Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0002032

Physical Location & Seq

Genomic Coordinates Forward (+)

17026970 .. 17030299

Gene Structure 3330 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG190200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGGCCGCAAACACCGCCTCCGTCCAACCGGGTCGGTTTCGGGTCCTAAAGCAAGGGGCCAAACCGGTCGACCCGAATCCGGGTCCCGTGGTTTACTGGATGTTCAGAGACCAACGGGTCAAAGACAACTGGGCGTTGATCCACGCCGTTGAAGAGGCCAACAAGGCCCATGTCCCGGTCGCCGTGGCCTTCAATTTGTTCGATCAGTTTCTTGGAGCCAAAGCGCGCCATTTAGGGTTTATGCTAAGAGGCTTGCGACAATTGCATCCTGATCTTGAAGAATCGCATCAGATTCCATTTTTTCTTGTCCGGGGAGAAGCGGAGGAGACTATACCCAATTTTGTGAGGGAATGTGGGGCTTCACTATTAGTAACAGATTTTTCACCTTTAAGGGAGGTTCAGAAATGTAAAGAGGAAATCTGCAAGAGGGTTAGTGATTTTGTGACCGTACATGAAGTTGATGCCCACAATGTGGTGCCTGTTTGGGTGGCATCGGAGAAGTTGGAGTATAGTGCTAGGACTATAAGGAGTAAGATCAATAAAAGGCTGCCTGAGTACCTTATTGAATTTCCTACGTTGCAGCCACCGATTGCAAAATGGGTGGGCACAAGTCCCGCGATTGATTGGGATGGTCTTATTGATGAAGTTTTAAGGAAAGGAGCAGAAGTTCCTGAAGTGGACTGGTGCGAACCAGGAGAAAAGGCAGCAATGGAAGTTTTGAAGGGTAGCAAAAATGGATTCTTGACAAAAAGGCTGAAGGGTTATTCATCGGACCGGAATAACCCTTTGAAACCAAGAGGGGTGTCTGGTCTTTCTCCATATTTGCATTTTGGGCAAATATCTGCTCAGAGGTGTGCCTTGGAGGCACGCAGTGTCCGAAAACTCAGTCCCCTGGCAGTGGATGCATTTTTAGAGGAGTTGATTGTGCGCAGAGAACTTGCTGACAACTACTGCTTTTACCAGCCTCAATATGATTCATTGCAAGGGGCATGGGAATGGGCACGTAAGACCTTAATGGACCATGCTTTGGATAAGCGAGAACATATTTACACGAGGGAGCAATTGGAGAAGGCACAAACAGCTGATCCTCTCTGGAATGCCTCCCAATTTGAGATGGTTCATTACGGGAAGATGCATGGTTTTATGCGGATGTATTGGGCAAAAAAGATCCTTGAGTGGACAAGAGGACCTGAAGAAGCCCTTGAAATATCCATATATTTAAATAACAAGTATGAAATAGATGGAAGGGATCCGAATGGATATGTTGGTTGCATGTGGTCAATATGCGGTGTTCACGACCAGGGTTGGAAGGAACGACCAATTTTTGGGAAAATACGTTACATGAACTATGCAGGCTGCAAAAGGAAGTTTGACGTGGACGGATACATTTCCTATGTGAAGAGGCTTGGTGCAACCAAGAAGAGAAAAGCGGAAAGTCTCCTATTCAGTAAAAAGGCCAAGGAACTCTGCAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000719 GO:0003674 GO:0003824 GO:0003904 GO:0003913 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006290 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0016829 GO:0016830 GO:0033554 GO:0034641 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051716 GO:0071704 GO:0071949 GO:0090304 GO:0097159 GO:0140097 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_photolyase

Protein Analysis

491

Amino Acids

56.36

Weight (kDa)

8.86

Isoelectric Point (pI)

39.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_photolyase	PF00875	30 - 192	3.1e-30	DNA photolyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12370 AT1G12370 AT1G12370
fragaria_vesca	FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790
malus_domestica	MD04G1078900.v1.1
prunus_persica	Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1
pyrus_communis	pycom04g07070
rosa_chinensis	RchiOBHm_Chr7g0201341 RchiOBHm_Chr7g0201371 RchiOBHm_Chr7g0201391
rosa_laevigata	RLG00000003679
rosa_multiflora	Rmu_co8093880.1_g000001 Rmu_co8322589.1_g000001 Rmu_sc0001469.1_g000010 Rmu_sc0001469.1_g000012 Rmu_sc0013971.1_g000001 Rmu_sc0013971.1_g000004 Rmu_sc0024878.1_g000001 Rmu_sc0024878.1_g000004 Rmu_sc0026181.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226330 Rroxscaffold_3G00255330 Rroxscaffold_3G00255340 Rroxscaffold_3G00255350
rosa_rugosa	Rorug07G0062600 Rorug07G0062700
rosa_samantha	Rh7AG190200 Rh7BG192600 Rh7CG200900 Rh7CG201300 Rh7CG201400 Rh7CG201500 Rh7DG195000 Rh7DG195200
rosa_wichuraiana	Rw7G016680 Rw7G016690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	116
Acc16I	TGCGCA	1 cut(s)	929
AccB1I	GGYRCC	1 cut(s)	475
AccB7I	CCANNNNNTGG	3 cut(s)	472, 1027, 1325
AccI	GTMKAC	1 cut(s)	69
AccII	CGCG	2 cut(s)	226, 617
AciI	CCGC	7 cut(s)	6, 15, 320, 615, 1147, 1287, 1430
AclWI	GGATC	5 cut(s)	133, 1079, 1162, 1244, 1257
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	566
AcuI	CTGAAG	3 cut(s)	693, 776, 1212
AdeI	CACNNNGTG	2 cut(s)	472, 872
AfaI	GTAC	2 cut(s)	450, 557
AfiI	CCNNNNNNNGG	7 cut(s)	79, 80, 175, 472, 898, 1027, 1325
AgeI	ACCGGT	1 cut(s)	64
AgsI	TTSAA	7 cut(s)	152, 193, 278, 566, 721, 790, 1205
AjiI	CACGTC	1 cut(s)	1375
AjnI	CCWGG	3 cut(s)	691, 891, 1299
AloI	GAACNNNNNNTCC	2 cut(s)	651, 683
AluBI	AGCT	1 cut(s)	1082
AluI	AGCT	1 cut(s)	1082
Alw26I	GTCTC	3 cut(s)	102, 320, 1442
AlwI	GGATC	5 cut(s)	133, 1079, 1162, 1244, 1257
AoxI	GGCC	6 cut(s)	3, 57, 156, 165, 186, 1455
ApeKI	GCWGC	4 cut(s)	547, 580, 704, 1356
ApoI	RAATTY	1 cut(s)	566
ArsI	GACNNNNNNTTYG	2 cut(s)	871, 903
AsiGI	ACCGGT	1 cut(s)	64
AspLEI	GCGC	3 cut(s)	226, 228, 930
AspS9I	GGNCC	7 cut(s)	43, 57, 83, 166, 772, 1018, 1187
AsuC2I	CCSGG	4 cut(s)	30, 81, 176, 311
AsuHPI	GGTGA	1 cut(s)	375
AvaII	GGWCC	5 cut(s)	43, 83, 772, 1018, 1187
BaeGI	GKGCMC	2 cut(s)	608, 1003
BamHI	GGATCC	1 cut(s)	1249
BanI	GGYRCC	1 cut(s)	475
BauI	CACGAG	1 cut(s)	1051
BbvI	GCAGC	4 cut(s)	534, 592, 716, 1343
BccI	CCATC	3 cut(s)	623, 1108, 1235
BceAI	ACGGC	2 cut(s)	131, 167
BciT130I	CCWGG	3 cut(s)	693, 893, 1301
BciVI	GTATCC	1 cut(s)	1376
BcnI	CCSGG	4 cut(s)	30, 81, 176, 311
BcoDI	GTCTC	3 cut(s)	102, 320, 1442
BfaI	CTAG	1 cut(s)	516
BfmI	CTRYAG	1 cut(s)	1468
BfuI	GTATCC	1 cut(s)	1376
BglI	GCCNNNNNGGC	2 cut(s)	164, 863
BisI	GCNGC	5 cut(s)	6, 548, 581, 705, 1357
BlsI	GCNGC	5 cut(s)	7, 549, 582, 706, 1358
Bme1390I	CCNGG	7 cut(s)	30, 81, 176, 311, 693, 893, 1301
Bme18I	GGWCC	5 cut(s)	43, 83, 772, 1018, 1187
BmgBI	CACGTC	1 cut(s)	1375
BmgT120I	GGNCC	7 cut(s)	43, 57, 83, 166, 772, 1018, 1187
BmiI	GGNNCC	7 cut(s)	44, 58, 84, 85, 217, 477, 1251
BmrFI	CCNGG	7 cut(s)	30, 81, 176, 311, 693, 893, 1301
BmrI	ACTGGG	1 cut(s)	139
BmsI	GCATC	6 cut(s)	274, 295, 451, 500, 892, 1122
BmuI	ACTGGG	1 cut(s)	139
BpuEI	CTTGAG	1 cut(s)	1193
BpuMI	CCSGG	4 cut(s)	30, 81, 176, 311
BsaAI	YACGTR	1 cut(s)	1004
BsaI	GGTCTC	1 cut(s)	102
BsaJI	CCNNGG	7 cut(s)	87, 183, 310, 858, 891, 1300, 1458
BsaWI	WCCGGW	2 cut(s)	64, 774
BsaXI	ACNNNNNCTCC	3 cut(s)	32, 651, 681
Bsc4I	CCNNNNNNNGG	7 cut(s)	79, 80, 175, 472, 898, 1027, 1325
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	3 cut(s)	101, 134, 686
Bse3DI	GCAATG	2 cut(s)	714, 977
BseBI	CCWGG	3 cut(s)	693, 893, 1301
BseDI	CCNNGG	7 cut(s)	87, 183, 310, 858, 891, 1300, 1458
BseGI	GGATG	5 cut(s)	105, 265, 634, 907, 1155
BseLI	CCNNNNNNNGG	7 cut(s)	79, 80, 175, 472, 898, 1027, 1325
BseMI	GCAATG	2 cut(s)	714, 977
BseMII	CTCAG	3 cut(s)	543, 860, 898
BseNI	ACTGG	3 cut(s)	101, 134, 686
BsePI	GCGCGC	1 cut(s)	224
BseRI	GAGGAG	2 cut(s)	338, 929
BseSI	GKGCMC	2 cut(s)	608, 1003
BseXI	GCAGC	4 cut(s)	534, 592, 716, 1343
Bsh1236I	CGCG	2 cut(s)	226, 617
Bsh1285I	CGRYCG	2 cut(s)	69, 180
BshFI	GGCC	6 cut(s)	5, 59, 158, 167, 188, 1457
BshNI	GGYRCC	1 cut(s)	475
BshTI	ACCGGT	1 cut(s)	64
BsiEI	CGRYCG	2 cut(s)	69, 180
BsiSI	CCGG	6 cut(s)	29, 65, 80, 176, 310, 775
BslFI	GGGAC	4 cut(s)	69, 158, 597, 873
BslI	CCNNNNNNNGG	7 cut(s)	79, 80, 175, 472, 898, 1027, 1325
BsmAI	GTCTC	3 cut(s)	102, 320, 1442
BsmFI	GGGAC	4 cut(s)	69, 158, 597, 873
BsmI	GAATGC	1 cut(s)	1102
BsnI	GGCC	6 cut(s)	5, 59, 158, 167, 188, 1457
Bso31I	GGTCTC	1 cut(s)	102
Bsp1286I	GDGCHC	2 cut(s)	608, 1003
Bsp143I	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
BspACI	CCGC	7 cut(s)	6, 15, 320, 615, 1147, 1287, 1430
BspANI	GGCC	6 cut(s)	5, 59, 158, 167, 188, 1457
BspCNI	CTCAG	3 cut(s)	544, 859, 897
BspFNI	CGCG	2 cut(s)	226, 617
BspLI	GGNNCC	7 cut(s)	44, 58, 84, 85, 217, 477, 1251
BspMAI	CTGCAG	1 cut(s)	1472
BspPI	GGATC	5 cut(s)	133, 1079, 1162, 1244, 1257
BspT107I	GGYRCC	1 cut(s)	475
BspTNI	GGTCTC	1 cut(s)	102
BsrDI	GCAATG	2 cut(s)	714, 977
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	3 cut(s)	101, 134, 686
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	7 cut(s)	87, 183, 310, 858, 891, 1300, 1458
BssHII	GCGCGC	1 cut(s)	224
BssMI	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
BssSI	CACGAG	1 cut(s)	1051
BssT1I	CCWWGG	2 cut(s)	858, 1458
Bst2BI	CACGAG	1 cut(s)	1051
Bst2UI	CCWGG	3 cut(s)	693, 893, 1301
Bst4CI	ACNGT	1 cut(s)	448
Bst6I	CTCTTC	3 cut(s)	147, 1394, 1415
BstAPI	GCANNNNNTGC	1 cut(s)	902
BstBAI	YACGTR	1 cut(s)	1004
BstC8I	GCNNGC	4 cut(s)	226, 254, 868, 1354
BstDEI	CTNAG	4 cut(s)	245, 552, 846, 884
BstDSI	CCRYGG	2 cut(s)	87, 183
BstF5I	GGATG	5 cut(s)	105, 265, 634, 907, 1155
BstFNI	CGCG	2 cut(s)	226, 617
BstHHI	GCGC	3 cut(s)	226, 228, 930
BstKTI	GATC	7 cut(s)	141, 205, 274, 537, 1087, 1170, 1252
BstMAI	GTCTC	3 cut(s)	102, 320, 1442
BstMBI	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
BstMCI	CGRYCG	2 cut(s)	69, 180
BstMWI	GCNNNNNNNGC	7 cut(s)	14, 164, 262, 832, 863, 902, 1079
BstNI	CCWGG	3 cut(s)	693, 893, 1301
BstNSI	RCATGY	1 cut(s)	1276
BstSCI	CCNGG	7 cut(s)	28, 79, 174, 309, 691, 891, 1299
BstSFI	CTRYAG	1 cut(s)	1468
BstSLI	GKGCMC	2 cut(s)	608, 1003
BstUI	CGCG	2 cut(s)	226, 617
BstV1I	GCAGC	4 cut(s)	534, 592, 716, 1343
BstX2I	RGATCY	2 cut(s)	1167, 1249
BstYI	RGATCY	2 cut(s)	1167, 1249
BsuI	GTATCC	1 cut(s)	1376
BsuRI	GGCC	6 cut(s)	5, 59, 158, 167, 188, 1457
BtgI	CCRYGG	2 cut(s)	87, 183
BtrI	CACGTC	1 cut(s)	1375
BtsCI	GGATG	5 cut(s)	105, 265, 634, 907, 1155
BtsI	GCAGTG	2 cut(s)	877, 903
BtsIMutI	CAGTG	2 cut(s)	877, 903
Cac8I	GCNNGC	4 cut(s)	226, 254, 868, 1354
CfoI	GCGC	3 cut(s)	226, 228, 930
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	7 cut(s)	43, 57, 83, 166, 772, 1018, 1187
CpoI	CGGWCCG	1 cut(s)	772
Csp6I	GTAC	2 cut(s)	449, 556
CspAI	ACCGGT	1 cut(s)	64
CspCI	CAANNNNNGTGG	2 cut(s)	582, 617
CspI	CGGWCCG	1 cut(s)	772
CviAII	CATG	7 cut(s)	170, 452, 990, 1022, 1136, 1273, 1342
CviQI	GTAC	2 cut(s)	449, 556
DdeI	CTNAG	4 cut(s)	245, 552, 846, 884
DpnI	GATC	7 cut(s)	140, 204, 273, 536, 1086, 1169, 1251
DpnII	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
DraI	TTTAAA	1 cut(s)	1221
DraIII	CACNNNGTG	2 cut(s)	472, 872
DrdI	GACNNNNNNGTC	1 cut(s)	116
DseDI	GACNNNNNNGTC	1 cut(s)	116
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	3 cut(s)	147, 1394, 1415
EarI	CTCTTC	3 cut(s)	147, 1394, 1415
Eco130I	CCWWGG	2 cut(s)	858, 1458
Eco31I	GGTCTC	1 cut(s)	102
Eco47I	GGWCC	5 cut(s)	43, 83, 772, 1018, 1187
Eco57I	CTGAAG	3 cut(s)	693, 776, 1212
EcoO109I	RGGNCCY	3 cut(s)	43, 83, 1187
EcoRII	CCWGG	3 cut(s)	691, 891, 1299
EcoT14I	CCWWGG	2 cut(s)	858, 1458
EcoT22I	ATGCAT	2 cut(s)	907, 1137
ErhI	CCWWGG	2 cut(s)	858, 1458
FaeI	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1345
FalI	AAGNNNNNCTT	2 cut(s)	1185, 1217
FaqI	GGGAC	4 cut(s)	69, 158, 597, 873
FatI	CATG	7 cut(s)	169, 451, 989, 1021, 1135, 1272, 1341
FauI	CCCGC	1 cut(s)	622
FblI	GTMKAC	1 cut(s)	69
Fnu4HI	GCNGC	5 cut(s)	6, 548, 581, 705, 1357
FokI	GGATG	5 cut(s)	112, 252, 641, 914, 1162
Fsp4HI	GCNGC	5 cut(s)	6, 548, 581, 705, 1357
FspBI	CTAG	1 cut(s)	516
FspI	TGCGCA	1 cut(s)	929
GlaI	GCGC	3 cut(s)	225, 227, 929
GluI	GCNGC	5 cut(s)	6, 548, 581, 705, 1357
HaeIII	GGCC	6 cut(s)	5, 59, 158, 167, 188, 1457
HapII	CCGG	6 cut(s)	29, 65, 80, 176, 310, 775
HhaI	GCGC	3 cut(s)	226, 228, 930
Hin1II	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1345
Hin6I	GCGC	3 cut(s)	224, 226, 928
HinP1I	GCGC	3 cut(s)	224, 226, 928
HincII	GTYRAC	1 cut(s)	70
HindII	GTYRAC	1 cut(s)	70
HinfI	GANTC	5 cut(s)	76, 281, 292, 738, 974
HpaII	CCGG	6 cut(s)	29, 65, 80, 176, 310, 775
HphI	GGTGA	1 cut(s)	375
Hpy166II	GTNNAC	6 cut(s)	70, 94, 679, 1179, 1294, 1378
Hpy188I	TCNGA	8 cut(s)	107, 291, 402, 496, 772, 849, 878, 1254
Hpy188III	TCNNGA	6 cut(s)	269, 275, 671, 742, 1093, 1295
Hpy8I	GTNNAC	6 cut(s)	70, 94, 679, 1179, 1294, 1378
HpyAV	CCTTC	6 cut(s)	199, 715, 751, 1063, 1239, 1303
HpyCH4III	ACNGT	1 cut(s)	448
HpyCH4IV	ACGT	4 cut(s)	575, 1003, 1336, 1374
HpyF10VI	GCNNNNNNNGC	7 cut(s)	14, 164, 262, 832, 863, 902, 1079
HpyF3I	CTNAG	4 cut(s)	245, 552, 846, 884
HpySE526I	ACGT	4 cut(s)	575, 1003, 1336, 1374
Hsp92II	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1345
HspAI	GCGC	3 cut(s)	224, 226, 928
KflI	GGGWCCC	1 cut(s)	83
Kzo9I	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
LmnI	GCTCC	3 cut(s)	215, 659, 1057
Lsp1109I	GCAGC	4 cut(s)	534, 592, 716, 1343
LweI	GCATC	6 cut(s)	274, 295, 451, 500, 892, 1122
MaeI	CTAG	1 cut(s)	516
MaeII	ACGT	4 cut(s)	575, 1003, 1336, 1374
MaeIII	GTNAC	3 cut(s)	370, 442, 1337
MalI	GATC	7 cut(s)	140, 204, 273, 536, 1086, 1169, 1251
MboI	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
MboII	GAAGA	6 cut(s)	164, 290, 1141, 1205, 1411, 1432
MfeI	CAATTG	2 cut(s)	260, 1061
MflI	RGATCY	2 cut(s)	1167, 1249
MhlI	GDGCHC	2 cut(s)	608, 1003
MluCI	AATT	7 cut(s)	193, 260, 337, 566, 1061, 1106, 1320
MmeI	TCCRAC	3 cut(s)	49, 483, 1286
Mph1103I	ATGCAT	2 cut(s)	907, 1137
MseI	TTAA	4 cut(s)	389, 650, 1013, 1220
MslI	CAYNNNNRTG	1 cut(s)	994
MspA1I	CMGCKG	1 cut(s)	1082
MspI	CCGG	6 cut(s)	29, 65, 80, 176, 310, 775
MspR9I	CCNGG	7 cut(s)	30, 81, 176, 311, 693, 893, 1301
MunI	CAATTG	2 cut(s)	260, 1061
Mva1269I	GAATGC	1 cut(s)	1102
MvaI	CCWGG	3 cut(s)	693, 893, 1301
MvnI	CGCG	2 cut(s)	226, 617
MwoI	GCNNNNNNNGC	7 cut(s)	14, 164, 262, 832, 863, 902, 1079
NciI	CCSGG	4 cut(s)	30, 81, 176, 311
NdeII	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
NlaIII	CATG	7 cut(s)	173, 455, 993, 1025, 1139, 1276, 1345
NlaIV	GGNNCC	7 cut(s)	44, 58, 84, 85, 217, 477, 1251
NmuCI	GTSAC	1 cut(s)	442
NsbI	TGCGCA	1 cut(s)	929
NsiI	ATGCAT	2 cut(s)	907, 1137
NspI	RCATGY	1 cut(s)	1276
PauI	GCGCGC	1 cut(s)	224
PcsI	WCGNNNNNNNCGW	1 cut(s)	874
PctI	GAATGC	1 cut(s)	1102
PfeI	GAWTC	5 cut(s)	76, 281, 292, 738, 974
PflMI	CCANNNNNTGG	3 cut(s)	472, 1027, 1325
PinAI	ACCGGT	1 cut(s)	64
PkrI	GCNGC	5 cut(s)	7, 549, 582, 706, 1358
Ppu21I	YACGTR	1 cut(s)	1004
PpuMI	RGGWCCY	3 cut(s)	43, 83, 1187
Psp5II	RGGWCCY	3 cut(s)	43, 83, 1187
Psp6I	CCWGG	3 cut(s)	691, 891, 1299
PspGI	CCWGG	3 cut(s)	691, 891, 1299
PspN4I	GGNNCC	7 cut(s)	44, 58, 84, 85, 217, 477, 1251
PspPI	GGNCC	7 cut(s)	43, 57, 83, 166, 772, 1018, 1187
PspPPI	RGGWCCY	3 cut(s)	43, 83, 1187
PstI	CTGCAG	1 cut(s)	1472
PsuI	RGATCY	2 cut(s)	1167, 1249
PteI	GCGCGC	1 cut(s)	224
PvuII	CAGCTG	1 cut(s)	1082
RsaI	GTAC	2 cut(s)	450, 557
RsaNI	GTAC	2 cut(s)	449, 556
RseI	CAYNNNNRTG	1 cut(s)	994
Rsr2I	CGGWCCG	1 cut(s)	772
RsrII	CGGWCCG	1 cut(s)	772
SalI	GTCGAC	1 cut(s)	68
SaqAI	TTAA	4 cut(s)	389, 650, 1013, 1220
SatI	GCNGC	5 cut(s)	6, 548, 581, 705, 1357
Sau3AI	GATC	7 cut(s)	138, 202, 271, 534, 1084, 1167, 1249
Sau96I	GGNCC	7 cut(s)	43, 57, 83, 166, 772, 1018, 1187
ScrFI	CCNGG	7 cut(s)	30, 81, 176, 311, 693, 893, 1301
SduI	GDGCHC	2 cut(s)	608, 1003
SfaNI	GCATC	6 cut(s)	274, 295, 451, 500, 892, 1122
SfcI	CTRYAG	1 cut(s)	1468
SfiI	GGCCNNNNNGGCC	1 cut(s)	164
SinI	GGWCC	5 cut(s)	43, 83, 772, 1018, 1187
SmiI	ATTTAAAT	1 cut(s)	1221
SmiMI	CAYNNNNRTG	1 cut(s)	994
SmlI	CTYRAG	1 cut(s)	1172
SmoI	CTYRAG	1 cut(s)	1172
Sse9I	AATT	7 cut(s)	193, 260, 337, 566, 1061, 1106, 1320
SsiI	CCGC	7 cut(s)	6, 15, 320, 615, 1147, 1287, 1430
SspMI	CTAG	1 cut(s)	516
StyD4I	CCNGG	7 cut(s)	28, 79, 174, 309, 691, 891, 1299
StyI	CCWWGG	2 cut(s)	858, 1458
SwaI	ATTTAAAT	1 cut(s)	1221
TaaI	ACNGT	1 cut(s)	448
TaiI	ACGT	4 cut(s)	578, 1006, 1339, 1377
TaqI	TCGA	2 cut(s)	69, 201
TasI	AATT	7 cut(s)	193, 260, 337, 566, 1061, 1106, 1320
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	5 cut(s)	76, 281, 292, 738, 974
Tru1I	TTAA	4 cut(s)	389, 650, 1013, 1220
Tru9I	TTAA	4 cut(s)	389, 650, 1013, 1220
TscAI	CASTG	2 cut(s)	877, 903
TseFI	GTSAC	1 cut(s)	442
TseI	GCWGC	4 cut(s)	547, 580, 704, 1356
Tsp45I	GTSAC	1 cut(s)	442
TspDTI	ATGAA	7 cut(s)	468, 657, 756, 966, 1109, 1248, 1358
TspGWI	ACGGA	2 cut(s)	10, 1395
TspRI	CASTG	2 cut(s)	877, 903
Van91I	CCANNNNNTGG	3 cut(s)	472, 1027, 1325
VpaK11BI	GGWCC	5 cut(s)	43, 83, 772, 1018, 1187
XapI	RAATTY	1 cut(s)	566
XceI	RCATGY	1 cut(s)	1276
XmiI	GTMKAC	1 cut(s)	69
XspI	CTAG	1 cut(s)	516
Zsp2I	ATGCAT	2 cut(s)	907, 1137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.