0098588 GO:0098805 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

382

Amino Acids

42.29

Weight (kDa)

5.67

Isoelectric Point (pI)

66.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-rbx1	PF12678	325 - 368	2e-06	RING-H2 zinc finger domain
zf-RING_2	PF13639	326 - 368	2e-13	Ring finger domain
zf-RING_11	PF17123	326 - 354	3e-07	RING-like zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004309)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12760 AT1G12760 AT1G63170
fragaria_vesca	FvH4_5g01740 FvH4_5g01740 FvH4_5g01740 FvH4_5g01740
malus_domestica	MD00G1110500.v1.1 MD04G1044500.v1.1 MD04G1064900.v1.1 MD10G1187400.v1.1 MD11G1252000.v1.1 MD13G1133300.v1.1
prunus_persica	Prupe.5G092900_v2.0.a1 Prupe.5G092900_v2.0.a1 Prupe.5G092900_v2.0.a1
pyrus_communis	pycom04g05870 pycom06g07380
rosa_chinensis	RchiOBHm_Chr7g0198981
rosa_laevigata	RLG00000003827
rosa_multiflora	Rmu_co8298497.1_g000001 Rmu_sc0006266.1_g000024 Rmu_sc0007328.1_g000010
rosa_roxburghii	Rroxscaffold_3G00257250
rosa_rugosa	Rorug07G0051800 Rorug07G0051900 Rorug07G0051900
rosa_samantha	Rh7AG174900 Rh7BG178100 Rh7CG184100 Rh7DG177500
rosa_wichuraiana	Rw7G015340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	554
AccB1I	GGYRCC	2 cut(s)	423, 554
AccII	CGCG	5 cut(s)	137, 139, 177, 198, 209
AclWI	GGATC	3 cut(s)	18, 620, 761
AcsI	RAATTY	5 cut(s)	64, 451, 484, 851, 857
AcyI	GRCGYC	2 cut(s)	50, 424
AfaI	GTAC	3 cut(s)	521, 556, 1106
AfiI	CCNNNNNNNGG	5 cut(s)	67, 130, 151, 162, 911
AflIII	ACRYGT	1 cut(s)	522
AgsI	TTSAA	4 cut(s)	544, 839, 856, 1117
AhdI	GACNNNNNGTC	1 cut(s)	511
AjnI	CCWGG	5 cut(s)	129, 150, 494, 696, 810
AluBI	AGCT	3 cut(s)	533, 673, 1018
AluI	AGCT	3 cut(s)	533, 673, 1018
Alw21I	GWGCWC	1 cut(s)	321
Alw26I	GTCTC	2 cut(s)	194, 498
AlwI	GGATC	3 cut(s)	18, 620, 761
Ama87I	CYCGRG	2 cut(s)	94, 443
AoxI	GGCC	4 cut(s)	97, 132, 153, 240
ApeKI	GCWGC	3 cut(s)	159, 388, 1125
ApoI	RAATTY	5 cut(s)	64, 451, 484, 851, 857
ArsI	GACNNNNNNTTYG	2 cut(s)	243, 275
AseI	ATTAAT	1 cut(s)	1080
Asp700I	GAANNNNTTC	1 cut(s)	937
Asp718I	GGTACC	1 cut(s)	554
AspLEI	GCGC	8 cut(s)	114, 139, 177, 198, 228, 426, 479, 821
AspS9I	GGNCC	4 cut(s)	97, 240, 498, 902
AsuC2I	CCSGG	3 cut(s)	444, 445, 481
AsuHPI	GGTGA	5 cut(s)	6, 470, 933, 954, 1031
AvaI	CYCGRG	2 cut(s)	94, 443
AvaII	GGWCC	2 cut(s)	498, 902
BaeI	ACNNNNGTAYC	2 cut(s)	546, 579
BanI	GGYRCC	2 cut(s)	423, 554
BanII	GRGCYC	1 cut(s)	494
BbsI	GAAGAC	1 cut(s)	764
Bbv12I	GWGCWC	1 cut(s)	321
BbvCI	CCTCAGC	2 cut(s)	669, 1019
BbvI	GCAGC	3 cut(s)	171, 375, 1137
BccI	CCATC	1 cut(s)	809
BceAI	ACGGC	4 cut(s)	37, 166, 331, 785
BcgI	CGANNNNNNTGC	4 cut(s)	37, 71, 175, 209
BciT130I	CCWGG	5 cut(s)	131, 152, 496, 698, 812
BclI	TGATCA	2 cut(s)	535, 1132
BcnI	CCSGG	3 cut(s)	444, 445, 481
BcoDI	GTCTC	2 cut(s)	194, 498
BfaI	CTAG	1 cut(s)	575
BfoI	RGCGCY	3 cut(s)	229, 427, 480
BglI	GCCNNNNNGGC	1 cut(s)	352
BisI	GCNGC	9 cut(s)	100, 135, 160, 167, 207, 303, 389, 422, 1126
BlpI	GCTNAGC	2 cut(s)	320, 567
BlsI	GCNGC	9 cut(s)	101, 136, 161, 168, 208, 304, 390, 423, 1127
Bme1390I	CCNGG	8 cut(s)	131, 152, 444, 445, 481, 496, 698, 812
Bme18I	GGWCC	2 cut(s)	498, 902
BmeRI	GACNNNNNGTC	1 cut(s)	511
BmeT110I	CYCGRG	2 cut(s)	94, 443
BmgT120I	GGNCC	4 cut(s)	97, 240, 498, 902
BmiI	GGNNCC	3 cut(s)	143, 425, 556
BmrFI	CCNGG	8 cut(s)	131, 152, 444, 445, 481, 496, 698, 812
BmrI	ACTGGG	1 cut(s)	637
BmsI	GCATC	8 cut(s)	162, 177, 580, 830, 883, 961, 993, 1068
BmuI	ACTGGG	1 cut(s)	637
BpiI	GAAGAC	1 cut(s)	764
BplI	GAGNNNNNCTC	2 cut(s)	77, 109
Bpu10I	CCTNAGC	2 cut(s)	669, 1019
Bpu1102I	GCTNAGC	2 cut(s)	320, 567
BpuMI	CCSGG	3 cut(s)	444, 445, 481
Bsa29I	ATCGAT	1 cut(s)	1062
BsaAI	YACGTR	1 cut(s)	523
BsaHI	GRCGYC	2 cut(s)	50, 424
BsaI	GGTCTC	1 cut(s)	194
BsaJI	CCNNGG	6 cut(s)	30, 207, 443, 494, 697, 801
BsaWI	WCCGGW	1 cut(s)	455
Bsc4I	CCNNNNNNNGG	5 cut(s)	67, 130, 151, 162, 911
Bse118I	RCCGGY	4 cut(s)	114, 162, 324, 432
Bse1I	ACTGG	5 cut(s)	103, 558, 632, 683, 741
Bse3DI	GCAATG	2 cut(s)	386, 1135
BseBI	CCWGG	5 cut(s)	131, 152, 496, 698, 812
BseCI	ATCGAT	1 cut(s)	1062
BseDI	CCNNGG	6 cut(s)	30, 207, 443, 494, 697, 801
BseGI	GGATG	2 cut(s)	453, 820
BseLI	CCNNNNNNNGG	5 cut(s)	67, 130, 151, 162, 911
BseMI	GCAATG	2 cut(s)	386, 1135
BseMII	CTCAG	3 cut(s)	334, 683, 1010
BseNI	ACTGG	5 cut(s)	103, 558, 632, 683, 741
BseRI	GAGGAG	4 cut(s)	236, 563, 652, 927
BseXI	GCAGC	3 cut(s)	171, 375, 1137
Bsh1236I	CGCG	5 cut(s)	137, 139, 177, 198, 209
BshFI	GGCC	4 cut(s)	99, 134, 155, 242
BshNI	GGYRCC	2 cut(s)	423, 554
BshVI	ATCGAT	1 cut(s)	1062
BsiHKAI	GWGCWC	1 cut(s)	321
BsiHKCI	CYCGRG	2 cut(s)	94, 443
BsiSI	CCGG	9 cut(s)	115, 163, 325, 338, 418, 433, 444, 456, 480
BslI	CCNNNNNNNGG	5 cut(s)	67, 130, 151, 162, 911
BsmAI	GTCTC	2 cut(s)	194, 498
BsmBI	CGTCTC	1 cut(s)	498
BsnI	GGCC	4 cut(s)	99, 134, 155, 242
Bso31I	GGTCTC	1 cut(s)	194
BsoBI	CYCGRG	2 cut(s)	94, 443
Bsp1286I	GDGCHC	2 cut(s)	321, 494
Bsp143I	GATC	5 cut(s)	23, 535, 612, 753, 1132
Bsp1720I	GCTNAGC	2 cut(s)	320, 567
BspANI	GGCC	4 cut(s)	99, 134, 155, 242
BspCNI	CTCAG	3 cut(s)	333, 682, 1011
BspDI	ATCGAT	1 cut(s)	1062
BspFNI	CGCG	5 cut(s)	137, 139, 177, 198, 209
BspLI	GGNNCC	3 cut(s)	143, 425, 556
BspPI	GGATC	3 cut(s)	18, 620, 761
BspT107I	GGYRCC	2 cut(s)	423, 554
BspTNI	GGTCTC	1 cut(s)	194
BsrDI	GCAATG	2 cut(s)	386, 1135
BsrFI	RCCGGY	4 cut(s)	114, 162, 324, 432
BsrI	ACTGG	5 cut(s)	103, 558, 632, 683, 741
BssAI	RCCGGY	4 cut(s)	114, 162, 324, 432
BssECI	CCNNGG	6 cut(s)	30, 207, 443, 494, 697, 801
BssMI	GATC	5 cut(s)	23, 535, 612, 753, 1132
BssNI	GRCGYC	2 cut(s)	50, 424
Bst2UI	CCWGG	5 cut(s)	131, 152, 496, 698, 812
Bst4CI	ACNGT	3 cut(s)	310, 1010, 1052
Bst6I	CTCTTC	1 cut(s)	1112
BstACI	GRCGYC	2 cut(s)	50, 424
BstAPI	GCANNNNNTGC	2 cut(s)	385, 893
BstBAI	YACGTR	1 cut(s)	523
BstC8I	GCNNGC	9 cut(s)	116, 157, 164, 179, 386, 640, 644, 658, 889
BstDEI	CTNAG	5 cut(s)	320, 567, 669, 825, 1019
BstDSI	CCRYGG	2 cut(s)	207, 801
BstEII	GGTNACC	1 cut(s)	1037
BstENI	CCTNNNNNAGG	3 cut(s)	128, 149, 909
BstF5I	GGATG	2 cut(s)	453, 820
BstFNI	CGCG	5 cut(s)	137, 139, 177, 198, 209
BstH2I	RGCGCY	3 cut(s)	229, 427, 480
BstHHI	GCGC	8 cut(s)	114, 139, 177, 198, 228, 426, 479, 821
BstKTI	GATC	5 cut(s)	26, 538, 615, 756, 1135
BstMAI	GTCTC	2 cut(s)	194, 498
BstMBI	GATC	5 cut(s)	23, 535, 612, 753, 1132
BstNI	CCWGG	5 cut(s)	131, 152, 496, 698, 812
BstNSI	RCATGY	1 cut(s)	956
BstPI	GGTNACC	1 cut(s)	1037
BstSCI	CCNGG	8 cut(s)	129, 150, 442, 443, 479, 494, 696, 810
BstUI	CGCG	5 cut(s)	137, 139, 177, 198, 209
BstV1I	GCAGC	3 cut(s)	171, 375, 1137
BstV2I	GAAGAC	1 cut(s)	764
Bsu15I	ATCGAT	1 cut(s)	1062
BsuRI	GGCC	4 cut(s)	99, 134, 155, 242
BsuTUI	ATCGAT	1 cut(s)	1062
BtgI	CCRYGG	2 cut(s)	207, 801
BtgZI	GCGATG	1 cut(s)	906
BtsCI	GGATG	2 cut(s)	453, 820
BtsIMutI	CAGTG	3 cut(s)	565, 734, 1048
Cac8I	GCNNGC	9 cut(s)	116, 157, 164, 179, 386, 640, 644, 658, 889
CfoI	GCGC	8 cut(s)	114, 139, 177, 198, 228, 426, 479, 821
Cfr10I	RCCGGY	4 cut(s)	114, 162, 324, 432
Cfr13I	GGNCC	4 cut(s)	97, 240, 498, 902
Cfr42I	CCGCGG	1 cut(s)	210
Cfr9I	CCCGGG	1 cut(s)	443
ClaI	ATCGAT	1 cut(s)	1062
CseI	GACGC	1 cut(s)	58
Csp6I	GTAC	3 cut(s)	520, 555, 1105
CviAII	CATG	3 cut(s)	777, 908, 953
CviQI	GTAC	3 cut(s)	520, 555, 1105
DdeI	CTNAG	5 cut(s)	320, 567, 669, 825, 1019
DinI	GGCGCC	1 cut(s)	425
DpnI	GATC	5 cut(s)	25, 537, 614, 755, 1134
DpnII	GATC	5 cut(s)	23, 535, 612, 753, 1132
DriI	GACNNNNNGTC	1 cut(s)	511
Eam1104I	CTCTTC	1 cut(s)	1112
Eam1105I	GACNNNNNGTC	1 cut(s)	511
EarI	CTCTTC	1 cut(s)	1112
EciI	GGCGGA	3 cut(s)	16, 116, 137
Eco24I	GRGCYC	1 cut(s)	494
Eco31I	GGTCTC	1 cut(s)	194
Eco47I	GGWCC	2 cut(s)	498, 902
Eco88I	CYCGRG	2 cut(s)	94, 443
Eco91I	GGTNACC	1 cut(s)	1037
EcoNI	CCTNNNNNAGG	3 cut(s)	128, 149, 909
EcoO109I	RGGNCCY	1 cut(s)	902
EcoO65I	GGTNACC	1 cut(s)	1037
EcoRI	GAATTC	2 cut(s)	451, 484
EcoRII	CCWGG	5 cut(s)	129, 150, 494, 696, 810
EcoT38I	GRGCYC	1 cut(s)	494
EgeI	GGCGCC	1 cut(s)	425
EheI	GGCGCC	1 cut(s)	425
Esp3I	CGTCTC	1 cut(s)	498
FaeI	CATG	3 cut(s)	780, 911, 956
FaiI	YATR	9 cut(s)	344, 393, 395, 689, 778, 796, 909, 954, 1002
FatI	CATG	3 cut(s)	776, 907, 952
FauI	CCCGC	3 cut(s)	65, 631, 635
FauNDI	CATATG	1 cut(s)	393
FbaI	TGATCA	2 cut(s)	535, 1132
Fnu4HI	GCNGC	9 cut(s)	100, 135, 160, 167, 207, 303, 389, 422, 1126
FokI	GGATG	2 cut(s)	460, 827
FriOI	GRGCYC	1 cut(s)	494
Fsp4HI	GCNGC	9 cut(s)	100, 135, 160, 167, 207, 303, 389, 422, 1126
FspBI	CTAG	1 cut(s)	575
GlaI	GCGC	8 cut(s)	113, 138, 176, 197, 227, 425, 478, 820
GluI	GCNGC	9 cut(s)	100, 135, 160, 167, 207, 303, 389, 422, 1126
HaeII	RGCGCY	3 cut(s)	229, 427, 480
HaeIII	GGCC	4 cut(s)	99, 134, 155, 242
HapII	CCGG	9 cut(s)	115, 163, 325, 338, 418, 433, 444, 456, 480
HgaI	GACGC	1 cut(s)	58
HhaI	GCGC	8 cut(s)	114, 139, 177, 198, 228, 426, 479, 821
Hin1I	GRCGYC	2 cut(s)	50, 424
Hin1II	CATG	3 cut(s)	780, 911, 956
Hin6I	GCGC	8 cut(s)	112, 137, 175, 196, 226, 424, 477, 819
HinP1I	GCGC	8 cut(s)	112, 137, 175, 196, 226, 424, 477, 819
HinfI	GANTC	5 cut(s)	332, 509, 578, 621, 938
HpaII	CCGG	9 cut(s)	115, 163, 325, 338, 418, 433, 444, 456, 480
HphI	GGTGA	5 cut(s)	6, 470, 933, 954, 1031
Hpy188I	TCNGA	3 cut(s)	62, 82, 863
Hpy188III	TCNNGA	4 cut(s)	277, 501, 575, 751
HpyCH4III	ACNGT	3 cut(s)	310, 1010, 1052
HpyCH4IV	ACGT	1 cut(s)	522
HpyCH4V	TGCA	9 cut(s)	379, 391, 734, 788, 887, 896, 984, 1059, 1101
HpyF3I	CTNAG	5 cut(s)	320, 567, 669, 825, 1019
HpySE526I	ACGT	1 cut(s)	522
Hsp92I	GRCGYC	2 cut(s)	50, 424
Hsp92II	CATG	3 cut(s)	780, 911, 956
HspAI	GCGC	8 cut(s)	112, 137, 175, 196, 226, 424, 477, 819
KasI	GGCGCC	1 cut(s)	423
KpnI	GGTACC	1 cut(s)	558
KroI	GCCGGC	2 cut(s)	114, 162
KroNI	GCCGGC	2 cut(s)	116, 164
Ksp22I	TGATCA	2 cut(s)	535, 1132
KspI	CCGCGG	1 cut(s)	210
Kzo9I	GATC	5 cut(s)	23, 535, 612, 753, 1132
LmnI	GCTCC	6 cut(s)	63, 211, 223, 474, 665, 1015
Lsp1109I	GCAGC	3 cut(s)	171, 375, 1137
LweI	GCATC	8 cut(s)	162, 177, 580, 830, 883, 961, 993, 1068
MaeI	CTAG	1 cut(s)	575
MaeII	ACGT	1 cut(s)	522
MaeIII	GTNAC	2 cut(s)	458, 1037
MalI	GATC	5 cut(s)	25, 537, 614, 755, 1134
MboI	GATC	5 cut(s)	23, 535, 612, 753, 1132
MboII	GAAGA	5 cut(s)	3, 764, 842, 980, 1129
MfeI	CAATTG	1 cut(s)	215
MhlI	GDGCHC	2 cut(s)	321, 494
MluCI	AATT	8 cut(s)	64, 215, 451, 484, 690, 842, 851, 857
Mly113I	GGCGCC	1 cut(s)	424
MlyI	GAGTC	2 cut(s)	341, 503
MmeI	TCCRAC	2 cut(s)	105, 886
MroNI	GCCGGC	2 cut(s)	114, 162
MroXI	GAANNNNTTC	1 cut(s)	937
MseI	TTAA	1 cut(s)	1080
MslI	CAYNNNNRTG	1 cut(s)	543
MspA1I	CMGCKG	2 cut(s)	209, 638
MspI	CCGG	9 cut(s)	115, 163, 325, 338, 418, 433, 444, 456, 480
MspR9I	CCNGG	8 cut(s)	131, 152, 444, 445, 481, 496, 698, 812
MunI	CAATTG	1 cut(s)	215
MvaI	CCWGG	5 cut(s)	131, 152, 496, 698, 812
MvnI	CGCG	5 cut(s)	137, 139, 177, 198, 209
NaeI	GCCGGC	2 cut(s)	116, 164
NarI	GGCGCC	1 cut(s)	424
NciI	CCSGG	3 cut(s)	444, 445, 481
NdeI	CATATG	1 cut(s)	393
NdeII	GATC	5 cut(s)	23, 535, 612, 753, 1132
NgoMIV	GCCGGC	2 cut(s)	114, 162
NlaIII	CATG	3 cut(s)	780, 911, 956
NlaIV	GGNNCC	3 cut(s)	143, 425, 556
NmeAIII	GCCGAG	1 cut(s)	55
NmuCI	GTSAC	2 cut(s)	458, 1037
NspI	RCATGY	1 cut(s)	956
PcsI	WCGNNNNNNNCGW	2 cut(s)	74, 291
PdiI	GCCGGC	2 cut(s)	116, 164
PdmI	GAANNNNTTC	1 cut(s)	937
PfeI	GAWTC	3 cut(s)	578, 621, 938
PflFI	GACNNNGTC	1 cut(s)	38
PkrI	GCNGC	9 cut(s)	101, 136, 161, 168, 208, 304, 390, 423, 1127
PleI	GAGTC	2 cut(s)	340, 503
PluTI	GGCGCC	1 cut(s)	427
PpsI	GAGTC	2 cut(s)	340, 503
Ppu21I	YACGTR	1 cut(s)	523
PpuMI	RGGWCCY	1 cut(s)	902
PshBI	ATTAAT	1 cut(s)	1080
Psp5II	RGGWCCY	1 cut(s)	902
Psp6I	CCWGG	5 cut(s)	129, 150, 494, 696, 810
PspEI	GGTNACC	1 cut(s)	1037
PspGI	CCWGG	5 cut(s)	129, 150, 494, 696, 810
PspN4I	GGNNCC	3 cut(s)	143, 425, 556
PspPI	GGNCC	4 cut(s)	97, 240, 498, 902
PspPPI	RGGWCCY	1 cut(s)	902
PsyI	GACNNNGTC	1 cut(s)	38
RsaI	GTAC	3 cut(s)	521, 556, 1106
RsaNI	GTAC	3 cut(s)	520, 555, 1105
RseI	CAYNNNNRTG	1 cut(s)	543
SacII	CCGCGG	1 cut(s)	210
SaqAI	TTAA	1 cut(s)	1080
SatI	GCNGC	9 cut(s)	100, 135, 160, 167, 207, 303, 389, 422, 1126
Sau3AI	GATC	5 cut(s)	23, 535, 612, 753, 1132
Sau96I	GGNCC	4 cut(s)	97, 240, 498, 902
SchI	GAGTC	2 cut(s)	341, 503
ScrFI	CCNGG	8 cut(s)	131, 152, 444, 445, 481, 496, 698, 812
SduI	GDGCHC	2 cut(s)	321, 494
SetI	ASST	6 cut(s)	500, 525, 535, 675, 907, 1020
SfaNI	GCATC	8 cut(s)	162, 177, 580, 830, 883, 961, 993, 1068
SfoI	GGCGCC	1 cut(s)	425
Sfr303I	CCGCGG	1 cut(s)	210
SgrBI	CCGCGG	1 cut(s)	210
SinI	GGWCC	2 cut(s)	498, 902
SmaI	CCCGGG	1 cut(s)	445
SmiMI	CAYNNNNRTG	1 cut(s)	543
Sse9I	AATT	8 cut(s)	64, 215, 451, 484, 690, 842, 851, 857
SspDI	GGCGCC	1 cut(s)	423
SspI	AATATT	1 cut(s)	1111
SspMI	CTAG	1 cut(s)	575
StyD4I	CCNGG	8 cut(s)	129, 150, 442, 443, 479, 494, 696, 810
TaaI	ACNGT	3 cut(s)	310, 1010, 1052
TaiI	ACGT	1 cut(s)	525
TaqI	TCGA	5 cut(s)	42, 185, 411, 488, 1062
TasI	AATT	8 cut(s)	64, 215, 451, 484, 690, 842, 851, 857
TatI	WGTACW	1 cut(s)	1104
TauI	GCSGC	6 cut(s)	102, 137, 169, 209, 305, 424
TfiI	GAWTC	3 cut(s)	578, 621, 938
Tru1I	TTAA	1 cut(s)	1080
Tru9I	TTAA	1 cut(s)	1080
TscAI	CASTG	3 cut(s)	565, 741, 1055
TseFI	GTSAC	2 cut(s)	458, 1037
TseI	GCWGC	3 cut(s)	159, 388, 1125
Tsp45I	GTSAC	2 cut(s)	458, 1037
TspDTI	ATGAA	3 cut(s)	464, 592, 1066
TspGWI	ACGGA	1 cut(s)	477
TspMI	CCCGGG	1 cut(s)	443
TspRI	CASTG	3 cut(s)	565, 741, 1055
Tth111I	GACNNNGTC	1 cut(s)	38
VpaK11BI	GGWCC	2 cut(s)	498, 902
VspI	ATTAAT	1 cut(s)	1080
XagI	CCTNNNNNAGG	3 cut(s)	128, 149, 909
XapI	RAATTY	5 cut(s)	64, 451, 484, 851, 857
XbaI	TCTAGA	1 cut(s)	574
XceI	RCATGY	1 cut(s)	956
XmaI	CCCGGG	1 cut(s)	443
XmnI	GAANNNNTTC	1 cut(s)	937
XspI	CTAG	1 cut(s)	575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.