Rh7CG184100

E3 ubiquitin-protein ligase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
16070128 .. 16075242
5115 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG184100.1

Sequence Viewer

Length: 1227 bp
ATGGTCAAACGCAAAAAAGAAAAAGAAAAAAAGAATCTCTCTCTATCCGAACGACACCATCTTTATCGTCGCCGTTGTCCTATCCTACCAAACCCCCCTCGCAATCATCCATTTCGTGACCGCCACAAAACCTCCGCCTATTCGATCTCCCCAAAACGCACCGTTTCGCGATCCCCCCCATGGGCTGACCCAATTCAGCTCACCAAGCTAGGGTCAAATTCAATTAACGCGATTCACACGCAACCGGCTCAAAAATCCGATTTCACGGAAATGGCTTCTTCTTCACCCAACCGATCCGCCGAGGACATCGTCGATACGACGCCGCTGCTCCGAAATTCGGGCGGGTCGTCCGACGAGAGCAACTCGGGCCGCCAATTAGTGCGCCGGCAGAGCCTCCGCCAGGCCGCGAGGTTCCTCCGCCAGGCCAGCAGCCGGCGGCTGATGCGCGAGCCGTCGATGCTGGTGCGCGAGACCGCCGCGGAGCAATTGGAGGAGCGCCAGAGCGATTGGGCCTACTCCAAACCCGTCGTCGTTTTGGACATCATCTGGAACTTCGCTTTCGTCGTCGTGGCGGCGACGGTTCTGGTGCTCAGCCGGTTAGAGTCGCCGGATATGCCGTTGAGGCTTTGGATTGTGGGCTACGCTCTGCAATGCGTGCTGCATATGGTGTGCGTTTGTGTCGAGTTTCGGCGGCGCCAGAACCGGCGGTTTCCCGGGATGAATTCCGGTGACGGAGGGATTGGGAGCACCGGGAATTCGAGCCCCAGGTCCAGAGACGACTCGTCGCAGTACGTGTCTTTAGCTGATCACTTGAATGAGGAGGGTACCAGCAGTGTTGCTAAGCATCTAGAATCGGCAAATACAATGTTTTCGTTCATCTGGTGGATCATTGGATTCTACTGGGTATCAGCAGGCGGGCAATCTTTGGCACGTTCCTCCCCTCAGCTTTACTGGCTTTGTATAATTTTCCTGGGTTTTGATGTGTTTTTTGTCGTTTTCTGTGTTGCACTGGCTTGTATCATCGGGATCGCTGTTTGTTGCTGTCTTCCATGTATTATTGCACTTTTATACGCCGTGGCAGACCAGGTAGTCCTCGTATATTCTTCTCTCTTGTGTGTGTGTGGGGGTGTGTTTCATGTTCATTTCTATCTGTGTCTTCTCATAGTAATCCATAGGTTATGTTTATATTACTGCAACGCCAGAAAGAGGCAGCAGACCTGCTTGTAA

Protein Analysis

408

Amino Acids

46.11

Weight (kDa)

9.39

Isoelectric Point (pI)

63.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1088
Acc65I GGTACC 1 cut(s) 824
AccB1I GGYRCC 2 cut(s) 693, 824
AccII CGCG 6 cut(s) 169, 230, 407, 447, 468, 479
AclWI GGATC 4 cut(s) 165, 288, 893, 1034
AcsI RAATTY 4 cut(s) 217, 334, 721, 754
AcyI GRCGYC 2 cut(s) 320, 694
AfaI GTAC 2 cut(s) 791, 826
AfiI CCNNNNNNNGG 8 cut(s) 180, 181, 210, 337, 400, 421, 432, 1206
AflIII ACRYGT 1 cut(s) 792
AgsI TTSAA 2 cut(s) 222, 814
AhdI GACNNNNNGTC 1 cut(s) 781
AjnI CCWGG 5 cut(s) 399, 420, 764, 969, 1083
AluBI AGCT 4 cut(s) 199, 208, 803, 946
AluI AGCT 4 cut(s) 199, 208, 803, 946
Alw21I GWGCWC 2 cut(s) 591, 749
Alw26I GTCTC 2 cut(s) 464, 768
AlwI GGATC 4 cut(s) 165, 288, 893, 1034
Ama87I CYCGRG 2 cut(s) 364, 713
AoxI GGCC 4 cut(s) 367, 402, 423, 510
ApeKI GCWGC 4 cut(s) 325, 429, 658, 1210
ApoI RAATTY 4 cut(s) 217, 334, 721, 754
ArsI GACNNNNNNTTYG 2 cut(s) 513, 545
Asp718I GGTACC 1 cut(s) 824
AspLEI GCGC 5 cut(s) 384, 447, 468, 498, 696
AspS9I GGNCC 3 cut(s) 367, 510, 768
AsuC2I CCSGG 3 cut(s) 714, 715, 751
AsuHPI GGTGA 3 cut(s) 193, 276, 740
AvaI CYCGRG 2 cut(s) 364, 713
AvaII GGWCC 1 cut(s) 768
BanI GGYRCC 2 cut(s) 693, 824
BanII GRGCYC 1 cut(s) 764
BbsI GAAGAC 2 cut(s) 1037, 1148
Bbv12I GWGCWC 2 cut(s) 591, 749
BbvCI CCTCAGC 1 cut(s) 942
BbvI GCAGC 4 cut(s) 312, 441, 645, 1222
BccI CCATC 1 cut(s) 66
BceAI ACGGC 4 cut(s) 57, 436, 601, 1058
BcgI CGANNNNNNTGC 4 cut(s) 307, 341, 445, 479
BciT130I CCWGG 5 cut(s) 401, 422, 766, 971, 1085
BclI TGATCA 1 cut(s) 805
BcnI CCSGG 3 cut(s) 714, 715, 751
BcoDI GTCTC 2 cut(s) 464, 768
BfaI CTAG 2 cut(s) 209, 848
BfoI RGCGCY 2 cut(s) 499, 697
BglI GCCNNNNNGGC 1 cut(s) 622
BlpI GCTNAGC 2 cut(s) 590, 840
Bme1390I CCNGG 8 cut(s) 401, 422, 714, 715, 751, 766, 971, 1085
Bme18I GGWCC 1 cut(s) 768
BmeRI GACNNNNNGTC 1 cut(s) 781
BmeT110I CYCGRG 2 cut(s) 364, 713
BmgT120I GGNCC 3 cut(s) 367, 510, 768
BmiI GGNNCC 3 cut(s) 413, 695, 826
BmrFI CCNGG 8 cut(s) 401, 422, 714, 715, 751, 766, 971, 1085
BmrI ACTGGG 1 cut(s) 910
BmsI GCATC 3 cut(s) 432, 447, 853
BmuI ACTGGG 1 cut(s) 910
BpiI GAAGAC 2 cut(s) 1037, 1148
BplI GAGNNNNNCTC 2 cut(s) 347, 379
Bpu10I CCTNAGC 1 cut(s) 942
Bpu1102I GCTNAGC 2 cut(s) 590, 840
BpuMI CCSGG 3 cut(s) 714, 715, 751
BsaAI YACGTR 1 cut(s) 793
BsaHI GRCGYC 2 cut(s) 320, 694
BsaI GGTCTC 1 cut(s) 464
BsaJI CCNNGG 7 cut(s) 179, 300, 477, 713, 764, 970, 1074
BsaWI WCCGGW 1 cut(s) 725
BsaXI ACNNNNNCTCC 2 cut(s) 116, 146
Bsc4I CCNNNNNNNGG 8 cut(s) 180, 181, 210, 337, 400, 421, 432, 1206
Bse118I RCCGGY 5 cut(s) 244, 384, 432, 594, 702
Bse1I ACTGG 3 cut(s) 905, 956, 1014
Bse3DI GCAATG 1 cut(s) 656
BseBI CCWGG 5 cut(s) 401, 422, 766, 971, 1085
BseDI CCNNGG 7 cut(s) 179, 300, 477, 713, 764, 970, 1074
BseGI GGATG 2 cut(s) 106, 723
BseLI CCNNNNNNNGG 8 cut(s) 180, 181, 210, 337, 400, 421, 432, 1206
BseMI GCAATG 1 cut(s) 656
BseMII CTCAG 2 cut(s) 604, 956
BseNI ACTGG 3 cut(s) 905, 956, 1014
BseRI GAGGAG 2 cut(s) 506, 833
BseXI GCAGC 4 cut(s) 312, 441, 645, 1222
Bsh1236I CGCG 6 cut(s) 169, 230, 407, 447, 468, 479
BshFI GGCC 4 cut(s) 369, 404, 425, 512
BshNI GGYRCC 2 cut(s) 693, 824
BsiHKAI GWGCWC 2 cut(s) 591, 749
BsiHKCI CYCGRG 2 cut(s) 364, 713
BsiSI CCGG 9 cut(s) 245, 385, 433, 595, 608, 703, 714, 726, 750
BslI CCNNNNNNNGG 8 cut(s) 180, 181, 210, 337, 400, 421, 432, 1206
BsmAI GTCTC 2 cut(s) 464, 768
BsmBI CGTCTC 1 cut(s) 768
BsnI GGCC 4 cut(s) 369, 404, 425, 512
Bso31I GGTCTC 1 cut(s) 464
BsoBI CYCGRG 2 cut(s) 364, 713
Bsp1286I GDGCHC 3 cut(s) 591, 749, 764
Bsp143I GATC 6 cut(s) 144, 170, 293, 805, 885, 1026
Bsp1720I GCTNAGC 2 cut(s) 590, 840
Bsp19I CCATGG 1 cut(s) 179
Bsp68I TCGCGA 1 cut(s) 169
BspANI GGCC 4 cut(s) 369, 404, 425, 512
BspCNI CTCAG 2 cut(s) 603, 955
BspFNI CGCG 6 cut(s) 169, 230, 407, 447, 468, 479
BspLI GGNNCC 3 cut(s) 413, 695, 826
BspPI GGATC 4 cut(s) 165, 288, 893, 1034
BspT107I GGYRCC 2 cut(s) 693, 824
BspTNI GGTCTC 1 cut(s) 464
BsrDI GCAATG 1 cut(s) 656
BsrFI RCCGGY 5 cut(s) 244, 384, 432, 594, 702
BsrI ACTGG 3 cut(s) 905, 956, 1014
BssAI RCCGGY 5 cut(s) 244, 384, 432, 594, 702
BssECI CCNNGG 7 cut(s) 179, 300, 477, 713, 764, 970, 1074
BssMI GATC 6 cut(s) 144, 170, 293, 805, 885, 1026
BssNI GRCGYC 2 cut(s) 320, 694
BssT1I CCWWGG 1 cut(s) 179
Bst2UI CCWGG 5 cut(s) 401, 422, 766, 971, 1085
Bst4CI ACNGT 2 cut(s) 163, 580
BstACI GRCGYC 2 cut(s) 320, 694
BstAPI GCANNNNNTGC 1 cut(s) 655
BstBAI YACGTR 1 cut(s) 793
BstC8I GCNNGC 7 cut(s) 386, 427, 434, 449, 656, 913, 917
BstDEI CTNAG 3 cut(s) 590, 840, 942
BstDSI CCRYGG 3 cut(s) 179, 477, 1074
BstENI CCTNNNNNAGG 2 cut(s) 398, 419
BstF5I GGATG 2 cut(s) 106, 723
BstFNI CGCG 6 cut(s) 169, 230, 407, 447, 468, 479
BstH2I RGCGCY 2 cut(s) 499, 697
BstHHI GCGC 5 cut(s) 384, 447, 468, 498, 696
BstKTI GATC 6 cut(s) 147, 173, 296, 808, 888, 1029
BstMAI GTCTC 2 cut(s) 464, 768
BstMBI GATC 6 cut(s) 144, 170, 293, 805, 885, 1026
BstNI CCWGG 5 cut(s) 401, 422, 766, 971, 1085
BstSCI CCNGG 8 cut(s) 399, 420, 712, 713, 749, 764, 969, 1083
BstUI CGCG 6 cut(s) 169, 230, 407, 447, 468, 479
BstV1I GCAGC 4 cut(s) 312, 441, 645, 1222
BstV2I GAAGAC 2 cut(s) 1037, 1148
BsuRI GGCC 4 cut(s) 369, 404, 425, 512
BtgI CCRYGG 3 cut(s) 179, 477, 1074
BtsCI GGATG 2 cut(s) 106, 723
BtsI GCAGTG 1 cut(s) 838
BtsIMutI CAGTG 2 cut(s) 838, 1007
BtuMI TCGCGA 1 cut(s) 169
Cac8I GCNNGC 7 cut(s) 386, 427, 434, 449, 656, 913, 917
CfoI GCGC 5 cut(s) 384, 447, 468, 498, 696
Cfr10I RCCGGY 5 cut(s) 244, 384, 432, 594, 702
Cfr13I GGNCC 3 cut(s) 367, 510, 768
Cfr42I CCGCGG 1 cut(s) 480
Cfr9I CCCGGG 1 cut(s) 713
CseI GACGC 1 cut(s) 328
CsiI ACCWGGT 1 cut(s) 1083
Csp6I GTAC 2 cut(s) 790, 825
CviAII CATG 3 cut(s) 180, 1050, 1136
CviQI GTAC 2 cut(s) 790, 825
DdeI CTNAG 3 cut(s) 590, 840, 942
DinI GGCGCC 1 cut(s) 695
DpnI GATC 6 cut(s) 146, 172, 295, 807, 887, 1028
DpnII GATC 6 cut(s) 144, 170, 293, 805, 885, 1026
DrdI GACNNNNNNGTC 1 cut(s) 1088
DriI GACNNNNNGTC 1 cut(s) 781
DseDI GACNNNNNNGTC 1 cut(s) 1088
Eam1105I GACNNNNNGTC 1 cut(s) 781
EciI GGCGGA 4 cut(s) 124, 286, 386, 407
Eco130I CCWWGG 1 cut(s) 179
Eco24I GRGCYC 1 cut(s) 764
Eco31I GGTCTC 1 cut(s) 464
Eco47I GGWCC 1 cut(s) 768
Eco88I CYCGRG 2 cut(s) 364, 713
EcoNI CCTNNNNNAGG 2 cut(s) 398, 419
EcoRI GAATTC 2 cut(s) 721, 754
EcoRII CCWGG 5 cut(s) 399, 420, 764, 969, 1083
EcoT14I CCWWGG 1 cut(s) 179
EcoT38I GRGCYC 1 cut(s) 764
EgeI GGCGCC 1 cut(s) 695
EheI GGCGCC 1 cut(s) 695
ErhI CCWWGG 1 cut(s) 179
Esp3I CGTCTC 1 cut(s) 768
FaeI CATG 3 cut(s) 183, 1053, 1139
FatI CATG 3 cut(s) 179, 1049, 1135
FauI CCCGC 2 cut(s) 335, 908
FauNDI CATATG 1 cut(s) 663
FbaI TGATCA 1 cut(s) 805
FokI GGATG 2 cut(s) 93, 730
FriOI GRGCYC 1 cut(s) 764
FspBI CTAG 2 cut(s) 209, 848
GlaI GCGC 5 cut(s) 383, 446, 467, 497, 695
HaeII RGCGCY 2 cut(s) 499, 697
HaeIII GGCC 4 cut(s) 369, 404, 425, 512
HapII CCGG 9 cut(s) 245, 385, 433, 595, 608, 703, 714, 726, 750
HgaI GACGC 1 cut(s) 328
HhaI GCGC 5 cut(s) 384, 447, 468, 498, 696
Hin1I GRCGYC 2 cut(s) 320, 694
Hin1II CATG 3 cut(s) 183, 1053, 1139
Hin6I GCGC 5 cut(s) 382, 445, 466, 496, 694
HinP1I GCGC 5 cut(s) 382, 445, 466, 496, 694
HinfI GANTC 6 cut(s) 34, 232, 602, 779, 851, 894
HpaII CCGG 9 cut(s) 245, 385, 433, 595, 608, 703, 714, 726, 750
HphI GGTGA 3 cut(s) 193, 276, 740
Hpy188I TCNGA 4 cut(s) 49, 259, 332, 352
Hpy188III TCNNGA 6 cut(s) 116, 168, 547, 771, 848, 1024
HpyCH4III ACNGT 2 cut(s) 163, 580
HpyCH4IV ACGT 2 cut(s) 792, 931
HpyCH4V TGCA 5 cut(s) 649, 661, 1007, 1061, 1194
HpyF3I CTNAG 3 cut(s) 590, 840, 942
HpySE526I ACGT 2 cut(s) 792, 931
Hsp92I GRCGYC 2 cut(s) 320, 694
Hsp92II CATG 3 cut(s) 183, 1053, 1139
HspAI GCGC 5 cut(s) 382, 445, 466, 496, 694
KasI GGCGCC 1 cut(s) 693
KpnI GGTACC 1 cut(s) 828
KroI GCCGGC 2 cut(s) 384, 432
KroNI GCCGGC 2 cut(s) 386, 434
Ksp22I TGATCA 1 cut(s) 805
KspI CCGCGG 1 cut(s) 480
Kzo9I GATC 6 cut(s) 144, 170, 293, 805, 885, 1026
LmnI GCTCC 4 cut(s) 333, 481, 493, 744
Lsp1109I GCAGC 4 cut(s) 312, 441, 645, 1222
LweI GCATC 3 cut(s) 432, 447, 853
MabI ACCWGGT 1 cut(s) 1083
MaeI CTAG 2 cut(s) 209, 848
MaeII ACGT 2 cut(s) 792, 931
MaeIII GTNAC 2 cut(s) 116, 728
MalI GATC 6 cut(s) 146, 172, 295, 807, 887, 1028
MboI GATC 6 cut(s) 144, 170, 293, 805, 885, 1026
MboII GAAGA 5 cut(s) 270, 273, 1037, 1095, 1148
MfeI CAATTG 1 cut(s) 485
MhlI GDGCHC 3 cut(s) 591, 749, 764
MluCI AATT 9 cut(s) 192, 217, 222, 334, 374, 485, 721, 754, 963
Mly113I GGCGCC 1 cut(s) 694
MlyI GAGTC 2 cut(s) 611, 773
MmeI TCCRAC 1 cut(s) 375
MroNI GCCGGC 2 cut(s) 384, 432
MseI TTAA 1 cut(s) 225
MslI CAYNNNNRTG 2 cut(s) 269, 813
MspA1I CMGCKG 2 cut(s) 325, 479
MspI CCGG 9 cut(s) 245, 385, 433, 595, 608, 703, 714, 726, 750
MspR9I CCNGG 8 cut(s) 401, 422, 714, 715, 751, 766, 971, 1085
MunI CAATTG 1 cut(s) 485
MvaI CCWGG 5 cut(s) 401, 422, 766, 971, 1085
MvnI CGCG 6 cut(s) 169, 230, 407, 447, 468, 479
NaeI GCCGGC 2 cut(s) 386, 434
NarI GGCGCC 1 cut(s) 694
NciI CCSGG 3 cut(s) 714, 715, 751
NcoI CCATGG 1 cut(s) 179
NdeI CATATG 1 cut(s) 663
NdeII GATC 6 cut(s) 144, 170, 293, 805, 885, 1026
NgoMIV GCCGGC 2 cut(s) 384, 432
NlaIII CATG 3 cut(s) 183, 1053, 1139
NlaIV GGNNCC 3 cut(s) 413, 695, 826
NmeAIII GCCGAG 1 cut(s) 325
NmuCI GTSAC 2 cut(s) 116, 728
NruI TCGCGA 1 cut(s) 169
PcsI WCGNNNNNNNCGW 2 cut(s) 344, 561
PdiI GCCGGC 2 cut(s) 386, 434
PfeI GAWTC 4 cut(s) 34, 232, 851, 894
PflFI GACNNNGTC 1 cut(s) 308
PleI GAGTC 2 cut(s) 610, 773
PluTI GGCGCC 1 cut(s) 697
PpsI GAGTC 2 cut(s) 610, 773
Ppu21I YACGTR 1 cut(s) 793
Psp6I CCWGG 5 cut(s) 399, 420, 764, 969, 1083
PspGI CCWGG 5 cut(s) 399, 420, 764, 969, 1083
PspN4I GGNNCC 3 cut(s) 413, 695, 826
PspPI GGNCC 3 cut(s) 367, 510, 768
PsyI GACNNNGTC 1 cut(s) 308
RruI TCGCGA 1 cut(s) 169
RsaI GTAC 2 cut(s) 791, 826
RsaNI GTAC 2 cut(s) 790, 825
RseI CAYNNNNRTG 2 cut(s) 269, 813
SacII CCGCGG 1 cut(s) 480
SaqAI TTAA 1 cut(s) 225
Sau3AI GATC 6 cut(s) 144, 170, 293, 805, 885, 1026
Sau96I GGNCC 3 cut(s) 367, 510, 768
SchI GAGTC 2 cut(s) 611, 773
ScrFI CCNGG 8 cut(s) 401, 422, 714, 715, 751, 766, 971, 1085
SduI GDGCHC 3 cut(s) 591, 749, 764
SexAI ACCWGGT 1 cut(s) 1083
SfaNI GCATC 3 cut(s) 432, 447, 853
SfoI GGCGCC 1 cut(s) 695
Sfr303I CCGCGG 1 cut(s) 480
SgrBI CCGCGG 1 cut(s) 480
SinI GGWCC 1 cut(s) 768
SmaI CCCGGG 1 cut(s) 715
SmiMI CAYNNNNRTG 2 cut(s) 269, 813
Sse9I AATT 9 cut(s) 192, 217, 222, 334, 374, 485, 721, 754, 963
SspDI GGCGCC 1 cut(s) 693
SspMI CTAG 2 cut(s) 209, 848
StyD4I CCNGG 8 cut(s) 399, 420, 712, 713, 749, 764, 969, 1083
StyI CCWWGG 1 cut(s) 179
TaaI ACNGT 2 cut(s) 163, 580
TaiI ACGT 2 cut(s) 795, 934
TaqI TCGA 5 cut(s) 143, 312, 455, 681, 758
TasI AATT 9 cut(s) 192, 217, 222, 334, 374, 485, 721, 754, 963
TauI GCSGC 7 cut(s) 325, 372, 407, 439, 479, 575, 694
TfiI GAWTC 4 cut(s) 34, 232, 851, 894
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TscAI CASTG 2 cut(s) 838, 1014
TseFI GTSAC 2 cut(s) 116, 728
TseI GCWGC 4 cut(s) 325, 429, 658, 1210
Tsp45I GTSAC 2 cut(s) 116, 728
TspDTI ATGAA 4 cut(s) 734, 865, 1124, 1130
TspGWI ACGGA 2 cut(s) 281, 747
TspMI CCCGGG 1 cut(s) 713
TspRI CASTG 2 cut(s) 838, 1014
Tth111I GACNNNGTC 1 cut(s) 308
VpaK11BI GGWCC 1 cut(s) 768
XagI CCTNNNNNAGG 2 cut(s) 398, 419
XapI RAATTY 4 cut(s) 217, 334, 721, 754
XbaI TCTAGA 1 cut(s) 847
XmaI CCCGGG 1 cut(s) 713
XspI CTAG 2 cut(s) 209, 848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.