RchiOBHm_Chr7g0201391

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
18989633 .. 19005029
15397 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18026

Sequence Viewer

Length: 3078 bp
ATGTCCAGCTTAACAACTTTGGAGGTGTCAAATTGTGATGGTTTAAAATACTTGTTATCATCTTCTATAGCTAGAAGTCTTGTAAAACTCAAAAAGCTCAAGATATCATGTTGTAAGGCCATGGAAGAGATAGTATCAACAAGAGAATCCCAAAATAACATAATTTATAAGCTAGAAATCCTGGAACTGGAAGAACTTCCAAACCTTGCTAGATTCTGCACAGCTGGAAGTTGTATTGAATTTCCATCATTGGAGAGACTGTATATGGAAGATTGTAGTAATAAACTAGGAGAAAGTACTGCAAAAGACACTACATTCCGCAGAGAGATTCAAGAGAGAGAGTTGGATGAGAACTTTCAGGCCCACAATGAGACTTGTAGCCAAAACTTTCTTTTTGACGAAAAGATAAGATCTCCAAGACTGGAGATATTGCAAATCATCAATTACTACGGCATGGACTATAAAAATAGGTTCTCGCAGACCATATGGCACAATCAATTGGATCCAGACTCATTTTGTAGACTCAGAGAAGTCTCTGTGGAAAATTGTGTCAATCTAAGAAGCATTTTTCCACCTAGTATGATGGGAAGATTGAGTGCTTTAGAAACCTTAGACATAAAAGGTTGCGAGTCAATGGAAGTGGTATTTGATGAACGTAGAGAAACTAATGTCAACGAAACACATGGCACATCAACCACTCAGTTGAAAGACGGTCAAAATCTAAAGTCAGTGGATATATACAATTGTCACAGATTGAAATACATTTTTCCCTCATCTATGGTAACTGGTGGTCTTCAACAGCTGCAAAAGATGAAAGCGGGTCGTTGTGATGAAATGGAGAGTGTTGTTGCCAAGGAAGAGGGGACTCTAGAATCAACAAGGCATCCCAACTTTGTGTTCCCAAAAGTTGAATCTATGATTTTTGAATCTATGCAAAGGCTTAAGAGCTTCTATCCCGGAATGTATATTTCTGAGTGGCCCTTGCTCAAACATTTCAAGTTTGAAGGTGAAGTGGAGATTTTTGCTGCAGAACTATCAGTCTTTCAGGAAAAGCAAATGCATGCCCCAACTAAACAACCTTTCTTGCTAATTGATAAGGTTGTGATGCCCATCTTAACAACTTTGGAGGTGTCAAATTGTGATGGTTTAAAATACTTGTTATCATCTTCTATGGCTAGAAGTCTCGTGAAACTCAAACAGCTCAAGATATCAAATTGTAAGGCCATGGAAGAAATAGTATCAACAAGAGAATCCCAAAATAACATAATTTCTAAGCTAGAAATCCTGGAACTGGACGGACTTCCAAACCTTGCTAGATTCTGCACAGCTGGAAGTTGTATTGAATTTCCATCATTGGAGAGACTGTATGTGCGAGGATGTAGTAATAAACTAGGAGAAAGTACTGCAAAAGACACTACATTCCGCAGAGAGATTCAAGAGAGAGAGTTGGACGAGAACTTTCACGCCCACAATGAGACTTCTAGCCAAAACTTTCTTTTTGACGAAAAGATAAGATCTCCAAGATTGGAGATATTGCAAATCATCAATTACTACGGCATGGACTATAAAAATAGGTTCTTGCAGACCATATGGCACAATCAATTGGATCCAGACTCATTTTGCAGACTCAGAGAAGTCTCTGTGGAAAATTGTGTCAATCTAAGAAGCATTTTTCCACCTAGTATGATGGGAAGATTGAGTGCTTTAGAAACCTTAGACATAAAAGGTTGCGAGTCAATGGAAGTGGTATTTGATGAACGTAGAGAAACTAATGTCAACGAAACACATGGCACATCAACCACTCAGTTGAAAGACGGTCAAAATCTAAAGTCAGTGGATATATACAATTGTCACAGATTAAAATACATTTTTCCCGCATCTATGGTAACTGGAGGTCTTCAACAGCTGCAAAAGATGAAAGCGGGTTGTTGTGATGAAATGGAGAGTGTTGTTGCCAAGGAAGAGGGGACTCTAGAATCAACAAGGCATCCCAACTTTGTGTTCCCAAAAGTTAAATCTATGATTTTTGAATTTATGCAAAGGCTTAAGAGCTTCTATCCCGGAATGTATATTTCTGAGTGGCCCTTGCTCAAACATTTCAAGTTTGTACGTGAAGTGGAGATTTTTGCTGCAGAACTATTAGTCTTTCAGGAAAAGCAAATGCATGCCCCAACTAAACAACCTTTCTTGCTAATTCATAAGGGTTCATTCCCCGTCTTGGAAAAATTGGAGGTGTCTACCGCGGAGATTTTGTATGGTCCATCTTCATCCCCAGTAGAGTCGATCTTTAGCAGACTAAAATATATACATTTTTGGAGCTGTAAACAACCCTGCCTCCAGCATGCGGCAGTGCTTTTCCTTCAGAAATTACCTAATCTGGAAGTCCTAGAATTGTACCAGTCTATGGCCAAAATATTTGTGGACGAAAGAAATGGTTGTGGGGAAACTGTAAGAGTTGGGTCCCTCCCACGTGTAAGAGTTCTAGGGCTCTCCTCTGTGGATGTGAGGCATATTGGAATAGAGAACCAACCAGGGGGCCCAGTTTTTCCTAACTTGGAATCTCTTAACGTGAGCCACTGTCTCAGACTAGAGAATTTAGTGTCATCTGCAGTATCCTTCCAGAATCTAACAACGTTGGAAGTACATGGGTGTGATGGATTGAAGTGCTTAGCACCTTCTTCGGTAGCTAAGAGCTTAGTGCAACTCACGAATTTGACGGTGAGATTTTGTAAAGAAATTGTAGTATTAGTGGCAGGCAACGAAGATGAAGATGATGATACAGAAAATGAGATTGCGTTCAGCCGGTTGCAATATTTGACACTTGACCGGCTATATAGTCTACAGGGCTTTTGCTCCCGAAATTGCACTGCCAAACTGCCATTGTCAATCACTGTAGATGTAAACTACTGCCCGATTCAGTTGAAGATTTCCCCTGATGGGGTACCAATAGCAGAAAGCGATGAAAAAATGAAGATGGATTTGGAGATGTACATGGAGCTGGAGATGGAGATCAAGATGCAGATGGAGATGGAGATGCAGACGCATTCGGAGATGGAGATGAGGATGGGATGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1025

Amino Acids

117.59

Weight (kDa)

5.57

Isoelectric Point (pI)

51.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 2 - 94 1e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 158 - 227 1.1e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 235 - 277 3.1e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 368 - 462 1.2e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 524 - 595 3.7e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 603 - 644 6.1e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 872 - 954 3.5e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 168
Acc65I GGTACC 1 cut(s) 2941
AccB1I GGYRCC 1 cut(s) 2941
AccB7I CCANNNNNTGG 1 cut(s) 2404
AccI GTMKAC 3 cut(s) 520, 2237, 2839
AccII CGCG 1 cut(s) 2243
AciI CCGC 8 cut(s) 319, 818, 1423, 1875, 1922, 2241, 2243, 2345
AclI AACGTT 1 cut(s) 2633
AclWI GGATC 4 cut(s) 497, 510, 1601, 1614
AcoI YGGCCR 1 cut(s) 2406
AcsI RAATTY 5 cut(s) 239, 1343, 2030, 2593, 2710
AcuI CTGAAG 1 cut(s) 2345
AcvI CACGTG 1 cut(s) 2471
AfaI GTAC 7 cut(s) 298, 1402, 2109, 2396, 2643, 2943, 2990
AfiI CCNNNNNNNGG 8 cut(s) 187, 1291, 2218, 2344, 2404, 2533, 2937, 2938
AflII CTTAAG 2 cut(s) 941, 2045
AflIII ACRYGT 1 cut(s) 2470
AjnI CCWGG 3 cut(s) 180, 1284, 2530
AjuI GAANNNNNNNTTGG 6 cut(s) 881, 913, 1985, 2017, 2963, 2995
Alw26I GTCTC 8 cut(s) 250, 365, 538, 1187, 1354, 1469, 1642, 2585
AlwI GGATC 4 cut(s) 497, 510, 1601, 1614
AoxI GGCC 7 cut(s) 117, 360, 977, 1221, 2081, 2406, 2536
ApaI GGGCCC 1 cut(s) 2540
ApeKI GCWGC 4 cut(s) 802, 1025, 1906, 2129
ApoI RAATTY 5 cut(s) 239, 1343, 2030, 2593, 2710
Asp700I GAANNNNTTC 1 cut(s) 195
Asp718I GGTACC 1 cut(s) 2941
AspS9I GGNCC 7 cut(s) 361, 978, 2082, 2258, 2460, 2536, 2537
AsuC2I CCSGG 2 cut(s) 957, 2061
AsuHPI GGTGA 2 cut(s) 1019, 2731
AvaII GGWCC 2 cut(s) 2258, 2460
BaeGI GKGCMC 1 cut(s) 2540
BalI TGGCCA 1 cut(s) 2408
BamHI GGATCC 2 cut(s) 502, 1606
BanI GGYRCC 1 cut(s) 2941
BanII GRGCYC 2 cut(s) 2490, 2540
BauI CACGAG 1 cut(s) 1184
BbrPI CACGTG 1 cut(s) 2471
BbsI GAAGAC 2 cut(s) 785, 1889
BbvI GCAGC 4 cut(s) 789, 1012, 1893, 2116
BceAI ACGGC 2 cut(s) 466, 1570
BcgI CGANNNNNNTGC 2 cut(s) 2661, 2695
BciT130I CCWGG 3 cut(s) 182, 1286, 2532
BciVI GTATCC 1 cut(s) 2623
BcnI CCSGG 2 cut(s) 957, 2061
BcoDI GTCTC 8 cut(s) 250, 365, 538, 1187, 1354, 1469, 1642, 2585
BfmI CTRYAG 6 cut(s) 66, 1026, 2130, 2607, 2840, 2892
BfrI CTTAAG 2 cut(s) 941, 2045
BfuI GTATCC 1 cut(s) 2623
BglII AGATCT 2 cut(s) 410, 1514
BisI GCNGC 5 cut(s) 803, 1026, 1907, 2130, 2346
BlpI GCTNAGC 1 cut(s) 2668
BlsI GCNGC 5 cut(s) 804, 1027, 1908, 2131, 2347
BmcAI AGTACT 2 cut(s) 298, 1402
Bme1390I CCNGG 5 cut(s) 182, 957, 1286, 2061, 2532
Bme18I GGWCC 2 cut(s) 2258, 2460
BmgT120I GGNCC 7 cut(s) 361, 978, 2082, 2258, 2460, 2536, 2537
BmiI GGNNCC 7 cut(s) 504, 1608, 2461, 2462, 2537, 2538, 2943
BmrFI CCNGG 5 cut(s) 182, 957, 1286, 2061, 2532
BmrI ACTGGG 2 cut(s) 2267, 2534
BmsI GCATC 6 cut(s) 892, 1095, 1886, 1996, 3006, 3024
BmuI ACTGGG 2 cut(s) 2267, 2534
BpiI GAAGAC 2 cut(s) 785, 1889
BpmI CTGGAG 4 cut(s) 443, 1911, 2321, 3020
Bpu1102I GCTNAGC 1 cut(s) 2668
BpuEI CTTGAG 2 cut(s) 83, 1187
BpuMI CCSGG 2 cut(s) 957, 2061
BsaAI YACGTR 2 cut(s) 2111, 2471
BsaBI GATNNNNATC 2 cut(s) 1109, 3008
BsaJI CCNNGG 6 cut(s) 120, 852, 1224, 1956, 2241, 2531
BsaXI ACNNNNNCTCC 8 cut(s) 245, 275, 1349, 1379, 2237, 2267, 2319, 2349
Bsc4I CCNNNNNNNGG 8 cut(s) 187, 1291, 2218, 2344, 2404, 2533, 2937, 2938
Bse118I RCCGGY 2 cut(s) 2802, 2826
Bse1I ACTGG 8 cut(s) 192, 426, 790, 1296, 1894, 2273, 2398, 2540
Bse8I GATNNNNATC 2 cut(s) 1109, 3008
BseBI CCWGG 3 cut(s) 182, 1286, 2532
BseDI CCNNGG 6 cut(s) 120, 852, 1224, 1956, 2241, 2531
BseGI GGATG 8 cut(s) 352, 883, 1382, 1987, 2267, 2506, 3069, 3074
BseJI GATNNNNATC 2 cut(s) 1109, 3008
BseLI CCNNNNNNNGG 8 cut(s) 187, 1291, 2218, 2344, 2404, 2533, 2937, 2938
BseMII CTCAG 7 cut(s) 538, 713, 963, 1642, 1817, 2067, 2596
BseNI ACTGG 8 cut(s) 192, 426, 790, 1296, 1894, 2273, 2398, 2540
BseRI GAGGAG 1 cut(s) 2482
BseSI GKGCMC 1 cut(s) 2540
BseXI GCAGC 4 cut(s) 789, 1012, 1893, 2116
BsgI GTGCAG 2 cut(s) 202, 1306
Bsh1236I CGCG 1 cut(s) 2243
BshFI GGCC 7 cut(s) 119, 362, 979, 1223, 2083, 2408, 2538
BshNI GGYRCC 1 cut(s) 2941
BsiSI CCGG 4 cut(s) 957, 2061, 2803, 2827
BslFI GGGAC 3 cut(s) 877, 1981, 2446
BslI CCNNNNNNNGG 8 cut(s) 187, 1291, 2218, 2344, 2404, 2533, 2937, 2938
BsmAI GTCTC 8 cut(s) 250, 365, 538, 1187, 1354, 1469, 1642, 2585
BsmFI GGGAC 3 cut(s) 877, 1981, 2446
BsmI GAATGC 1 cut(s) 3043
BsnI GGCC 7 cut(s) 119, 362, 979, 1223, 2083, 2408, 2538
Bsp120I GGGCCC 1 cut(s) 2536
Bsp1286I GDGCHC 2 cut(s) 2490, 2540
Bsp1407I TGTACA 1 cut(s) 2988
Bsp143I GATC 6 cut(s) 410, 502, 1514, 1606, 2283, 3009
Bsp1720I GCTNAGC 1 cut(s) 2668
Bsp19I CCATGG 2 cut(s) 120, 1224
BspACI CCGC 8 cut(s) 319, 818, 1423, 1875, 1922, 2241, 2243, 2345
BspANI GGCC 7 cut(s) 119, 362, 979, 1223, 2083, 2408, 2538
BspCNI CTCAG 7 cut(s) 537, 712, 964, 1641, 1816, 2068, 2595
BspFNI CGCG 1 cut(s) 2243
BspLI GGNNCC 7 cut(s) 504, 1608, 2461, 2462, 2537, 2538, 2943
BspMAI CTGCAG 3 cut(s) 1030, 2134, 2611
BspPI GGATC 4 cut(s) 497, 510, 1601, 1614
BspT107I GGYRCC 1 cut(s) 2941
BspTI CTTAAG 2 cut(s) 941, 2045
BsrFI RCCGGY 2 cut(s) 2802, 2826
BsrGI TGTACA 1 cut(s) 2988
BsrI ACTGG 8 cut(s) 192, 426, 790, 1296, 1894, 2273, 2398, 2540
BssAI RCCGGY 2 cut(s) 2802, 2826
BssECI CCNNGG 6 cut(s) 120, 852, 1224, 1956, 2241, 2531
BssMI GATC 6 cut(s) 410, 502, 1514, 1606, 2283, 3009
BssSI CACGAG 1 cut(s) 1184
BssT1I CCWWGG 4 cut(s) 120, 852, 1224, 1956
Bst2BI CACGAG 1 cut(s) 1184
Bst2UI CCWGG 3 cut(s) 182, 1286, 2532
Bst4CI ACNGT 8 cut(s) 261, 713, 1365, 1817, 2449, 2579, 2719, 2893
Bst6I CTCTTC 3 cut(s) 120, 852, 1956
BstAFI CTTAAG 2 cut(s) 941, 2045
BstAUI TGTACA 1 cut(s) 2988
BstBAI YACGTR 2 cut(s) 2111, 2471
BstC8I GCNNGC 4 cut(s) 1062, 2166, 2343, 2755
BstDSI CCRYGG 3 cut(s) 120, 1224, 2241
BstF5I GGATG 8 cut(s) 352, 883, 1382, 1987, 2267, 2506, 3069, 3074
BstFNI CGCG 1 cut(s) 2243
BstKTI GATC 6 cut(s) 413, 505, 1517, 1609, 2286, 3012
BstMAI GTCTC 8 cut(s) 250, 365, 538, 1187, 1354, 1469, 1642, 2585
BstMBI GATC 6 cut(s) 410, 502, 1514, 1606, 2283, 3009
BstNI CCWGG 3 cut(s) 182, 1286, 2532
BstNSI RCATGY 3 cut(s) 1064, 2168, 2345
BstSCI CCNGG 5 cut(s) 180, 955, 1284, 2059, 2530
BstSFI CTRYAG 6 cut(s) 66, 1026, 2130, 2607, 2840, 2892
BstSLI GKGCMC 1 cut(s) 2540
BstUI CGCG 1 cut(s) 2243
BstV1I GCAGC 4 cut(s) 789, 1012, 1893, 2116
BstV2I GAAGAC 2 cut(s) 785, 1889
BstX2I RGATCY 4 cut(s) 410, 502, 1514, 1606
BstYI RGATCY 4 cut(s) 410, 502, 1514, 1606
BsuI GTATCC 1 cut(s) 2623
BsuRI GGCC 7 cut(s) 119, 362, 979, 1223, 2083, 2408, 2538
BtgI CCRYGG 3 cut(s) 120, 1224, 2241
BtgZI GCGATG 1 cut(s) 2973
BtsCI GGATG 8 cut(s) 352, 883, 1382, 1987, 2267, 2506, 3069, 3074
BtsI GCAGTG 2 cut(s) 2355, 2865
BtsIMutI CAGTG 6 cut(s) 735, 1839, 2355, 2575, 2865, 2889
Cac8I GCNNGC 4 cut(s) 1062, 2166, 2343, 2755
Cfr10I RCCGGY 2 cut(s) 2802, 2826
Cfr13I GGNCC 7 cut(s) 361, 978, 2082, 2258, 2460, 2536, 2537
Cfr42I CCGCGG 1 cut(s) 2244
CseI GACGC 1 cut(s) 3049
Csp6I GTAC 7 cut(s) 297, 1401, 2108, 2395, 2642, 2942, 2989
CspCI CAANNNNNGTGG 4 cut(s) 621, 656, 1725, 1760
CviQI GTAC 7 cut(s) 297, 1401, 2108, 2395, 2642, 2942, 2989
DpnI GATC 6 cut(s) 412, 504, 1516, 1608, 2285, 3011
DpnII GATC 6 cut(s) 410, 502, 1514, 1606, 2283, 3009
DraI TTTAAA 2 cut(s) 45, 1149
EaeI YGGCCR 1 cut(s) 2406
Eam1104I CTCTTC 3 cut(s) 120, 852, 1956
EarI CTCTTC 3 cut(s) 120, 852, 1956
Eco130I CCWWGG 4 cut(s) 120, 852, 1224, 1956
Eco24I GRGCYC 2 cut(s) 2490, 2540
Eco32I GATATC 2 cut(s) 105, 1209
Eco47I GGWCC 2 cut(s) 2258, 2460
Eco57I CTGAAG 1 cut(s) 2345
Eco72I CACGTG 1 cut(s) 2471
EcoO109I RGGNCCY 2 cut(s) 2460, 2536
EcoRII CCWGG 3 cut(s) 180, 1284, 2530
EcoRV GATATC 2 cut(s) 105, 1209
EcoT14I CCWWGG 4 cut(s) 120, 852, 1224, 1956
EcoT22I ATGCAT 2 cut(s) 1062, 2166
EcoT38I GRGCYC 2 cut(s) 2490, 2540
ErhI CCWWGG 4 cut(s) 120, 852, 1224, 1956
FaqI GGGAC 3 cut(s) 877, 1981, 2446
FauI CCCGC 3 cut(s) 811, 1882, 1915
FauNDI CATATG 2 cut(s) 485, 1589
FblI GTMKAC 3 cut(s) 520, 2237, 2839
Fnu4HI GCNGC 5 cut(s) 803, 1026, 1907, 2130, 2346
FokI GGATG 6 cut(s) 359, 870, 1389, 1974, 2254, 2513
FriOI GRGCYC 2 cut(s) 2490, 2540
Fsp4HI GCNGC 5 cut(s) 803, 1026, 1907, 2130, 2346
GluI GCNGC 5 cut(s) 803, 1026, 1907, 2130, 2346
GsuI CTGGAG 4 cut(s) 443, 1911, 2321, 3020
HaeIII GGCC 7 cut(s) 119, 362, 979, 1223, 2083, 2408, 2538
HapII CCGG 4 cut(s) 957, 2061, 2803, 2827
HgaI GACGC 1 cut(s) 3049
HincII GTYRAC 2 cut(s) 673, 1777
HindII GTYRAC 2 cut(s) 673, 1777
HpaII CCGG 4 cut(s) 957, 2061, 2803, 2827
HphI GGTGA 2 cut(s) 1019, 2731
Hpy166II GTNNAC 8 cut(s) 521, 673, 1777, 2238, 2324, 2422, 2840, 2902
Hpy188I TCNGA 7 cut(s) 527, 973, 1631, 2077, 2364, 2585, 3049
Hpy8I GTNNAC 8 cut(s) 521, 673, 1777, 2238, 2324, 2422, 2840, 2902
HpyAV CCTTC 4 cut(s) 998, 2369, 2626, 2685
HpyCH4III ACNGT 8 cut(s) 261, 713, 1365, 1817, 2449, 2579, 2719, 2893
HpyCH4IV ACGT 6 cut(s) 655, 1759, 2110, 2470, 2568, 2633
HpySE526I ACGT 6 cut(s) 655, 1759, 2110, 2470, 2568, 2633
KflI GGGWCCC 1 cut(s) 2460
KpnI GGTACC 1 cut(s) 2945
KspI CCGCGG 1 cut(s) 2244
Kzo9I GATC 6 cut(s) 410, 502, 1514, 1606, 2283, 3009
LmnI GCTCC 3 cut(s) 2316, 2858, 2995
Lsp1109I GCAGC 4 cut(s) 789, 1012, 1893, 2116
LweI GCATC 6 cut(s) 892, 1095, 1886, 1996, 3006, 3024
MaeII ACGT 6 cut(s) 655, 1759, 2110, 2470, 2568, 2633
MaeIII GTNAC 4 cut(s) 746, 781, 1850, 1885
MalI GATC 6 cut(s) 412, 504, 1516, 1608, 2285, 3011
MboI GATC 6 cut(s) 410, 502, 1514, 1606, 2283, 3009
MfeI CAATTG 4 cut(s) 497, 742, 1601, 1846
MflI RGATCY 4 cut(s) 410, 502, 1514, 1606
MhlI GDGCHC 2 cut(s) 2490, 2540
MlsI TGGCCA 1 cut(s) 2408
MluNI TGGCCA 1 cut(s) 2408
MlyI GAGTC 9 cut(s) 503, 516, 638, 859, 1607, 1620, 1742, 1963, 2288
MmeI TCCRAC 3 cut(s) 324, 1428, 2616
Mox20I TGGCCA 1 cut(s) 2408
Mph1103I ATGCAT 2 cut(s) 1062, 2166
MroXI GAANNNNTTC 1 cut(s) 195
MscI TGGCCA 1 cut(s) 2408
MseI TTAA 9 cut(s) 11, 44, 942, 1115, 1148, 1859, 2013, 2046, 2565
MslI CAYNNNNRTG 1 cut(s) 2649
Msp20I TGGCCA 1 cut(s) 2408
MspA1I CMGCKG 5 cut(s) 224, 802, 1328, 1906, 2243
MspCI CTTAAG 2 cut(s) 941, 2045
MspI CCGG 4 cut(s) 957, 2061, 2803, 2827
MspR9I CCNGG 5 cut(s) 182, 957, 1286, 2061, 2532
MunI CAATTG 4 cut(s) 497, 742, 1601, 1846
Mva1269I GAATGC 1 cut(s) 3043
MvaI CCWGG 3 cut(s) 182, 1286, 2532
MvnI CGCG 1 cut(s) 2243
NciI CCSGG 2 cut(s) 957, 2061
NcoI CCATGG 2 cut(s) 120, 1224
NdeI CATATG 2 cut(s) 485, 1589
NdeII GATC 6 cut(s) 410, 502, 1514, 1606, 2283, 3009
NlaIV GGNNCC 7 cut(s) 504, 1608, 2461, 2462, 2537, 2538, 2943
NmuCI GTSAC 2 cut(s) 746, 1850
NsiI ATGCAT 2 cut(s) 1062, 2166
NspI RCATGY 3 cut(s) 1064, 2168, 2345
PaeI GCATGC 3 cut(s) 1064, 2168, 2345
PctI GAATGC 1 cut(s) 3043
PdmI GAANNNNTTC 1 cut(s) 195
PflMI CCANNNNNTGG 1 cut(s) 2404
PfoI TCCNGGA 4 cut(s) 180, 955, 1284, 2059
PkrI GCNGC 5 cut(s) 804, 1027, 1908, 2131, 2347
PleI GAGTC 9 cut(s) 503, 516, 637, 859, 1607, 1620, 1741, 1963, 2287
PmaCI CACGTG 1 cut(s) 2471
PmlI CACGTG 1 cut(s) 2471
PpsI GAGTC 9 cut(s) 503, 516, 637, 859, 1607, 1620, 1741, 1963, 2287
Ppu21I YACGTR 2 cut(s) 2111, 2471
PpuMI RGGWCCY 1 cut(s) 2460
PsiI TTATAA 1 cut(s) 168
Psp1406I AACGTT 1 cut(s) 2633
Psp5II RGGWCCY 1 cut(s) 2460
Psp6I CCWGG 3 cut(s) 180, 1284, 2530
PspCI CACGTG 1 cut(s) 2471
PspGI CCWGG 3 cut(s) 180, 1284, 2530
PspN4I GGNNCC 7 cut(s) 504, 1608, 2461, 2462, 2537, 2538, 2943
PspOMI GGGCCC 1 cut(s) 2536
PspPI GGNCC 7 cut(s) 361, 978, 2082, 2258, 2460, 2536, 2537
PspPPI RGGWCCY 1 cut(s) 2460
PstI CTGCAG 3 cut(s) 1030, 2134, 2611
PsuI RGATCY 4 cut(s) 410, 502, 1514, 1606
PvuII CAGCTG 4 cut(s) 224, 802, 1328, 1906
RsaI GTAC 7 cut(s) 298, 1402, 2109, 2396, 2643, 2943, 2990
RsaNI GTAC 7 cut(s) 297, 1401, 2108, 2395, 2642, 2942, 2989
RseI CAYNNNNRTG 1 cut(s) 2649
SacII CCGCGG 1 cut(s) 2244
SaqAI TTAA 9 cut(s) 11, 44, 942, 1115, 1148, 1859, 2013, 2046, 2565
SatI GCNGC 5 cut(s) 803, 1026, 1907, 2130, 2346
Sau3AI GATC 6 cut(s) 410, 502, 1514, 1606, 2283, 3009
Sau96I GGNCC 7 cut(s) 361, 978, 2082, 2258, 2460, 2536, 2537
ScaI AGTACT 2 cut(s) 298, 1402
SchI GAGTC 9 cut(s) 503, 516, 638, 859, 1607, 1620, 1742, 1963, 2288
ScrFI CCNGG 5 cut(s) 182, 957, 1286, 2061, 2532
SduI GDGCHC 2 cut(s) 2490, 2540
SfaNI GCATC 6 cut(s) 892, 1095, 1886, 1996, 3006, 3024
SfcI CTRYAG 6 cut(s) 66, 1026, 2130, 2607, 2840, 2892
Sfr303I CCGCGG 1 cut(s) 2244
SgrBI CCGCGG 1 cut(s) 2244
SinI GGWCC 2 cut(s) 2258, 2460
SmiMI CAYNNNNRTG 1 cut(s) 2649
SmlI CTYRAG 4 cut(s) 98, 941, 1202, 2045
SmoI CTYRAG 4 cut(s) 98, 941, 1202, 2045
SphI GCATGC 3 cut(s) 1064, 2168, 2345
SsiI CCGC 8 cut(s) 319, 818, 1423, 1875, 1922, 2241, 2243, 2345
SspI AATATT 2 cut(s) 2415, 2813
StyD4I CCNGG 5 cut(s) 180, 955, 1284, 2059, 2530
StyI CCWWGG 4 cut(s) 120, 852, 1224, 1956
TaaI ACNGT 8 cut(s) 261, 713, 1365, 1817, 2449, 2579, 2719, 2893
TaiI ACGT 6 cut(s) 658, 1762, 2113, 2473, 2571, 2636
TaqI TCGA 1 cut(s) 2282
TatI WGTACW 4 cut(s) 296, 1400, 2641, 2988
TauI GCSGC 1 cut(s) 2348
Tru1I TTAA 9 cut(s) 11, 44, 942, 1115, 1148, 1859, 2013, 2046, 2565
Tru9I TTAA 9 cut(s) 11, 44, 942, 1115, 1148, 1859, 2013, 2046, 2565
TscAI CASTG 6 cut(s) 735, 1839, 2355, 2582, 2872, 2896
TseFI GTSAC 2 cut(s) 746, 1850
TseI GCWGC 4 cut(s) 802, 1025, 1906, 2129
Tsp45I GTSAC 2 cut(s) 746, 1850
TspGWI ACGGA 1 cut(s) 1311
TspRI CASTG 6 cut(s) 735, 1839, 2355, 2582, 2872, 2896
Van91I CCANNNNNTGG 1 cut(s) 2404
Vha464I CTTAAG 2 cut(s) 941, 2045
VpaK11BI GGWCC 2 cut(s) 2258, 2460
XapI RAATTY 5 cut(s) 239, 1343, 2030, 2593, 2710
XbaI TCTAGA 2 cut(s) 868, 1972
XceI RCATGY 3 cut(s) 1064, 2168, 2345
XcmI CCANNNNNNNNNTGG 1 cut(s) 2416
XmiI GTMKAC 3 cut(s) 520, 2237, 2839
XmnI GAANNNNTTC 1 cut(s) 195
ZrmI AGTACT 2 cut(s) 298, 1402
Zsp2I ATGCAT 2 cut(s) 1062, 2166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.