Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0002032

Physical Location & Seq

Genomic Coordinates Forward (+)

18304630 .. 18307277

Gene Structure 2648 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG195000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGCCGCAAACACCGCCTCCGTCCAACCGGGTCGCTTTCGGGTCCTAAAGCAAGGGGCCAAACCGGTCGATCCGAATCCGGGTCCGGTGGTTTACTGGATGTTCAGAGACCAACGGGTCAAAGACAACTGGGCGTTGATCCACGCCGTTGAAGAGGCCAACAAGGCCCATGTCCCCGTCGCCGTGGCCTTCAATTTGTTTGATCAGTTTCTTGGCGCCAAAGCCCGCCATTTAGGGTTTATGCTGAGGGGCTTGCGACAATTGCATCCTGATCTTCAAGAAGCGCATCAGATTCCATTTTTTCTTGTCCGGGGAGAAGCGGAGGAGACTATACCCAATTTTATGAGGGAGTGTGGGGCTTCACTTTTGGTAACAGACTTCTCACCTTTAAGGGAGGTGCAGAAATGTAAAGAGGAAATACGCAAGAGGGTTAGTGATTTTGTGACCATACATGAAGTTGATGCCCACAATGTGGTGCCCGTTTGGGCGGCATCGGAGAAGTTGGAGTATAGTGCTAGGACTATAAGGAGTAAGATCAATAAAAGGCTGCCTGAGTACCTTATTGAGTTTCCTACATTGCAGCCACCGATTGCAAAATGGGTGGGTACAAGTCCGGCGATTGATTGGGATGGTCTTATTGATGAAGTTTTAAGGAAAGGAGCAGAAGTTCCTGAAGTTGACTGGTGCGAACCAGGAGAAAAGGCAGCAATGGAAGTTTTGAAGGGTAGCAAAAATGGATTCTTGACAAAAAGGCTGAAGGGTTATTCATCGGACCGGAATAACCCTTTGAAACCAAGAGGGGTGTCTGGTCTTTCTCCATATTTGCATTTTGGGCAAATATCTGCTCAGAGGTGTGCCTTGGAGGCACGCAGTGTCCGAAAACTCAGTCCCCTGGCAGTGGATGCATTTTTAGAGGAGTTGATTGTGCGCAGAGAACTTGCTGACAACTACTGCTTTTACCAGCCTCAATATGATTCATTGCAAGGGGCATGGGAATGGGCACGTAAGACCTTAATGGACCATGCTTCGGATAAGCGAGAACATATTTACACGAGGGAGCAATTGGAGAAGGCACAAACTGCTGATCCTCTCTGGAATGCCTCCCAATGTGAGATGGTTCATTACGGGAAGATGCATGGTTTTCTGCGGATGTATTGGGCAAAAAAGATCCTTGAGTGGACAAGAGGACCCGAAGAAGCCCTTGAAATATCCATATATTTAAATAACAAGTATGAAATGGATGGAAGGGATCCCAATGGATATGTTGGTTGCATGTGGTCAATATGTGGTGTTCACGACCAGGGTTGGAAGGAACGACCAATTTTTGGGAAAATACGTTACATGAACTATGCAGGCTGCAAAAGGAAATTTGACGTGGATGGATACGTTGCCTATGTGCAGAGGCTTGGTGCAACCAAGAAGAGAAAACTCCTACTCAGTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000719 GO:0003674 GO:0003824 GO:0003904 GO:0003913 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006290 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0016829 GO:0016830 GO:0033554 GO:0034641 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051716 GO:0071704 GO:0071949 GO:0090304 GO:0097159 GO:0140097 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_photolyase

Protein Analysis

481

Amino Acids

55.23

Weight (kDa)

8.84

Isoelectric Point (pI)

39.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_photolyase	PF00875	30 - 192	2.3e-30	DNA photolyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12370 AT1G12370 AT1G12370
fragaria_vesca	FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790
malus_domestica	MD04G1078900.v1.1
prunus_persica	Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1
pyrus_communis	pycom04g07070
rosa_chinensis	RchiOBHm_Chr7g0201341 RchiOBHm_Chr7g0201371 RchiOBHm_Chr7g0201391
rosa_laevigata	RLG00000003679
rosa_multiflora	Rmu_co8093880.1_g000001 Rmu_co8322589.1_g000001 Rmu_sc0001469.1_g000010 Rmu_sc0001469.1_g000012 Rmu_sc0013971.1_g000001 Rmu_sc0013971.1_g000004 Rmu_sc0024878.1_g000001 Rmu_sc0024878.1_g000004 Rmu_sc0026181.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226330 Rroxscaffold_3G00255330 Rroxscaffold_3G00255340 Rroxscaffold_3G00255350
rosa_rugosa	Rorug07G0062600 Rorug07G0062700
rosa_samantha	Rh7AG190200 Rh7BG192600 Rh7CG200900 Rh7CG201300 Rh7CG201400 Rh7CG201500 Rh7DG195000 Rh7DG195200
rosa_wichuraiana	Rw7G016680 Rw7G016690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	116
Acc16I	TGCGCA	1 cut(s)	929
AccB1I	GGYRCC	2 cut(s)	215, 475
AccB7I	CCANNNNNTGG	2 cut(s)	472, 1325
AciI	CCGC	6 cut(s)	6, 15, 226, 320, 488, 1147
AclWI	GGATC	6 cut(s)	65, 133, 1079, 1162, 1244, 1257
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	1367
AcuI	CTGAAG	2 cut(s)	693, 776
AcyI	GRCGYC	1 cut(s)	216
AdeI	CACNNNGTG	2 cut(s)	472, 872
AfaI	GTAC	2 cut(s)	557, 607
AfiI	CCNNNNNNNGG	5 cut(s)	80, 472, 898, 1027, 1325
AgeI	ACCGGT	1 cut(s)	64
AgsI	TTSAA	6 cut(s)	152, 193, 278, 721, 790, 1205
AjiI	CACGTC	1 cut(s)	1375
AjnI	CCWGG	3 cut(s)	691, 891, 1299
AloI	GAACNNNNNNTCC	2 cut(s)	651, 683
Alw26I	GTCTC	2 cut(s)	102, 320
AlwI	GGATC	6 cut(s)	65, 133, 1079, 1162, 1244, 1257
AoxI	GGCC	5 cut(s)	3, 57, 156, 165, 186
ApeKI	GCWGC	4 cut(s)	547, 580, 704, 1356
ApoI	RAATTY	1 cut(s)	1367
ArsI	GACNNNNNNTTYG	2 cut(s)	871, 903
AsiGI	ACCGGT	1 cut(s)	64
AspLEI	GCGC	3 cut(s)	218, 286, 930
AspS9I	GGNCC	7 cut(s)	43, 57, 83, 166, 772, 1018, 1187
AsuC2I	CCSGG	3 cut(s)	30, 81, 311
AsuHPI	GGTGA	1 cut(s)	375
AvaII	GGWCC	5 cut(s)	43, 83, 772, 1018, 1187
BaeGI	GKGCMC	2 cut(s)	480, 1003
BamHI	GGATCC	1 cut(s)	1249
BanI	GGYRCC	2 cut(s)	215, 475
BauI	CACGAG	1 cut(s)	1051
BbvCI	CCTCAGC	1 cut(s)	245
BbvI	GCAGC	4 cut(s)	534, 592, 716, 1343
BccI	CCATC	4 cut(s)	623, 1108, 1235, 1373
BceAI	ACGGC	2 cut(s)	131, 167
BciT130I	CCWGG	3 cut(s)	693, 893, 1301
BciVI	GTATCC	1 cut(s)	1376
BclI	TGATCA	1 cut(s)	202
BcnI	CCSGG	3 cut(s)	30, 81, 311
BcoDI	GTCTC	2 cut(s)	102, 320
BfaI	CTAG	1 cut(s)	516
BfoI	RGCGCY	1 cut(s)	219
BfuI	GTATCC	1 cut(s)	1376
BglI	GCCNNNNNGGC	2 cut(s)	164, 863
BisI	GCNGC	6 cut(s)	6, 489, 548, 581, 705, 1357
BlsI	GCNGC	6 cut(s)	7, 490, 549, 582, 706, 1358
Bme1390I	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1301
Bme18I	GGWCC	5 cut(s)	43, 83, 772, 1018, 1187
BmgBI	CACGTC	1 cut(s)	1375
BmgT120I	GGNCC	7 cut(s)	43, 57, 83, 166, 772, 1018, 1187
BmiI	GGNNCC	7 cut(s)	44, 58, 84, 217, 477, 1189, 1251
BmrFI	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1301
BmrI	ACTGGG	1 cut(s)	139
BmsI	GCATC	6 cut(s)	274, 295, 451, 500, 892, 1122
BmuI	ACTGGG	1 cut(s)	139
Bpu10I	CCTNAGC	1 cut(s)	245
BpuEI	CTTGAG	1 cut(s)	1193
BpuMI	CCSGG	3 cut(s)	30, 81, 311
BsaAI	YACGTR	1 cut(s)	1004
BsaBI	GATNNNNATC	1 cut(s)	75
BsaHI	GRCGYC	1 cut(s)	216
BsaI	GGTCTC	1 cut(s)	102
BsaJI	CCNNGG	5 cut(s)	183, 310, 858, 891, 1300
BsaWI	WCCGGW	3 cut(s)	64, 85, 774
BsaXI	ACNNNNNCTCC	3 cut(s)	32, 651, 681
Bsc4I	CCNNNNNNNGG	5 cut(s)	80, 472, 898, 1027, 1325
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	3 cut(s)	101, 134, 686
Bse3DI	GCAATG	3 cut(s)	575, 714, 977
Bse8I	GATNNNNATC	1 cut(s)	75
BseBI	CCWGG	3 cut(s)	693, 893, 1301
BseDI	CCNNGG	5 cut(s)	183, 310, 858, 891, 1300
BseGI	GGATG	7 cut(s)	105, 265, 634, 907, 1155, 1246, 1384
BseJI	GATNNNNATC	1 cut(s)	75
BseLI	CCNNNNNNNGG	5 cut(s)	80, 472, 898, 1027, 1325
BseMI	GCAATG	3 cut(s)	575, 714, 977
BseMII	CTCAG	4 cut(s)	236, 543, 860, 898
BseNI	ACTGG	3 cut(s)	101, 134, 686
BseRI	GAGGAG	2 cut(s)	338, 929
BseSI	GKGCMC	2 cut(s)	480, 1003
BseXI	GCAGC	4 cut(s)	534, 592, 716, 1343
BsgI	GTGCAG	2 cut(s)	419, 1418
Bsh1285I	CGRYCG	1 cut(s)	69
BshFI	GGCC	5 cut(s)	5, 59, 158, 167, 188
BshNI	GGYRCC	2 cut(s)	215, 475
BshTI	ACCGGT	1 cut(s)	64
BsiEI	CGRYCG	1 cut(s)	69
BsiSI	CCGG	7 cut(s)	29, 65, 80, 86, 310, 614, 775
BslFI	GGGAC	2 cut(s)	158, 873
BslI	CCNNNNNNNGG	5 cut(s)	80, 472, 898, 1027, 1325
BsmAI	GTCTC	2 cut(s)	102, 320
BsmFI	GGGAC	2 cut(s)	158, 873
BsmI	GAATGC	1 cut(s)	1102
BsnI	GGCC	5 cut(s)	5, 59, 158, 167, 188
Bso31I	GGTCTC	1 cut(s)	102
Bsp1286I	GDGCHC	2 cut(s)	480, 1003
Bsp143I	GATC	8 cut(s)	70, 138, 202, 271, 534, 1084, 1167, 1249
BspACI	CCGC	6 cut(s)	6, 15, 226, 320, 488, 1147
BspANI	GGCC	5 cut(s)	5, 59, 158, 167, 188
BspCNI	CTCAG	4 cut(s)	237, 544, 859, 897
BspLI	GGNNCC	7 cut(s)	44, 58, 84, 217, 477, 1189, 1251
BspPI	GGATC	6 cut(s)	65, 133, 1079, 1162, 1244, 1257
BspT107I	GGYRCC	2 cut(s)	215, 475
BspTNI	GGTCTC	1 cut(s)	102
BsrDI	GCAATG	3 cut(s)	575, 714, 977
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	3 cut(s)	101, 134, 686
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	5 cut(s)	183, 310, 858, 891, 1300
BssMI	GATC	8 cut(s)	70, 138, 202, 271, 534, 1084, 1167, 1249
BssNI	GRCGYC	1 cut(s)	216
BssSI	CACGAG	1 cut(s)	1051
BssT1I	CCWWGG	1 cut(s)	858
Bst2BI	CACGAG	1 cut(s)	1051
Bst2UI	CCWGG	3 cut(s)	693, 893, 1301
Bst6I	CTCTTC	2 cut(s)	147, 1415
BstACI	GRCGYC	1 cut(s)	216
BstAPI	GCANNNNNTGC	2 cut(s)	902, 1079
BstBAI	YACGTR	1 cut(s)	1004
BstC8I	GCNNGC	4 cut(s)	226, 254, 868, 1354
BstDEI	CTNAG	5 cut(s)	245, 552, 846, 884, 1436
BstDSI	CCRYGG	1 cut(s)	183
BstF5I	GGATG	7 cut(s)	105, 265, 634, 907, 1155, 1246, 1384
BstH2I	RGCGCY	1 cut(s)	219
BstHHI	GCGC	3 cut(s)	218, 286, 930
BstKTI	GATC	8 cut(s)	73, 141, 205, 274, 537, 1087, 1170, 1252
BstMAI	GTCTC	2 cut(s)	102, 320
BstMBI	GATC	8 cut(s)	70, 138, 202, 271, 534, 1084, 1167, 1249
BstMCI	CGRYCG	1 cut(s)	69
BstMWI	GCNNNNNNNGC	7 cut(s)	14, 164, 262, 832, 863, 902, 1079
BstNI	CCWGG	3 cut(s)	693, 893, 1301
BstNSI	RCATGY	1 cut(s)	1276
BstSCI	CCNGG	6 cut(s)	28, 79, 309, 691, 891, 1299
BstSLI	GKGCMC	2 cut(s)	480, 1003
BstV1I	GCAGC	4 cut(s)	534, 592, 716, 1343
BstX2I	RGATCY	2 cut(s)	1167, 1249
BstYI	RGATCY	2 cut(s)	1167, 1249
BsuI	GTATCC	1 cut(s)	1376
BsuRI	GGCC	5 cut(s)	5, 59, 158, 167, 188
BtgI	CCRYGG	1 cut(s)	183
BtrI	CACGTC	1 cut(s)	1375
BtsCI	GGATG	7 cut(s)	105, 265, 634, 907, 1155, 1246, 1384
BtsI	GCAGTG	2 cut(s)	877, 903
BtsIMutI	CAGTG	3 cut(s)	877, 903, 1444
Cac8I	GCNNGC	4 cut(s)	226, 254, 868, 1354
CfoI	GCGC	3 cut(s)	218, 286, 930
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	7 cut(s)	43, 57, 83, 166, 772, 1018, 1187
CpoI	CGGWCCG	1 cut(s)	772
Csp6I	GTAC	2 cut(s)	556, 606
CspAI	ACCGGT	1 cut(s)	64
CspCI	CAANNNNNGTGG	2 cut(s)	582, 617
CspI	CGGWCCG	1 cut(s)	772
CviAII	CATG	7 cut(s)	170, 452, 990, 1022, 1136, 1273, 1342
CviQI	GTAC	2 cut(s)	556, 606
DdeI	CTNAG	5 cut(s)	245, 552, 846, 884, 1436
DinI	GGCGCC	1 cut(s)	217
DpnI	GATC	8 cut(s)	72, 140, 204, 273, 536, 1086, 1169, 1251
DpnII	GATC	8 cut(s)	70, 138, 202, 271, 534, 1084, 1167, 1249
DraI	TTTAAA	1 cut(s)	1221
DraIII	CACNNNGTG	2 cut(s)	472, 872
DrdI	GACNNNNNNGTC	1 cut(s)	116
DseDI	GACNNNNNNGTC	1 cut(s)	116
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	147, 1415
EarI	CTCTTC	2 cut(s)	147, 1415
Eco130I	CCWWGG	1 cut(s)	858
Eco31I	GGTCTC	1 cut(s)	102
Eco47I	GGWCC	5 cut(s)	43, 83, 772, 1018, 1187
Eco57I	CTGAAG	2 cut(s)	693, 776
EcoO109I	RGGNCCY	2 cut(s)	43, 1187
EcoRII	CCWGG	3 cut(s)	691, 891, 1299
EcoT14I	CCWWGG	1 cut(s)	858
EcoT22I	ATGCAT	2 cut(s)	907, 1137
EgeI	GGCGCC	1 cut(s)	217
EheI	GGCGCC	1 cut(s)	217
ErhI	CCWWGG	1 cut(s)	858
FaeI	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1345
FalI	AAGNNNNNCTT	2 cut(s)	1185, 1217
FaqI	GGGAC	2 cut(s)	158, 873
FatI	CATG	7 cut(s)	169, 451, 989, 1021, 1135, 1272, 1341
FauI	CCCGC	1 cut(s)	233
FbaI	TGATCA	1 cut(s)	202
Fnu4HI	GCNGC	6 cut(s)	6, 489, 548, 581, 705, 1357
FokI	GGATG	7 cut(s)	112, 252, 641, 914, 1162, 1253, 1391
Fsp4HI	GCNGC	6 cut(s)	6, 489, 548, 581, 705, 1357
FspBI	CTAG	1 cut(s)	516
FspI	TGCGCA	1 cut(s)	929
GlaI	GCGC	3 cut(s)	217, 285, 929
GluI	GCNGC	6 cut(s)	6, 489, 548, 581, 705, 1357
HaeII	RGCGCY	1 cut(s)	219
HaeIII	GGCC	5 cut(s)	5, 59, 158, 167, 188
HapII	CCGG	7 cut(s)	29, 65, 80, 86, 310, 614, 775
HhaI	GCGC	3 cut(s)	218, 286, 930
Hin1I	GRCGYC	1 cut(s)	216
Hin1II	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1345
Hin6I	GCGC	3 cut(s)	216, 284, 928
HinP1I	GCGC	3 cut(s)	216, 284, 928
HincII	GTYRAC	1 cut(s)	679
HindII	GTYRAC	1 cut(s)	679
HinfI	GANTC	4 cut(s)	76, 292, 738, 974
HpaII	CCGG	7 cut(s)	29, 65, 80, 86, 310, 614, 775
HphI	GGTGA	1 cut(s)	375
Hpy166II	GTNNAC	4 cut(s)	94, 679, 1179, 1294
Hpy188I	TCNGA	8 cut(s)	75, 107, 291, 496, 772, 849, 878, 1030
Hpy188III	TCNNGA	6 cut(s)	269, 278, 671, 742, 1093, 1295
Hpy8I	GTNNAC	4 cut(s)	94, 679, 1179, 1294
Hpy99I	CGWCG	1 cut(s)	182
HpyAV	CCTTC	6 cut(s)	199, 715, 751, 1063, 1239, 1303
HpyCH4IV	ACGT	4 cut(s)	1003, 1336, 1374, 1386
HpyF10VI	GCNNNNNNNGC	7 cut(s)	14, 164, 262, 832, 863, 902, 1079
HpyF3I	CTNAG	5 cut(s)	245, 552, 846, 884, 1436
HpySE526I	ACGT	4 cut(s)	1003, 1336, 1374, 1386
Hsp92I	GRCGYC	1 cut(s)	216
Hsp92II	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1345
HspAI	GCGC	3 cut(s)	216, 284, 928
KasI	GGCGCC	1 cut(s)	215
Ksp22I	TGATCA	1 cut(s)	202
Kzo9I	GATC	8 cut(s)	70, 138, 202, 271, 534, 1084, 1167, 1249
LmnI	GCTCC	2 cut(s)	659, 1057
Lsp1109I	GCAGC	4 cut(s)	534, 592, 716, 1343
LweI	GCATC	6 cut(s)	274, 295, 451, 500, 892, 1122
MaeI	CTAG	1 cut(s)	516
MaeII	ACGT	4 cut(s)	1003, 1336, 1374, 1386
MaeIII	GTNAC	3 cut(s)	370, 442, 1337
MalI	GATC	8 cut(s)	72, 140, 204, 273, 536, 1086, 1169, 1251
MboI	GATC	8 cut(s)	70, 138, 202, 271, 534, 1084, 1167, 1249
MboII	GAAGA	5 cut(s)	164, 266, 1141, 1205, 1432
MfeI	CAATTG	2 cut(s)	260, 1061
MflI	RGATCY	2 cut(s)	1167, 1249
MhlI	GDGCHC	2 cut(s)	480, 1003
MluCI	AATT	6 cut(s)	193, 260, 337, 1061, 1320, 1367
Mly113I	GGCGCC	1 cut(s)	216
MmeI	TCCRAC	3 cut(s)	49, 483, 1286
Mph1103I	ATGCAT	2 cut(s)	907, 1137
MseI	TTAA	4 cut(s)	389, 650, 1013, 1220
MslI	CAYNNNNRTG	1 cut(s)	994
MspI	CCGG	7 cut(s)	29, 65, 80, 86, 310, 614, 775
MspR9I	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1301
MunI	CAATTG	2 cut(s)	260, 1061
Mva1269I	GAATGC	1 cut(s)	1102
MvaI	CCWGG	3 cut(s)	693, 893, 1301
MwoI	GCNNNNNNNGC	7 cut(s)	14, 164, 262, 832, 863, 902, 1079
NarI	GGCGCC	1 cut(s)	216
NciI	CCSGG	3 cut(s)	30, 81, 311
NdeII	GATC	8 cut(s)	70, 138, 202, 271, 534, 1084, 1167, 1249
NlaIII	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1345
NlaIV	GGNNCC	7 cut(s)	44, 58, 84, 217, 477, 1189, 1251
NmuCI	GTSAC	1 cut(s)	442
NsbI	TGCGCA	1 cut(s)	929
NsiI	ATGCAT	2 cut(s)	907, 1137
NspI	RCATGY	1 cut(s)	1276
PcsI	WCGNNNNNNNCGW	1 cut(s)	874
PctI	GAATGC	1 cut(s)	1102
PfeI	GAWTC	4 cut(s)	76, 292, 738, 974
PflMI	CCANNNNNTGG	2 cut(s)	472, 1325
PinAI	ACCGGT	1 cut(s)	64
PkrI	GCNGC	6 cut(s)	7, 490, 549, 582, 706, 1358
PluTI	GGCGCC	1 cut(s)	219
Ppu21I	YACGTR	1 cut(s)	1004
PpuMI	RGGWCCY	2 cut(s)	43, 1187
Psp5II	RGGWCCY	2 cut(s)	43, 1187
Psp6I	CCWGG	3 cut(s)	691, 891, 1299
PspGI	CCWGG	3 cut(s)	691, 891, 1299
PspN4I	GGNNCC	7 cut(s)	44, 58, 84, 217, 477, 1189, 1251
PspPI	GGNCC	7 cut(s)	43, 57, 83, 166, 772, 1018, 1187
PspPPI	RGGWCCY	2 cut(s)	43, 1187
PsuI	RGATCY	2 cut(s)	1167, 1249
RsaI	GTAC	2 cut(s)	557, 607
RsaNI	GTAC	2 cut(s)	556, 606
RseI	CAYNNNNRTG	1 cut(s)	994
Rsr2I	CGGWCCG	1 cut(s)	772
RsrII	CGGWCCG	1 cut(s)	772
SaqAI	TTAA	4 cut(s)	389, 650, 1013, 1220
SatI	GCNGC	6 cut(s)	6, 489, 548, 581, 705, 1357
Sau3AI	GATC	8 cut(s)	70, 138, 202, 271, 534, 1084, 1167, 1249
Sau96I	GGNCC	7 cut(s)	43, 57, 83, 166, 772, 1018, 1187
ScrFI	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1301
SduI	GDGCHC	2 cut(s)	480, 1003
SetI	ASST	9 cut(s)	388, 399, 561, 854, 1006, 1013, 1339, 1377, 1389
SfaNI	GCATC	6 cut(s)	274, 295, 451, 500, 892, 1122
SfiI	GGCCNNNNNGGCC	1 cut(s)	164
SfoI	GGCGCC	1 cut(s)	217
SinI	GGWCC	5 cut(s)	43, 83, 772, 1018, 1187
SmiI	ATTTAAAT	1 cut(s)	1221
SmiMI	CAYNNNNRTG	1 cut(s)	994
SmlI	CTYRAG	1 cut(s)	1172
SmoI	CTYRAG	1 cut(s)	1172
Sse9I	AATT	6 cut(s)	193, 260, 337, 1061, 1320, 1367
SsiI	CCGC	6 cut(s)	6, 15, 226, 320, 488, 1147
SspDI	GGCGCC	1 cut(s)	215
SspMI	CTAG	1 cut(s)	516
StyD4I	CCNGG	6 cut(s)	28, 79, 309, 691, 891, 1299
StyI	CCWWGG	1 cut(s)	858
SwaI	ATTTAAAT	1 cut(s)	1221
TaiI	ACGT	4 cut(s)	1006, 1339, 1377, 1389
TaqI	TCGA	1 cut(s)	69
TasI	AATT	6 cut(s)	193, 260, 337, 1061, 1320, 1367
TauI	GCSGC	2 cut(s)	8, 491
TfiI	GAWTC	4 cut(s)	76, 292, 738, 974
Tru1I	TTAA	4 cut(s)	389, 650, 1013, 1220
Tru9I	TTAA	4 cut(s)	389, 650, 1013, 1220
TscAI	CASTG	3 cut(s)	877, 903, 1444
TseFI	GTSAC	1 cut(s)	442
TseI	GCWGC	4 cut(s)	547, 580, 704, 1356
Tsp45I	GTSAC	1 cut(s)	442
TspDTI	ATGAA	7 cut(s)	468, 657, 756, 966, 1109, 1248, 1358
TspGWI	ACGGA	1 cut(s)	10
TspRI	CASTG	3 cut(s)	877, 903, 1444
Van91I	CCANNNNNTGG	2 cut(s)	472, 1325
VpaK11BI	GGWCC	5 cut(s)	43, 83, 772, 1018, 1187
XapI	RAATTY	1 cut(s)	1367
XceI	RCATGY	1 cut(s)	1276
XspI	CTAG	1 cut(s)	516
Zsp2I	ATGCAT	2 cut(s)	907, 1137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.