Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0004309

Physical Location & Seq

Genomic Coordinates Reverse (-)

14063729 .. 14067439

Gene Structure 3711 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG178100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1167 bp

ATGGTCAAACACCAAAAAAAAAAAAAAAAATCAAAACCTCTCTCTATCCGAACGACACCATCTTTATCGTCGCCGTTGTCCTATCCAACGCCCCTCGCAATCATCCATTTCGTGACCGCCACAAAACCTCCGCCTATTCGATCTCCCCAAAACGCACCGTTTCGCGATCCCCCATGGGCTGACCCAATTCAGCTCACCAAGCTAGGGTCAAATTCAATTAGCGCTATTCACACGCAACCGGCTCAAAAATCAGATTTCACGGAAATGGCTTCTTCTTCACCCAACCGATCCGCCGAGGACATCGTCGATACGACGCCGTTGCTCCGAAATTCGGGCGGGTCGTCTGACGAGAGCAACTCGGGCCGCCAATTAGTGCGCCGGCAGAGCCTCCGGCAGGCCGCGCGGTTCCTCCGCCAGGCCAGCAGCCGGCGGCTGATGCGCGAGCCGTCGATGCTGGTGCGCGAGACCGCGGCGGAGCAATTGGAGGAGCGCCAGAGCGATTGGGCCTACTCCAAACCCGTCGTCGTTTTGGACATCATCTGGAACTTCGCTTTCGTCGTCGTGGCGGCGACGGTTCTGGTTCTCAGCCGGTTAGAGTCGCCGGATATGCCGTTGAGGCTTTGGATTGTGGGCTACGCTCTGCAATGCGTGCTGCATATGGTTTGTGTTTGTGTCGAGTTCCGGCGGCGCCAGAACCGGCGGTTTCCCGGGATGAATTCCGGTGACGGAGGGATTGGGAGCGCCGGGAATTCGAGCCCCAGGTCCAGAGACGACTCGTCGCAGTACGTGTCTTTAGCTGATCACTTGAATGAGGAGGGTACCAGCAGTGTTGCTAAGCATCTAGAATCGGCAAATACAATGTTTTCGTTCATCTGGTGGATCATTGGATTCTACTGGGTATCAGCAGGCGGGCAATCTTTGGCACGTGCCTCCCCTCAGCTTTACTGGCTTTGTATAATTTTCCTGGGTTTTGATGTGTTTTTTGTCGTTTTCTGTGTTGCACTGGCTTGTATCATCGGGATCGCTGTTTGTTGCTGTCTTCCATGTATTATTGCACTTTTATACGCCGTGGCAGACCAGGTAGTTCTCGTATATTCTTTTCTCTTGTGTGCGGGGGGGTGTGTTTCATGTTCATTTCTATCTGTGTCTTCTCATAGTATACCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031090 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0098588 GO:0098805 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

388

Amino Acids

42.77

Weight (kDa)

9.06

Isoelectric Point (pI)

55.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004309)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12760 AT1G12760 AT1G63170
fragaria_vesca	FvH4_5g01740 FvH4_5g01740 FvH4_5g01740 FvH4_5g01740
malus_domestica	MD00G1110500.v1.1 MD04G1044500.v1.1 MD04G1064900.v1.1 MD10G1187400.v1.1 MD11G1252000.v1.1 MD13G1133300.v1.1
prunus_persica	Prupe.5G092900_v2.0.a1 Prupe.5G092900_v2.0.a1 Prupe.5G092900_v2.0.a1
pyrus_communis	pycom04g05870 pycom06g07380
rosa_chinensis	RchiOBHm_Chr7g0198981
rosa_laevigata	RLG00000003827
rosa_multiflora	Rmu_co8298497.1_g000001 Rmu_sc0006266.1_g000024 Rmu_sc0007328.1_g000010
rosa_roxburghii	Rroxscaffold_3G00257250
rosa_rugosa	Rorug07G0051800 Rorug07G0051900 Rorug07G0051900
rosa_samantha	Rh7AG174900 Rh7BG178100 Rh7CG184100 Rh7DG177500
rosa_wichuraiana	Rw7G015340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	818
AccB1I	GGYRCC	2 cut(s)	687, 818
AccI	GTMKAC	1 cut(s)	1159
AccII	CGCG	6 cut(s)	165, 401, 403, 441, 462, 470
AclWI	GGATC	4 cut(s)	161, 282, 887, 1028
AcsI	RAATTY	4 cut(s)	211, 328, 715, 748
AcvI	CACGTG	1 cut(s)	926
AcyI	GRCGYC	2 cut(s)	314, 688
AfaI	GTAC	2 cut(s)	785, 820
AfeI	AGCGCT	1 cut(s)	223
AfiI	CCNNNNNNNGG	5 cut(s)	204, 331, 394, 415, 426
AflIII	ACRYGT	1 cut(s)	786
AgsI	TTSAA	2 cut(s)	216, 808
AhdI	GACNNNNNGTC	1 cut(s)	775
AjnI	CCWGG	4 cut(s)	414, 758, 963, 1077
AluBI	AGCT	4 cut(s)	193, 202, 797, 940
AluI	AGCT	4 cut(s)	193, 202, 797, 940
Alw26I	GTCTC	2 cut(s)	458, 762
AlwI	GGATC	4 cut(s)	161, 282, 887, 1028
Ama87I	CYCGRG	2 cut(s)	358, 707
Aor51HI	AGCGCT	1 cut(s)	223
AoxI	GGCC	4 cut(s)	361, 396, 417, 504
ApeKI	GCWGC	2 cut(s)	423, 652
ApoI	RAATTY	4 cut(s)	211, 328, 715, 748
ArsI	GACNNNNNNTTYG	2 cut(s)	507, 539
Asp718I	GGTACC	1 cut(s)	818
AspLEI	GCGC	8 cut(s)	224, 378, 403, 441, 462, 492, 690, 743
AspS9I	GGNCC	3 cut(s)	361, 504, 762
AsuC2I	CCSGG	3 cut(s)	708, 709, 745
AsuHPI	GGTGA	3 cut(s)	187, 270, 734
AvaI	CYCGRG	2 cut(s)	358, 707
AvaII	GGWCC	1 cut(s)	762
BanI	GGYRCC	2 cut(s)	687, 818
BanII	GRGCYC	1 cut(s)	758
BbrPI	CACGTG	1 cut(s)	926
BbsI	GAAGAC	2 cut(s)	1031, 1140
BbvCI	CCTCAGC	1 cut(s)	936
BbvI	GCAGC	2 cut(s)	435, 639
BccI	CCATC	1 cut(s)	67
BceAI	ACGGC	5 cut(s)	58, 301, 430, 595, 1052
BcgI	CGANNNNNNTGC	4 cut(s)	301, 335, 439, 473
BciT130I	CCWGG	4 cut(s)	416, 760, 965, 1079
BclI	TGATCA	1 cut(s)	799
BcnI	CCSGG	3 cut(s)	708, 709, 745
BcoDI	GTCTC	2 cut(s)	458, 762
BfaI	CTAG	2 cut(s)	203, 842
BfoI	RGCGCY	4 cut(s)	225, 493, 691, 744
BglI	GCCNNNNNGGC	1 cut(s)	616
BisI	GCNGC	8 cut(s)	364, 399, 424, 431, 471, 567, 653, 686
BlpI	GCTNAGC	1 cut(s)	834
BlsI	GCNGC	8 cut(s)	365, 400, 425, 432, 472, 568, 654, 687
Bme1390I	CCNGG	7 cut(s)	416, 708, 709, 745, 760, 965, 1079
Bme18I	GGWCC	1 cut(s)	762
BmeRI	GACNNNNNGTC	1 cut(s)	775
BmeT110I	CYCGRG	2 cut(s)	358, 707
BmgT120I	GGNCC	3 cut(s)	361, 504, 762
BmiI	GGNNCC	3 cut(s)	407, 689, 820
BmrFI	CCNGG	7 cut(s)	416, 708, 709, 745, 760, 965, 1079
BmrI	ACTGGG	1 cut(s)	904
BmsI	GCATC	3 cut(s)	426, 441, 847
BmuI	ACTGGG	1 cut(s)	904
BpiI	GAAGAC	2 cut(s)	1031, 1140
BplI	GAGNNNNNCTC	2 cut(s)	341, 373
Bpu10I	CCTNAGC	1 cut(s)	936
Bpu1102I	GCTNAGC	1 cut(s)	834
BpuMI	CCSGG	3 cut(s)	708, 709, 745
BsaAI	YACGTR	2 cut(s)	787, 926
BsaHI	GRCGYC	2 cut(s)	314, 688
BsaI	GGTCTC	1 cut(s)	458
BsaJI	CCNNGG	7 cut(s)	173, 294, 468, 707, 758, 964, 1068
BsaWI	WCCGGW	1 cut(s)	719
BsaXI	ACNNNNNCTCC	2 cut(s)	112, 142
Bsc4I	CCNNNNNNNGG	5 cut(s)	204, 331, 394, 415, 426
Bse118I	RCCGGY	5 cut(s)	238, 378, 426, 588, 696
Bse1I	ACTGG	3 cut(s)	899, 950, 1008
Bse3DI	GCAATG	1 cut(s)	650
BseBI	CCWGG	4 cut(s)	416, 760, 965, 1079
BseDI	CCNNGG	7 cut(s)	173, 294, 468, 707, 758, 964, 1068
BseGI	GGATG	2 cut(s)	102, 717
BseLI	CCNNNNNNNGG	5 cut(s)	204, 331, 394, 415, 426
BseMI	GCAATG	1 cut(s)	650
BseMII	CTCAG	2 cut(s)	598, 950
BseNI	ACTGG	3 cut(s)	899, 950, 1008
BseRI	GAGGAG	2 cut(s)	500, 827
BseXI	GCAGC	2 cut(s)	435, 639
Bsh1236I	CGCG	6 cut(s)	165, 401, 403, 441, 462, 470
BshFI	GGCC	4 cut(s)	363, 398, 419, 506
BshNI	GGYRCC	2 cut(s)	687, 818
BsiHKCI	CYCGRG	2 cut(s)	358, 707
BslI	CCNNNNNNNGG	5 cut(s)	204, 331, 394, 415, 426
BsmAI	GTCTC	2 cut(s)	458, 762
BsmBI	CGTCTC	1 cut(s)	762
BsnI	GGCC	4 cut(s)	363, 398, 419, 506
Bso31I	GGTCTC	1 cut(s)	458
BsoBI	CYCGRG	2 cut(s)	358, 707
Bsp1286I	GDGCHC	1 cut(s)	758
Bsp143I	GATC	6 cut(s)	140, 166, 287, 799, 879, 1020
Bsp1720I	GCTNAGC	1 cut(s)	834
Bsp19I	CCATGG	1 cut(s)	173
Bsp68I	TCGCGA	1 cut(s)	165
BspANI	GGCC	4 cut(s)	363, 398, 419, 506
BspCNI	CTCAG	2 cut(s)	597, 949
BspFNI	CGCG	6 cut(s)	165, 401, 403, 441, 462, 470
BspLI	GGNNCC	3 cut(s)	407, 689, 820
BspPI	GGATC	4 cut(s)	161, 282, 887, 1028
BspT107I	GGYRCC	2 cut(s)	687, 818
BspTNI	GGTCTC	1 cut(s)	458
BsrDI	GCAATG	1 cut(s)	650
BsrFI	RCCGGY	5 cut(s)	238, 378, 426, 588, 696
BsrI	ACTGG	3 cut(s)	899, 950, 1008
BssAI	RCCGGY	5 cut(s)	238, 378, 426, 588, 696
BssECI	CCNNGG	7 cut(s)	173, 294, 468, 707, 758, 964, 1068
BssMI	GATC	6 cut(s)	140, 166, 287, 799, 879, 1020
BssNAI	GTATAC	1 cut(s)	1160
BssNI	GRCGYC	2 cut(s)	314, 688
BssT1I	CCWWGG	1 cut(s)	173
Bst1107I	GTATAC	1 cut(s)	1160
Bst2UI	CCWGG	4 cut(s)	416, 760, 965, 1079
Bst4CI	ACNGT	2 cut(s)	159, 574
BstACI	GRCGYC	2 cut(s)	314, 688
BstAPI	GCANNNNNTGC	1 cut(s)	649
BstBAI	YACGTR	2 cut(s)	787, 926
BstC8I	GCNNGC	8 cut(s)	380, 396, 421, 428, 443, 650, 907, 911
BstDEI	CTNAG	3 cut(s)	584, 834, 936
BstDSI	CCRYGG	3 cut(s)	173, 468, 1068
BstENI	CCTNNNNNAGG	2 cut(s)	392, 413
BstF5I	GGATG	2 cut(s)	102, 717
BstFNI	CGCG	6 cut(s)	165, 401, 403, 441, 462, 470
BstH2I	RGCGCY	4 cut(s)	225, 493, 691, 744
BstHHI	GCGC	8 cut(s)	224, 378, 403, 441, 462, 492, 690, 743
BstKTI	GATC	6 cut(s)	143, 169, 290, 802, 882, 1023
BstMAI	GTCTC	2 cut(s)	458, 762
BstMBI	GATC	6 cut(s)	140, 166, 287, 799, 879, 1020
BstNI	CCWGG	4 cut(s)	416, 760, 965, 1079
BstSCI	CCNGG	7 cut(s)	414, 706, 707, 743, 758, 963, 1077
BstUI	CGCG	6 cut(s)	165, 401, 403, 441, 462, 470
BstV1I	GCAGC	2 cut(s)	435, 639
BstV2I	GAAGAC	2 cut(s)	1031, 1140
BstZ17I	GTATAC	1 cut(s)	1160
BsuRI	GGCC	4 cut(s)	363, 398, 419, 506
BtgI	CCRYGG	3 cut(s)	173, 468, 1068
BtsCI	GGATG	2 cut(s)	102, 717
BtsI	GCAGTG	1 cut(s)	832
BtsIMutI	CAGTG	2 cut(s)	832, 1001
BtuMI	TCGCGA	1 cut(s)	165
Cac8I	GCNNGC	8 cut(s)	380, 396, 421, 428, 443, 650, 907, 911
CfoI	GCGC	8 cut(s)	224, 378, 403, 441, 462, 492, 690, 743
Cfr10I	RCCGGY	5 cut(s)	238, 378, 426, 588, 696
Cfr13I	GGNCC	3 cut(s)	361, 504, 762
Cfr42I	CCGCGG	1 cut(s)	471
Cfr9I	CCCGGG	1 cut(s)	707
CseI	GACGC	1 cut(s)	322
CsiI	ACCWGGT	1 cut(s)	1077
Csp6I	GTAC	2 cut(s)	784, 819
CviAII	CATG	3 cut(s)	174, 1044, 1128
CviQI	GTAC	2 cut(s)	784, 819
DdeI	CTNAG	3 cut(s)	584, 834, 936
DinI	GGCGCC	1 cut(s)	689
DpnI	GATC	6 cut(s)	142, 168, 289, 801, 881, 1022
DpnII	GATC	6 cut(s)	140, 166, 287, 799, 879, 1020
DriI	GACNNNNNGTC	1 cut(s)	775
Eam1105I	GACNNNNNGTC	1 cut(s)	775
EciI	GGCGGA	4 cut(s)	120, 280, 401, 488
Eco130I	CCWWGG	1 cut(s)	173
Eco24I	GRGCYC	1 cut(s)	758
Eco31I	GGTCTC	1 cut(s)	458
Eco47I	GGWCC	1 cut(s)	762
Eco47III	AGCGCT	1 cut(s)	223
Eco72I	CACGTG	1 cut(s)	926
Eco88I	CYCGRG	2 cut(s)	358, 707
EcoNI	CCTNNNNNAGG	2 cut(s)	392, 413
EcoRI	GAATTC	2 cut(s)	715, 748
EcoRII	CCWGG	4 cut(s)	414, 758, 963, 1077
EcoT14I	CCWWGG	1 cut(s)	173
EcoT38I	GRGCYC	1 cut(s)	758
EgeI	GGCGCC	1 cut(s)	689
EheI	GGCGCC	1 cut(s)	689
ErhI	CCWWGG	1 cut(s)	173
Esp3I	CGTCTC	1 cut(s)	762
FaeI	CATG	3 cut(s)	177, 1047, 1131
FatI	CATG	3 cut(s)	173, 1043, 1127
FauI	CCCGC	3 cut(s)	329, 902, 1105
FauNDI	CATATG	1 cut(s)	657
FbaI	TGATCA	1 cut(s)	799
FblI	GTMKAC	1 cut(s)	1159
Fnu4HI	GCNGC	8 cut(s)	364, 399, 424, 431, 471, 567, 653, 686
FokI	GGATG	2 cut(s)	89, 724
FriOI	GRGCYC	1 cut(s)	758
Fsp4HI	GCNGC	8 cut(s)	364, 399, 424, 431, 471, 567, 653, 686
FspBI	CTAG	2 cut(s)	203, 842
GlaI	GCGC	8 cut(s)	223, 377, 402, 440, 461, 491, 689, 742
GluI	GCNGC	8 cut(s)	364, 399, 424, 431, 471, 567, 653, 686
HaeII	RGCGCY	4 cut(s)	225, 493, 691, 744
HaeIII	GGCC	4 cut(s)	363, 398, 419, 506
HgaI	GACGC	1 cut(s)	322
HhaI	GCGC	8 cut(s)	224, 378, 403, 441, 462, 492, 690, 743
Hin1I	GRCGYC	2 cut(s)	314, 688
Hin1II	CATG	3 cut(s)	177, 1047, 1131
Hin6I	GCGC	8 cut(s)	222, 376, 401, 439, 460, 490, 688, 741
HinP1I	GCGC	8 cut(s)	222, 376, 401, 439, 460, 490, 688, 741
HinfI	GANTC	4 cut(s)	596, 773, 845, 888
HphI	GGTGA	3 cut(s)	187, 270, 734
Hpy166II	GTNNAC	1 cut(s)	1160
Hpy188I	TCNGA	4 cut(s)	50, 253, 326, 346
Hpy188III	TCNNGA	6 cut(s)	112, 164, 541, 765, 842, 1018
Hpy8I	GTNNAC	1 cut(s)	1160
HpyCH4III	ACNGT	2 cut(s)	159, 574
HpyCH4IV	ACGT	2 cut(s)	786, 925
HpyCH4V	TGCA	4 cut(s)	643, 655, 1001, 1055
HpyF3I	CTNAG	3 cut(s)	584, 834, 936
HpySE526I	ACGT	2 cut(s)	786, 925
Hsp92I	GRCGYC	2 cut(s)	314, 688
Hsp92II	CATG	3 cut(s)	177, 1047, 1131
HspAI	GCGC	8 cut(s)	222, 376, 401, 439, 460, 490, 688, 741
KasI	GGCGCC	1 cut(s)	687
KpnI	GGTACC	1 cut(s)	822
KroI	GCCGGC	2 cut(s)	378, 426
KroNI	GCCGGC	2 cut(s)	380, 428
Ksp22I	TGATCA	1 cut(s)	799
KspI	CCGCGG	1 cut(s)	471
Kzo9I	GATC	6 cut(s)	140, 166, 287, 799, 879, 1020
LmnI	GCTCC	4 cut(s)	327, 475, 487, 738
Lsp1109I	GCAGC	2 cut(s)	435, 639
LweI	GCATC	3 cut(s)	426, 441, 847
MabI	ACCWGGT	1 cut(s)	1077
MaeI	CTAG	2 cut(s)	203, 842
MaeII	ACGT	2 cut(s)	786, 925
MaeIII	GTNAC	2 cut(s)	112, 722
MalI	GATC	6 cut(s)	142, 168, 289, 801, 881, 1022
MboI	GATC	6 cut(s)	140, 166, 287, 799, 879, 1020
MboII	GAAGA	4 cut(s)	264, 267, 1031, 1140
MfeI	CAATTG	1 cut(s)	479
MhlI	GDGCHC	1 cut(s)	758
MluCI	AATT	9 cut(s)	186, 211, 216, 328, 368, 479, 715, 748, 957
Mly113I	GGCGCC	1 cut(s)	688
MlyI	GAGTC	2 cut(s)	605, 767
MmeI	TCCRAC	1 cut(s)	110
MroNI	GCCGGC	2 cut(s)	378, 426
MslI	CAYNNNNRTG	2 cut(s)	263, 807
MspA1I	CMGCKG	1 cut(s)	470
MspR9I	CCNGG	7 cut(s)	416, 708, 709, 745, 760, 965, 1079
MunI	CAATTG	1 cut(s)	479
MvaI	CCWGG	4 cut(s)	416, 760, 965, 1079
MvnI	CGCG	6 cut(s)	165, 401, 403, 441, 462, 470
NaeI	GCCGGC	2 cut(s)	380, 428
NarI	GGCGCC	1 cut(s)	688
NciI	CCSGG	3 cut(s)	708, 709, 745
NcoI	CCATGG	1 cut(s)	173
NdeI	CATATG	1 cut(s)	657
NdeII	GATC	6 cut(s)	140, 166, 287, 799, 879, 1020
NgoMIV	GCCGGC	2 cut(s)	378, 426
NlaIII	CATG	3 cut(s)	177, 1047, 1131
NlaIV	GGNNCC	3 cut(s)	407, 689, 820
NmeAIII	GCCGAG	1 cut(s)	319
NmuCI	GTSAC	2 cut(s)	112, 722
NruI	TCGCGA	1 cut(s)	165
PcsI	WCGNNNNNNNCGW	2 cut(s)	338, 555
PdiI	GCCGGC	2 cut(s)	380, 428
PfeI	GAWTC	2 cut(s)	845, 888
PflFI	GACNNNGTC	1 cut(s)	302
PkrI	GCNGC	8 cut(s)	365, 400, 425, 432, 472, 568, 654, 687
PleI	GAGTC	2 cut(s)	604, 767
PluTI	GGCGCC	1 cut(s)	691
PmaCI	CACGTG	1 cut(s)	926
PmlI	CACGTG	1 cut(s)	926
PpsI	GAGTC	2 cut(s)	604, 767
Ppu21I	YACGTR	2 cut(s)	787, 926
Psp6I	CCWGG	4 cut(s)	414, 758, 963, 1077
PspCI	CACGTG	1 cut(s)	926
PspGI	CCWGG	4 cut(s)	414, 758, 963, 1077
PspN4I	GGNNCC	3 cut(s)	407, 689, 820
PspPI	GGNCC	3 cut(s)	361, 504, 762
PsyI	GACNNNGTC	1 cut(s)	302
RruI	TCGCGA	1 cut(s)	165
RsaI	GTAC	2 cut(s)	785, 820
RsaNI	GTAC	2 cut(s)	784, 819
RseI	CAYNNNNRTG	2 cut(s)	263, 807
SacII	CCGCGG	1 cut(s)	471
SatI	GCNGC	8 cut(s)	364, 399, 424, 431, 471, 567, 653, 686
Sau3AI	GATC	6 cut(s)	140, 166, 287, 799, 879, 1020
Sau96I	GGNCC	3 cut(s)	361, 504, 762
SchI	GAGTC	2 cut(s)	605, 767
ScrFI	CCNGG	7 cut(s)	416, 708, 709, 745, 760, 965, 1079
SduI	GDGCHC	1 cut(s)	758
SexAI	ACCWGGT	1 cut(s)	1077
SfaNI	GCATC	3 cut(s)	426, 441, 847
SfoI	GGCGCC	1 cut(s)	689
Sfr303I	CCGCGG	1 cut(s)	471
SgrBI	CCGCGG	1 cut(s)	471
SinI	GGWCC	1 cut(s)	762
SmaI	CCCGGG	1 cut(s)	709
SmiMI	CAYNNNNRTG	2 cut(s)	263, 807
Sse9I	AATT	9 cut(s)	186, 211, 216, 328, 368, 479, 715, 748, 957
SspDI	GGCGCC	1 cut(s)	687
SspMI	CTAG	2 cut(s)	203, 842
StyD4I	CCNGG	7 cut(s)	414, 706, 707, 743, 758, 963, 1077
StyI	CCWWGG	1 cut(s)	173
TaaI	ACNGT	2 cut(s)	159, 574
TaiI	ACGT	2 cut(s)	789, 928
TaqI	TCGA	5 cut(s)	139, 306, 449, 675, 752
TasI	AATT	9 cut(s)	186, 211, 216, 328, 368, 479, 715, 748, 957
TauI	GCSGC	6 cut(s)	366, 401, 433, 473, 569, 688
TfiI	GAWTC	2 cut(s)	845, 888
TscAI	CASTG	2 cut(s)	832, 1008
TseFI	GTSAC	2 cut(s)	112, 722
TseI	GCWGC	2 cut(s)	423, 652
Tsp45I	GTSAC	2 cut(s)	112, 722
TspDTI	ATGAA	4 cut(s)	728, 859, 1116, 1122
TspGWI	ACGGA	2 cut(s)	275, 741
TspMI	CCCGGG	1 cut(s)	707
TspRI	CASTG	2 cut(s)	832, 1008
Tth111I	GACNNNGTC	1 cut(s)	302
VpaK11BI	GGWCC	1 cut(s)	762
XagI	CCTNNNNNAGG	2 cut(s)	392, 413
XapI	RAATTY	4 cut(s)	211, 328, 715, 748
XbaI	TCTAGA	1 cut(s)	841
XmaI	CCCGGG	1 cut(s)	707
XmiI	GTMKAC	1 cut(s)	1159
XspI	CTAG	2 cut(s)	203, 842

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.