Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0002032

Physical Location & Seq

Genomic Coordinates Forward (+)

17902435 .. 17905557

Gene Structure 3123 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG201300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGCCGCAAACACCGCCTCCGTCCAACCGGGTCGGTTTCGGGTCCTAAAGCAAGGGGCCAAACCGGTCGACCCGAATCCGGGTCCCGTGGTTTACTGGATGTTCAGAGACCAACGGGTCAAAGACAACTGGGCGTTGATCCACGCCGTTGAAGAGGCCAACAAGGCCCATGTCCCTGTCGCCGTCGCGTTCAATTTGTTCGATCAATTTCTTGGCGCCAAAGCCCGCCATTTAGGGTTTATGCTGAGAGGCTTGCGACAATTGCATCCTGATCTTGAAGAATCGCATCAGATTCCATTTTTTCTTGTCCGGGGAGAAGCGGAGGAGACTATACCCAATTTTGTGAGGGAATGCGGTGCTTCACTTTTAGTAACAGATTTTTCGCCTTTAAGGGAGGTTCAGAAATGTAAAGAGGAAATATGCAAGAGGGTTAGTGATTTTGTGACCATACATGAAGTTGATGCCCACAATGTGGTGCCCGTTTGGGCGGCATCGGAGAAGTTGGAGTATAGTGCTAGGACTATAAGGAGTAAGATCAATAAAAGGCTGCCTGAGTACCTTATTGAATTTCCTACTCTGCAGCCACCAATTGCAAAATGGGTGGGCACAAGTCCGGCAATTGATTGGGATGGTCTTATTGATGAAGTTTTAAGGAAAGGAGCAGAAGTTCCTGAAGTTGACTGGTGCAAACCAGGAGAAAAGGCAGCAATGGAAGTTTTGATGGGTAGCAAAAATGGATTCTTGACAAAAAGGTTGAAGGGTTATTCATCAGACCGGAATAACCCTTTGAAACCAAGAGGGGCGTCTGGTCTTTCTCCATATTTGCATTTTGGGCAAATATCTGCACAGAGGTGTGCCTTGGAGGCACGCAGCGTCAGGAAACTCAGTCCCCTGGCAGTGGATGCATTTTTAGAGGAGTTGATTGTGCGCAGAGAACTTGCTGACAACTACTGCTTCTACCAGCCTCAATATGATTCATTGCAAGGGGCATGGGAATGGGCACGTAAGACCTTAATGGACCATGCTTCAGATAAGCGAGAACATATTTACACGAGGGAGCAATTGGAGAAGGCACAAACAGCTGATCCTCTCTGGAATGCCTCCCAATTGGAGATGGTTCATTACGGGAAGATGCATGGTTTTATGCGGATGTATTGGGCCAAAAAGATCCTTGAGTGGACAAGAGGACCTGAAGAGGCCCTTGAAATATCCATATATTTAAATAACAGGGTATGCAAAGATGGAAGGGATCCGAATGGATATGTTGGTTGCATGTGGTCAATATGCGGTGTTCACGACCAGGGTTGGAAGGAACGACCAATTTTTGGGAAAATACGCTATATGAACCATGCAGGCTGCAAACGGAAATTTGACGTGGATGGATACATTTCCTATGTGAAGAGGCTTGGTGCAAGCAAGAAGAGAAAAAGCGAGAAGGAAATCAAATTAACGTTCATCTCAATCTCCTTCTCCAATGTCAGAGACAAATATAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000719 GO:0003674 GO:0003824 GO:0003904 GO:0003913 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006290 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0016829 GO:0016830 GO:0033554 GO:0034641 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051716 GO:0071704 GO:0071949 GO:0090304 GO:0097159 GO:0140097 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_photolyase

Protein Analysis

498

Amino Acids

57.18

Weight (kDa)

9.11

Isoelectric Point (pI)

37.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_photolyase	PF00875	30 - 192	5.1e-30	DNA photolyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12370 AT1G12370 AT1G12370
fragaria_vesca	FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790
malus_domestica	MD04G1078900.v1.1
prunus_persica	Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1
pyrus_communis	pycom04g07070
rosa_chinensis	RchiOBHm_Chr7g0201341 RchiOBHm_Chr7g0201371 RchiOBHm_Chr7g0201391
rosa_laevigata	RLG00000003679
rosa_multiflora	Rmu_co8093880.1_g000001 Rmu_co8322589.1_g000001 Rmu_sc0001469.1_g000010 Rmu_sc0001469.1_g000012 Rmu_sc0013971.1_g000001 Rmu_sc0013971.1_g000004 Rmu_sc0024878.1_g000001 Rmu_sc0024878.1_g000004 Rmu_sc0026181.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226330 Rroxscaffold_3G00255330 Rroxscaffold_3G00255340 Rroxscaffold_3G00255350
rosa_rugosa	Rorug07G0062600 Rorug07G0062700
rosa_samantha	Rh7AG190200 Rh7BG192600 Rh7CG200900 Rh7CG201300 Rh7CG201400 Rh7CG201500 Rh7DG195000 Rh7DG195200
rosa_wichuraiana	Rw7G016680 Rw7G016690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	116
Acc16I	TGCGCA	1 cut(s)	929
AccB1I	GGYRCC	2 cut(s)	215, 475
AccB7I	CCANNNNNTGG	2 cut(s)	472, 1325
AccI	GTMKAC	1 cut(s)	69
AccII	CGCG	1 cut(s)	188
AciI	CCGC	8 cut(s)	6, 15, 226, 320, 354, 488, 1147, 1287
AclI	AACGTT	1 cut(s)	1451
AclWI	GGATC	5 cut(s)	133, 1079, 1162, 1244, 1257
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	566, 1367
AcuI	CTGAAG	3 cut(s)	693, 1011, 1212
AcyI	GRCGYC	2 cut(s)	216, 803
AdeI	CACNNNGTG	1 cut(s)	472
AfaI	GTAC	1 cut(s)	557
AfiI	CCNNNNNNNGG	5 cut(s)	79, 80, 472, 898, 1325
AgeI	ACCGGT	1 cut(s)	64
AgsI	TTSAA	7 cut(s)	152, 193, 278, 566, 757, 790, 1205
AjiI	CACGTC	1 cut(s)	1375
AjnI	CCWGG	3 cut(s)	691, 891, 1299
AleI	CACNNNNGTG	1 cut(s)	850
AloI	GAACNNNNNNTCC	2 cut(s)	651, 683
AluBI	AGCT	1 cut(s)	1082
AluI	AGCT	1 cut(s)	1082
Alw26I	GTCTC	3 cut(s)	102, 320, 1476
AlwI	GGATC	5 cut(s)	133, 1079, 1162, 1244, 1257
AoxI	GGCC	6 cut(s)	3, 57, 156, 165, 1158, 1197
ApeKI	GCWGC	5 cut(s)	547, 580, 704, 870, 1356
ApoI	RAATTY	2 cut(s)	566, 1367
AsiGI	ACCGGT	1 cut(s)	64
AspLEI	GCGC	2 cut(s)	218, 930
AspS9I	GGNCC	8 cut(s)	43, 57, 83, 166, 1018, 1158, 1187, 1198
AsuC2I	CCSGG	3 cut(s)	30, 81, 311
AvaII	GGWCC	4 cut(s)	43, 83, 1018, 1187
BaeGI	GKGCMC	3 cut(s)	480, 608, 1003
BamHI	GGATCC	1 cut(s)	1249
BanI	GGYRCC	2 cut(s)	215, 475
BauI	CACGAG	1 cut(s)	1051
BbvI	GCAGC	5 cut(s)	534, 592, 716, 882, 1343
BccI	CCATC	5 cut(s)	623, 715, 1108, 1235, 1373
BceAI	ACGGC	2 cut(s)	131, 167
BciT130I	CCWGG	3 cut(s)	693, 893, 1301
BciVI	GTATCC	1 cut(s)	1376
BcnI	CCSGG	3 cut(s)	30, 81, 311
BcoDI	GTCTC	3 cut(s)	102, 320, 1476
BfaI	CTAG	1 cut(s)	516
BfmI	CTRYAG	1 cut(s)	578
BfoI	RGCGCY	1 cut(s)	219
BfuI	GTATCC	1 cut(s)	1376
BglI	GCCNNNNNGGC	2 cut(s)	164, 863
BisI	GCNGC	7 cut(s)	6, 489, 548, 581, 705, 871, 1357
BlsI	GCNGC	7 cut(s)	7, 490, 549, 582, 706, 872, 1358
Bme1390I	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1301
Bme18I	GGWCC	4 cut(s)	43, 83, 1018, 1187
BmgBI	CACGTC	1 cut(s)	1375
BmgT120I	GGNCC	8 cut(s)	43, 57, 83, 166, 1018, 1158, 1187, 1198
BmiI	GGNNCC	7 cut(s)	44, 58, 84, 85, 217, 477, 1251
BmrFI	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1301
BmrI	ACTGGG	1 cut(s)	139
BmsI	GCATC	6 cut(s)	274, 295, 451, 500, 892, 1122
BmuI	ACTGGG	1 cut(s)	139
BpuEI	CTTGAG	1 cut(s)	1193
BpuMI	CCSGG	3 cut(s)	30, 81, 311
BsaAI	YACGTR	1 cut(s)	1004
BsaHI	GRCGYC	2 cut(s)	216, 803
BsaI	GGTCTC	1 cut(s)	102
BsaJI	CCNNGG	5 cut(s)	87, 310, 858, 891, 1300
BsaWI	WCCGGW	2 cut(s)	64, 774
BsaXI	ACNNNNNCTCC	3 cut(s)	32, 651, 681
Bsc4I	CCNNNNNNNGG	5 cut(s)	79, 80, 472, 898, 1325
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	3 cut(s)	101, 134, 686
Bse3DI	GCAATG	2 cut(s)	714, 977
BseBI	CCWGG	3 cut(s)	693, 893, 1301
BseDI	CCNNGG	5 cut(s)	87, 310, 858, 891, 1300
BseGI	GGATG	6 cut(s)	105, 265, 634, 907, 1155, 1384
BseLI	CCNNNNNNNGG	5 cut(s)	79, 80, 472, 898, 1325
BseMI	GCAATG	2 cut(s)	714, 977
BseMII	CTCAG	3 cut(s)	236, 543, 898
BseNI	ACTGG	3 cut(s)	101, 134, 686
BseRI	GAGGAG	2 cut(s)	338, 929
BseSI	GKGCMC	3 cut(s)	480, 608, 1003
BseXI	GCAGC	5 cut(s)	534, 592, 716, 882, 1343
BsgI	GTGCAG	1 cut(s)	828
Bsh1236I	CGCG	1 cut(s)	188
Bsh1285I	CGRYCG	1 cut(s)	69
BshFI	GGCC	6 cut(s)	5, 59, 158, 167, 1160, 1199
BshNI	GGYRCC	2 cut(s)	215, 475
BshTI	ACCGGT	1 cut(s)	64
BsiEI	CGRYCG	1 cut(s)	69
BsiSI	CCGG	6 cut(s)	29, 65, 80, 310, 614, 775
BslFI	GGGAC	3 cut(s)	69, 158, 873
BslI	CCNNNNNNNGG	5 cut(s)	79, 80, 472, 898, 1325
BsmAI	GTCTC	3 cut(s)	102, 320, 1476
BsmFI	GGGAC	3 cut(s)	69, 158, 873
BsmI	GAATGC	2 cut(s)	356, 1102
BsnI	GGCC	6 cut(s)	5, 59, 158, 167, 1160, 1199
Bso31I	GGTCTC	1 cut(s)	102
Bsp1286I	GDGCHC	3 cut(s)	480, 608, 1003
Bsp143I	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
BspACI	CCGC	8 cut(s)	6, 15, 226, 320, 354, 488, 1147, 1287
BspANI	GGCC	6 cut(s)	5, 59, 158, 167, 1160, 1199
BspCNI	CTCAG	3 cut(s)	237, 544, 897
BspFNI	CGCG	1 cut(s)	188
BspLI	GGNNCC	7 cut(s)	44, 58, 84, 85, 217, 477, 1251
BspMAI	CTGCAG	1 cut(s)	582
BspPI	GGATC	5 cut(s)	133, 1079, 1162, 1244, 1257
BspT107I	GGYRCC	2 cut(s)	215, 475
BspTNI	GGTCTC	1 cut(s)	102
BsrDI	GCAATG	2 cut(s)	714, 977
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	3 cut(s)	101, 134, 686
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	5 cut(s)	87, 310, 858, 891, 1300
BssMI	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
BssNI	GRCGYC	2 cut(s)	216, 803
BssSI	CACGAG	1 cut(s)	1051
BssT1I	CCWWGG	1 cut(s)	858
Bst2BI	CACGAG	1 cut(s)	1051
Bst2UI	CCWGG	3 cut(s)	693, 893, 1301
Bst6I	CTCTTC	4 cut(s)	147, 1188, 1394, 1415
BstACI	GRCGYC	2 cut(s)	216, 803
BstAPI	GCANNNNNTGC	1 cut(s)	902
BstBAI	YACGTR	1 cut(s)	1004
BstC8I	GCNNGC	5 cut(s)	226, 254, 868, 1354, 1414
BstDEI	CTNAG	3 cut(s)	245, 552, 884
BstDSI	CCRYGG	1 cut(s)	87
BstF5I	GGATG	6 cut(s)	105, 265, 634, 907, 1155, 1384
BstFNI	CGCG	1 cut(s)	188
BstH2I	RGCGCY	1 cut(s)	219
BstHHI	GCGC	2 cut(s)	218, 930
BstKTI	GATC	7 cut(s)	141, 205, 274, 537, 1087, 1170, 1252
BstMAI	GTCTC	3 cut(s)	102, 320, 1476
BstMBI	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
BstMCI	CGRYCG	1 cut(s)	69
BstMWI	GCNNNNNNNGC	7 cut(s)	14, 164, 262, 832, 863, 902, 1079
BstNI	CCWGG	3 cut(s)	693, 893, 1301
BstNSI	RCATGY	1 cut(s)	1276
BstSCI	CCNGG	6 cut(s)	28, 79, 309, 691, 891, 1299
BstSFI	CTRYAG	1 cut(s)	578
BstSLI	GKGCMC	3 cut(s)	480, 608, 1003
BstUI	CGCG	1 cut(s)	188
BstV1I	GCAGC	5 cut(s)	534, 592, 716, 882, 1343
BstX2I	RGATCY	2 cut(s)	1167, 1249
BstYI	RGATCY	2 cut(s)	1167, 1249
BsuI	GTATCC	1 cut(s)	1376
BsuRI	GGCC	6 cut(s)	5, 59, 158, 167, 1160, 1199
BtgI	CCRYGG	1 cut(s)	87
BtrI	CACGTC	1 cut(s)	1375
BtsCI	GGATG	6 cut(s)	105, 265, 634, 907, 1155, 1384
BtsI	GCAGTG	1 cut(s)	903
BtsIMutI	CAGTG	1 cut(s)	903
Cac8I	GCNNGC	5 cut(s)	226, 254, 868, 1354, 1414
CfoI	GCGC	2 cut(s)	218, 930
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	8 cut(s)	43, 57, 83, 166, 1018, 1158, 1187, 1198
CseI	GACGC	2 cut(s)	792, 862
Csp6I	GTAC	1 cut(s)	556
CspAI	ACCGGT	1 cut(s)	64
CspCI	CAANNNNNGTGG	2 cut(s)	582, 617
CviAII	CATG	7 cut(s)	170, 452, 990, 1022, 1136, 1273, 1349
CviQI	GTAC	1 cut(s)	556
DdeI	CTNAG	3 cut(s)	245, 552, 884
DinI	GGCGCC	1 cut(s)	217
DpnI	GATC	7 cut(s)	140, 204, 273, 536, 1086, 1169, 1251
DpnII	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
DraI	TTTAAA	1 cut(s)	1221
DraIII	CACNNNGTG	1 cut(s)	472
DrdI	GACNNNNNNGTC	1 cut(s)	116
DseDI	GACNNNNNNGTC	1 cut(s)	116
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	147, 1188, 1394, 1415
EarI	CTCTTC	4 cut(s)	147, 1188, 1394, 1415
Eco130I	CCWWGG	1 cut(s)	858
Eco31I	GGTCTC	1 cut(s)	102
Eco47I	GGWCC	4 cut(s)	43, 83, 1018, 1187
Eco57I	CTGAAG	3 cut(s)	693, 1011, 1212
EcoO109I	RGGNCCY	4 cut(s)	43, 83, 1187, 1198
EcoRII	CCWGG	3 cut(s)	691, 891, 1299
EcoT14I	CCWWGG	1 cut(s)	858
EcoT22I	ATGCAT	2 cut(s)	907, 1137
EgeI	GGCGCC	1 cut(s)	217
EheI	GGCGCC	1 cut(s)	217
ErhI	CCWWGG	1 cut(s)	858
FaeI	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1352
FalI	AAGNNNNNCTT	2 cut(s)	1185, 1217
FaqI	GGGAC	3 cut(s)	69, 158, 873
FatI	CATG	7 cut(s)	169, 451, 989, 1021, 1135, 1272, 1348
FauI	CCCGC	1 cut(s)	233
FblI	GTMKAC	1 cut(s)	69
Fnu4HI	GCNGC	7 cut(s)	6, 489, 548, 581, 705, 871, 1357
FokI	GGATG	6 cut(s)	112, 252, 641, 914, 1162, 1391
Fsp4HI	GCNGC	7 cut(s)	6, 489, 548, 581, 705, 871, 1357
FspBI	CTAG	1 cut(s)	516
FspI	TGCGCA	1 cut(s)	929
GlaI	GCGC	2 cut(s)	217, 929
GluI	GCNGC	7 cut(s)	6, 489, 548, 581, 705, 871, 1357
HaeII	RGCGCY	1 cut(s)	219
HaeIII	GGCC	6 cut(s)	5, 59, 158, 167, 1160, 1199
HapII	CCGG	6 cut(s)	29, 65, 80, 310, 614, 775
HgaI	GACGC	2 cut(s)	792, 862
HhaI	GCGC	2 cut(s)	218, 930
Hin1I	GRCGYC	2 cut(s)	216, 803
Hin1II	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1352
Hin6I	GCGC	2 cut(s)	216, 928
HinP1I	GCGC	2 cut(s)	216, 928
HincII	GTYRAC	2 cut(s)	70, 679
HindII	GTYRAC	2 cut(s)	70, 679
HinfI	GANTC	5 cut(s)	76, 281, 292, 738, 974
HpaII	CCGG	6 cut(s)	29, 65, 80, 310, 614, 775
Hpy166II	GTNNAC	5 cut(s)	70, 94, 679, 1179, 1294
Hpy188I	TCNGA	8 cut(s)	107, 291, 402, 496, 772, 1030, 1254, 1481
Hpy188III	TCNNGA	7 cut(s)	269, 275, 671, 742, 877, 1093, 1295
Hpy8I	GTNNAC	5 cut(s)	70, 94, 679, 1179, 1294
Hpy99I	CGWCG	1 cut(s)	188
HpyAV	CCTTC	6 cut(s)	751, 1063, 1239, 1303, 1429, 1477
HpyCH4IV	ACGT	3 cut(s)	1003, 1374, 1451
HpyF10VI	GCNNNNNNNGC	7 cut(s)	14, 164, 262, 832, 863, 902, 1079
HpyF3I	CTNAG	3 cut(s)	245, 552, 884
HpySE526I	ACGT	3 cut(s)	1003, 1374, 1451
Hsp92I	GRCGYC	2 cut(s)	216, 803
Hsp92II	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1352
HspAI	GCGC	2 cut(s)	216, 928
KasI	GGCGCC	1 cut(s)	215
KflI	GGGWCCC	1 cut(s)	83
Kzo9I	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
LmnI	GCTCC	2 cut(s)	659, 1057
Lsp1109I	GCAGC	5 cut(s)	534, 592, 716, 882, 1343
LweI	GCATC	6 cut(s)	274, 295, 451, 500, 892, 1122
MaeI	CTAG	1 cut(s)	516
MaeII	ACGT	3 cut(s)	1003, 1374, 1451
MaeIII	GTNAC	2 cut(s)	370, 442
MalI	GATC	7 cut(s)	140, 204, 273, 536, 1086, 1169, 1251
MboI	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
MboII	GAAGA	6 cut(s)	164, 290, 1141, 1205, 1411, 1432
MfeI	CAATTG	5 cut(s)	260, 588, 618, 1061, 1106
MflI	RGATCY	2 cut(s)	1167, 1249
MhlI	GDGCHC	3 cut(s)	480, 608, 1003
Mly113I	GGCGCC	1 cut(s)	216
MmeI	TCCRAC	3 cut(s)	49, 483, 1286
Mph1103I	ATGCAT	2 cut(s)	907, 1137
MseI	TTAA	5 cut(s)	389, 650, 1013, 1220, 1448
MslI	CAYNNNNRTG	2 cut(s)	850, 994
MspA1I	CMGCKG	1 cut(s)	1082
MspI	CCGG	6 cut(s)	29, 65, 80, 310, 614, 775
MspR9I	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1301
MunI	CAATTG	5 cut(s)	260, 588, 618, 1061, 1106
Mva1269I	GAATGC	2 cut(s)	356, 1102
MvaI	CCWGG	3 cut(s)	693, 893, 1301
MvnI	CGCG	1 cut(s)	188
MwoI	GCNNNNNNNGC	7 cut(s)	14, 164, 262, 832, 863, 902, 1079
NarI	GGCGCC	1 cut(s)	216
NciI	CCSGG	3 cut(s)	30, 81, 311
NdeII	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
NlaIII	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1352
NlaIV	GGNNCC	7 cut(s)	44, 58, 84, 85, 217, 477, 1251
NmuCI	GTSAC	1 cut(s)	442
NsbI	TGCGCA	1 cut(s)	929
NsiI	ATGCAT	2 cut(s)	907, 1137
NspI	RCATGY	1 cut(s)	1276
OliI	CACNNNNGTG	1 cut(s)	850
PctI	GAATGC	2 cut(s)	356, 1102
PfeI	GAWTC	5 cut(s)	76, 281, 292, 738, 974
PflMI	CCANNNNNTGG	2 cut(s)	472, 1325
PinAI	ACCGGT	1 cut(s)	64
PkrI	GCNGC	7 cut(s)	7, 490, 549, 582, 706, 872, 1358
PluTI	GGCGCC	1 cut(s)	219
Ppu21I	YACGTR	1 cut(s)	1004
PpuMI	RGGWCCY	3 cut(s)	43, 83, 1187
Psp1406I	AACGTT	1 cut(s)	1451
Psp5II	RGGWCCY	3 cut(s)	43, 83, 1187
Psp6I	CCWGG	3 cut(s)	691, 891, 1299
PspGI	CCWGG	3 cut(s)	691, 891, 1299
PspN4I	GGNNCC	7 cut(s)	44, 58, 84, 85, 217, 477, 1251
PspPI	GGNCC	8 cut(s)	43, 57, 83, 166, 1018, 1158, 1187, 1198
PspPPI	RGGWCCY	3 cut(s)	43, 83, 1187
PstI	CTGCAG	1 cut(s)	582
PsuI	RGATCY	2 cut(s)	1167, 1249
PvuII	CAGCTG	1 cut(s)	1082
RsaI	GTAC	1 cut(s)	557
RsaNI	GTAC	1 cut(s)	556
RseI	CAYNNNNRTG	2 cut(s)	850, 994
SalI	GTCGAC	1 cut(s)	68
SaqAI	TTAA	5 cut(s)	389, 650, 1013, 1220, 1448
SatI	GCNGC	7 cut(s)	6, 489, 548, 581, 705, 871, 1357
Sau3AI	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
Sau96I	GGNCC	8 cut(s)	43, 57, 83, 166, 1018, 1158, 1187, 1198
ScrFI	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1301
SduI	GDGCHC	3 cut(s)	480, 608, 1003
SfaNI	GCATC	6 cut(s)	274, 295, 451, 500, 892, 1122
SfcI	CTRYAG	1 cut(s)	578
SfiI	GGCCNNNNNGGCC	1 cut(s)	164
SfoI	GGCGCC	1 cut(s)	217
SinI	GGWCC	4 cut(s)	43, 83, 1018, 1187
SmiI	ATTTAAAT	1 cut(s)	1221
SmiMI	CAYNNNNRTG	2 cut(s)	850, 994
SmlI	CTYRAG	1 cut(s)	1172
SmoI	CTYRAG	1 cut(s)	1172
SsiI	CCGC	8 cut(s)	6, 15, 226, 320, 354, 488, 1147, 1287
SspDI	GGCGCC	1 cut(s)	215
SspMI	CTAG	1 cut(s)	516
StyD4I	CCNGG	6 cut(s)	28, 79, 309, 691, 891, 1299
StyI	CCWWGG	1 cut(s)	858
SwaI	ATTTAAAT	1 cut(s)	1221
TaiI	ACGT	3 cut(s)	1006, 1377, 1454
TaqI	TCGA	2 cut(s)	69, 201
TauI	GCSGC	2 cut(s)	8, 491
TfiI	GAWTC	5 cut(s)	76, 281, 292, 738, 974
Tru1I	TTAA	5 cut(s)	389, 650, 1013, 1220, 1448
Tru9I	TTAA	5 cut(s)	389, 650, 1013, 1220, 1448
TscAI	CASTG	1 cut(s)	903
TseFI	GTSAC	1 cut(s)	442
TseI	GCWGC	5 cut(s)	547, 580, 704, 870, 1356
Tsp45I	GTSAC	1 cut(s)	442
TspDTI	ATGAA	7 cut(s)	468, 657, 756, 966, 1109, 1358, 1444
TspGWI	ACGGA	2 cut(s)	10, 1378
TspRI	CASTG	1 cut(s)	903
Van91I	CCANNNNNTGG	2 cut(s)	472, 1325
VpaK11BI	GGWCC	4 cut(s)	43, 83, 1018, 1187
XapI	RAATTY	2 cut(s)	566, 1367
XceI	RCATGY	1 cut(s)	1276
XcmI	CCANNNNNNNNNTGG	1 cut(s)	594
XmiI	GTMKAC	1 cut(s)	69
XspI	CTAG	1 cut(s)	516
Zsp2I	ATGCAT	2 cut(s)	907, 1137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.